RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 HYLS1Q96M11 299 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 NPCDR1Q9BY65 106 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 TRIM4Q9C037 500 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 STARD9Q9P2P6 4700 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 C2CD3Q4AC94 2353 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 SVEP1Q4LDE5 3571 aa-0.83□□□□□ -2.54
RNU4-55P-201ENST00000410731 TRAV4A0A0B4J268 109 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 TAX1BP3O14907 124 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 PDE6GP18545 87 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 UBE2BP63146 152 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 HIST1H3AP68431 136 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 H3F3AP84243 136 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 PATE2Q6UY27 113 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 ZCCHC23Q6ZST2 131 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 IMUPQ9GZP8 106 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 PARVBQ9HBI1 364 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 CHD8Q9HCK8 2581 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 COL24A1Q17RW2 1714 aa-0.84□□□□□ -2.54
RNU4-55P-201ENST00000410731 PTPRDP23468 1912 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 MYLKQ15746 1914 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 TRBV19A0A075B6N1 114 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 A0A0J9YY99 117 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 PRORSD1PA6NEY8 169 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 PIK3C2GO75747 1445 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 SPRR2BP35325 72 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 ETV6P41212 452 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 EDDM3AQ14507 147 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 IMPG1Q17R60 797 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 GLYATL3Q5SZD4 288 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 IDO2Q6ZQW0 420 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 CHCHD1Q96BP2 118 aaKnown RBP-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 MIA2Q96PC5 1412 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 PRELID3BQ9Y3B1 194 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 UBR4Q5T4S7 5183 aa-0.85□□□□□ -2.55
RNU4-55P-201ENST00000410731 UNC13BO14795 1591 aa-0.86□□□□□ -2.55
RNU4-55P-201ENST00000410731 FAM159BA6NKW6 160 aa-0.86□□□□□ -2.55
RNU4-55P-201ENST00000410731 GGCTO75223 188 aaKnown RBP-0.86□□□□□ -2.55
RNU4-55P-201ENST00000410731 MT4P47944 62 aa-0.86□□□□□ -2.55
RNU4-55P-201ENST00000410731 LIMD2Q9BT23 127 aa-0.86□□□□□ -2.55
RNU4-55P-201ENST00000410731 PARD6GQ9BYG4 376 aaPredicted RBP-0.86□□□□□ -2.55
RNU4-55P-201ENST00000410731 MXRA5Q9NR99 2828 aa-0.86□□□□□ -2.55
RNU4-55P-201ENST00000410731 PRKDCP78527 4128 aaKnown RBP-0.86□□□□□ -2.55
RNU4-55P-201ENST00000410731 TANC1Q9C0D5 1861 aa-0.86□□□□□ -2.55
RNU4-55P-201ENST00000410731 EPG5Q9HCE0 2579 aa-0.87□□□□□ -2.55
RNU4-55P-201ENST00000410731 RYR3Q15413 4870 aa-0.87□□□□□ -2.55
RNU4-55P-201ENST00000410731 NBPF19A0A087WUL8 3843 aa-0.87□□□□□ -2.55
RNU4-55P-201ENST00000410731 A0A096LPI6 279 aa-0.87□□□□□ -2.55
RNU4-55P-201ENST00000410731 HAND1O96004 215 aa-0.87□□□□□ -2.55
RNU4-55P-201ENST00000410731 DYNLT3P51808 116 aa-0.87□□□□□ -2.55
RNU4-55P-201ENST00000410731 MYL6P60660 151 aa-0.87□□□□□ -2.55
RNU4-55P-201ENST00000410731 LRRC18Q8N456 261 aa-0.87□□□□□ -2.55
RNU4-55P-201ENST00000410731 GVINP1Q7Z2Y8 2422 aa-0.87□□□□□ -2.55
RNU4-55P-201ENST00000410731 LAMC3Q9Y6N6 1575 aa-0.87□□□□□ -2.55
RNU4-55P-201ENST00000410731 MYO5AQ9Y4I1 1855 aaKnown RBP-0.88□□□□□ -2.55
RNU4-55P-201ENST00000410731 C9orf170A2RU37 121 aa-0.88□□□□□ -2.55
RNU4-55P-201ENST00000410731 TMEM256-PLSCR3K7ERE1 68 aa-0.88□□□□□ -2.55
RNU4-55P-201ENST00000410731 ERP29P30040 261 aaKnown RBP-0.88□□□□□ -2.55
RNU4-55P-201ENST00000410731 MIR22HGQ0VDD5 57 aa-0.88□□□□□ -2.55
RNU4-55P-201ENST00000410731 TRAPPC5Q8IUR0 188 aa-0.88□□□□□ -2.55
RNU4-55P-201ENST00000410731 OTUD6BQ8N6M0 293 aa-0.88□□□□□ -2.55
RNU4-55P-201ENST00000410731 OR4K15Q8NH41 348 aa-0.88□□□□□ -2.55
RNU4-55P-201ENST00000410731 NAT14Q8WUY8 206 aa-0.88□□□□□ -2.55
RNU4-55P-201ENST00000410731 ATRQ13535 2644 aa-0.88□□□□□ -2.55
RNU4-55P-201ENST00000410731 RYR1P21817 5038 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 DNAH6Q9C0G6 4158 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 EPPK1P58107 5090 aaKnown RBP-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 hDV103S1A0JD37 113 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 SULT1C4O75897 302 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 ATP5G3P48201 142 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 ZNF56Q15929 161 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 XAF1Q6GPH4 301 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 FOXI2Q6ZQN5 318 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 GNPDA2Q8TDQ7 276 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 PLCE1Q9P212 2302 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 KIF1BO60333 1816 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 NUP98P52948 1817 aa-0.89□□□□□ -2.55
RNU4-55P-201ENST00000410731 HIVEP1P15822 2718 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 CETN3O15182 167 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 CST8O60676 142 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 IGHV3-30P01768 117 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 IGHV3-30-5P0DP03 117 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 DEFB109BQ30KR1 87 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 TMEM97Q5BJF2 176 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 PPTC7Q8NI37 304 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 ZHX1-C8orf76Q96EF9 292 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 MALSU1Q96EH3 234 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 LINC00208Q96KT6 92 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 CCDC42Q96M95 316 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 POPDC3Q9HBV1 291 aa-0.9□□□□□ -2.55
RNU4-55P-201ENST00000410731 USP9YO00507 2555 aaPredicted RBP-0.91□□□□□ -2.55
RNU4-55P-201ENST00000410731 SMIM23A6NLE4 172 aa-0.91□□□□□ -2.56
RNU4-55P-201ENST00000410731 EVI2AP22794 236 aa-0.91□□□□□ -2.56
RNU4-55P-201ENST00000410731 COTL1Q14019 142 aa-0.91□□□□□ -2.56
RNU4-55P-201ENST00000410731 PRR15LQ9BU68 103 aa-0.91□□□□□ -2.56
RNU4-55P-201ENST00000410731 SOGA1O94964 1423 aa-0.91□□□□□ -2.56
RNU4-55P-201ENST00000410731 URB1O60287 2271 aaKnown RBP-0.91□□□□□ -2.56
RNU4-55P-201ENST00000410731 A0A096LNT2 108 aa-0.92□□□□□ -2.56
RNU4-55P-201ENST00000410731 A0A1W2PRS3 328 aa-0.92□□□□□ -2.56
RNU4-55P-201ENST00000410731 IFNA7P01567 189 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms