RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SMIM8Q96KF7 97 aa11.54□□□□□ -0.56
MRPL55-220ENST00000411464 PARD6GQ9BYG4 376 aaPredicted RBP11.54□□□□□ -0.56
MRPL55-220ENST00000411464 MGAT4CQ9UBM8 478 aa11.54□□□□□ -0.56
MRPL55-220ENST00000411464 EPM2AB3EWF7 344 aa11.53□□□□□ -0.56
MRPL55-220ENST00000411464 K7EPK0 472 aa11.53□□□□□ -0.56
MRPL55-220ENST00000411464 GOSR2O14653 212 aa11.53□□□□□ -0.56
MRPL55-220ENST00000411464 LINC00305Q7Z4B0 112 aa11.53□□□□□ -0.56
MRPL55-220ENST00000411464 BPIFA4PQ86YQ2 179 aa11.53□□□□□ -0.56
MRPL55-220ENST00000411464 PGPEP1Q9NXJ5 209 aa11.53□□□□□ -0.56
MRPL55-220ENST00000411464 FNDC10F2Z333 226 aa11.52□□□□□ -0.57
MRPL55-220ENST00000411464 J3KRW8 73 aa11.52□□□□□ -0.57
MRPL55-220ENST00000411464 METTL15P1P0C7V9 234 aa11.52□□□□□ -0.57
MRPL55-220ENST00000411464 UBE2MP61081 183 aaKnown RBP11.52□□□□□ -0.57
MRPL55-220ENST00000411464 SLC38A11Q08AI6 406 aa11.52□□□□□ -0.57
MRPL55-220ENST00000411464 MZT2BQ6NZ67 158 aa11.52□□□□□ -0.57
MRPL55-220ENST00000411464 ZNF546Q86UE3 836 aa11.52□□□□□ -0.57
MRPL55-220ENST00000411464 TMPRSS5Q9H3S3 457 aa11.52□□□□□ -0.57
MRPL55-220ENST00000411464 DNAH5Q8TE73 4624 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 TRGV2A0A075B6R0 118 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 TRAV12-3A0A0B4J271 114 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 PRAC2D3DTV9 90 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 EREGO14944 169 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 COX7A2P2O60397 106 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 CCNKO75909 580 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 NDUFB6O95139 128 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 LEPP41159 167 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 LINC00315P59091 139 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 DEFA1P59665 94 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 DEFA3P59666 94 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 DAZ2Q13117 558 aaKnown RBP11.51□□□□□ -0.57
MRPL55-220ENST00000411464 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 PYGO2Q9BRQ0 406 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 PXMP4Q9Y6I8 212 aa11.51□□□□□ -0.57
MRPL55-220ENST00000411464 APOBP04114 4563 aaKnown RBP11.5□□□□□ -0.57
MRPL55-220ENST00000411464 C9orf170A2RU37 121 aa11.5□□□□□ -0.57
MRPL55-220ENST00000411464 H3BTX0 84 aa11.5□□□□□ -0.57
MRPL55-220ENST00000411464 AGPAT2O15120 278 aa11.5□□□□□ -0.57
MRPL55-220ENST00000411464 Q6ZTI0 123 aa11.5□□□□□ -0.57
MRPL55-220ENST00000411464 FLVCR2Q9UPI3 526 aa11.5□□□□□ -0.57
MRPL55-220ENST00000411464 A0A096LPF7 62 aa11.49□□□□□ -0.57
MRPL55-220ENST00000411464 FAM240BA0A1B0GVZ2 78 aa11.49□□□□□ -0.57
MRPL55-220ENST00000411464 SLC17A3O00476 420 aa11.49□□□□□ -0.57
MRPL55-220ENST00000411464 CT45A10P0DMU9 189 aa11.49□□□□□ -0.57
MRPL55-220ENST00000411464 C4orf46Q504U0 113 aa11.49□□□□□ -0.57
MRPL55-220ENST00000411464 ENKURQ8TC29 256 aa11.49□□□□□ -0.57
MRPL55-220ENST00000411464 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
MRPL55-220ENST00000411464 ODF3Q96PU9 254 aa11.49□□□□□ -0.57
MRPL55-220ENST00000411464 SIVA1O15304 175 aa11.48□□□□□ -0.57
MRPL55-220ENST00000411464 TSC22D2O75157 780 aa11.48□□□□□ -0.57
MRPL55-220ENST00000411464 SCGB1D2O95969 90 aa11.48□□□□□ -0.57
MRPL55-220ENST00000411464 TCRBP04435 133 aa11.48□□□□□ -0.57
MRPL55-220ENST00000411464 TAS2R30P59541 319 aa11.48□□□□□ -0.57
MRPL55-220ENST00000411464 C10orf113Q5VZT2 155 aa11.48□□□□□ -0.57
MRPL55-220ENST00000411464 ZBTB8BQ8NAP8 495 aaPredicted RBP11.48□□□□□ -0.57
MRPL55-220ENST00000411464 ZNF431Q8TF32 576 aaPredicted RBP11.48□□□□□ -0.57
MRPL55-220ENST00000411464 HERC1Q15751 4861 aa11.48□□□□□ -0.57
MRPL55-220ENST00000411464 H3BQ15 152 aa11.47□□□□□ -0.57
MRPL55-220ENST00000411464 INAFM2P0DMQ5 153 aa11.47□□□□□ -0.57
MRPL55-220ENST00000411464 IGLC2P0DOY2 106 aa11.47□□□□□ -0.57
MRPL55-220ENST00000411464 OPCMLQ14982 345 aa11.47□□□□□ -0.57
MRPL55-220ENST00000411464 GUK1Q16774 197 aa11.47□□□□□ -0.57
MRPL55-220ENST00000411464 Q6ZRN7 208 aaPredicted RBP11.47□□□□□ -0.57
MRPL55-220ENST00000411464 NRARPQ7Z6K4 114 aa11.47□□□□□ -0.57
MRPL55-220ENST00000411464 ZNF680Q8NEM1 530 aa11.47□□□□□ -0.57
MRPL55-220ENST00000411464 TMEM37Q8WXS4 190 aa11.47□□□□□ -0.57
MRPL55-220ENST00000411464 SAT2Q96F10 170 aaPredicted RBP11.47□□□□□ -0.57
MRPL55-220ENST00000411464 GGACTQ9BVM4 153 aa11.47□□□□□ -0.57
MRPL55-220ENST00000411464 C20orf85Q9H1P6 137 aa11.47□□□□□ -0.57
MRPL55-220ENST00000411464 TRAV6A0A075B6T7 132 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 TRGV1A0A0A0MS02 117 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 NPIPB6E9PJ23 425 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 SLC25A5P05141 298 aaKnown RBP11.46□□□□□ -0.57
MRPL55-220ENST00000411464 ERVFC1-1P60608 527 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 IAH1Q2TAA2 248 aaPredicted RBP11.46□□□□□ -0.57
MRPL55-220ENST00000411464 MORN5Q5VZ52 161 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 CDPF1Q6NVV7 123 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 Q6ZRG5 221 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 LYPD1Q8N2G4 141 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 C18orf15Q96N68 181 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 DNAJC4Q9NNZ3 241 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 GSN-AS1Q9NRJ2 163 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 NUDT15Q9NV35 164 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 GSKIPQ9P0R6 139 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 FUT9Q9Y231 359 aa11.46□□□□□ -0.57
MRPL55-220ENST00000411464 NXPH4O95158 308 aa11.45□□□□□ -0.58
MRPL55-220ENST00000411464 H2AFB2P0C5Z0 115 aa11.45□□□□□ -0.58
MRPL55-220ENST00000411464 ARL16Q0P5N6 197 aa11.45□□□□□ -0.58
MRPL55-220ENST00000411464 RAB31Q13636 194 aa11.45□□□□□ -0.58
MRPL55-220ENST00000411464 MGST2Q99735 147 aa11.45□□□□□ -0.58
MRPL55-220ENST00000411464 C7orf71A4D174 169 aa11.44□□□□□ -0.58
MRPL55-220ENST00000411464 PAX4O43316 350 aa11.44□□□□□ -0.58
MRPL55-220ENST00000411464 PTTG1O95997 202 aa11.44□□□□□ -0.58
MRPL55-220ENST00000411464 IFNA5P01569 189 aa11.44□□□□□ -0.58
MRPL55-220ENST00000411464 OR4E1P0C645 316 aa11.44□□□□□ -0.58
MRPL55-220ENST00000411464 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
MRPL55-220ENST00000411464 XGP55808 180 aa11.44□□□□□ -0.58
MRPL55-220ENST00000411464 ICOSQ9Y6W8 199 aa11.44□□□□□ -0.58
MRPL55-220ENST00000411464 TRAV5A0A0B4J249 113 aa11.43□□□□□ -0.58
MRPL55-220ENST00000411464 C7orf66A4D0T2 115 aa11.43□□□□□ -0.58
MRPL55-220ENST00000411464 ZNF324O75467 553 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms