RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 ARL3P36405 182 aa10.1□□□□□ -0.79
HERC3-203ENST00000407637 LINC01549A6NIU2 74 aa10.09□□□□□ -0.79
HERC3-203ENST00000407637 TNFRSF1AP19438 455 aa10.09□□□□□ -0.79
HERC3-203ENST00000407637 PRTN3P24158 256 aa10.09□□□□□ -0.79
HERC3-203ENST00000407637 PEAR1Q5VY43 1037 aaPredicted RBP10.09□□□□□ -0.79
HERC3-203ENST00000407637 MAP1LC3AQ9H492 121 aa10.09□□□□□ -0.79
HERC3-203ENST00000407637 RHODO00212 210 aa10.09□□□□□ -0.79
HERC3-203ENST00000407637 THBDP07204 575 aa10.09□□□□□ -0.79
HERC3-203ENST00000407637 ID1P41134 155 aa10.09□□□□□ -0.79
HERC3-203ENST00000407637 HES7Q9BYE0 225 aa10.09□□□□□ -0.79
HERC3-203ENST00000407637 TMEM133Q9H2Q1 129 aa10.09□□□□□ -0.79
HERC3-203ENST00000407637 ZNF71Q9NQZ8 489 aaPredicted RBP10.09□□□□□ -0.79
HERC3-203ENST00000407637 CACNA1EQ15878 2313 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 TMEM75Q8N9X5 138 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 RPEQ96AT9 228 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 RAX2Q96IS3 184 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 FBXL15Q9H469 300 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 PRRC2CQ9Y520 2896 aaKnown RBP10.08□□□□□ -0.8
HERC3-203ENST00000407637 A0A087WX48 190 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 EPOPA6NHQ4 379 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 H3BVH4 76 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 TGFAP01135 160 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 CGB3P0DN86 165 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 CGB7P0DN87 165 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 ANKRD29Q8N6D5 301 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 PPP1R35Q8TAP8 253 aa10.08□□□□□ -0.8
HERC3-203ENST00000407637 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 NCBP2LA6PVI3 153 aaKnown RBP10.07□□□□□ -0.8
HERC3-203ENST00000407637 ATP5LO75964 103 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 LYZP61626 148 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 GAGE2BQ13066 116 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 GAGE2EQ4V326 116 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 DUX4L9Q6RFH8 374 aaPredicted RBP10.07□□□□□ -0.8
HERC3-203ENST00000407637 C17orf77Q96MU5 243 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 VCX2Q9H322 139 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 GAGE2DQ9UEU5 116 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 AHCTF1Q8WYP5 2266 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 TRAV4A0A0B4J268 109 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 TRBV6-1A0A0K0K1D8 114 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 NDUFA3O95167 84 aa10.07□□□□□ -0.8
HERC3-203ENST00000407637 MRPL20Q9BYC9 149 aaKnown RBP10.07□□□□□ -0.8
HERC3-203ENST00000407637 FOLR3P41439 243 aa10.06□□□□□ -0.8
HERC3-203ENST00000407637 SUB1P53999 127 aaKnown RBP eCLIP10.06□□□□□ -0.8
HERC3-203ENST00000407637 HCP5Q6MZN7 132 aa10.06□□□□□ -0.8
HERC3-203ENST00000407637 HIGD1AQ9Y241 93 aa10.06□□□□□ -0.8
HERC3-203ENST00000407637 DSPP15924 2871 aaKnown RBP10.06□□□□□ -0.8
HERC3-203ENST00000407637 SRRM5B3KS81 715 aa10.06□□□□□ -0.8
HERC3-203ENST00000407637 CRLF1O75462 422 aa10.06□□□□□ -0.8
HERC3-203ENST00000407637 LYZL6O75951 148 aa10.06□□□□□ -0.8
HERC3-203ENST00000407637 FAM159AQ6UWV7 190 aa10.06□□□□□ -0.8
HERC3-203ENST00000407637 TRGV9Q99603 122 aa10.06□□□□□ -0.8
HERC3-203ENST00000407637 RAI1Q7Z5J4 1906 aaPredicted RBP10.06□□□□□ -0.8
HERC3-203ENST00000407637 A8MWV9 139 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 SH2D1AO60880 128 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 TCL1BO95988 128 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 SLC25A39Q9BZJ4 359 aaPredicted RBP10.05□□□□□ -0.8
HERC3-203ENST00000407637 YAE1D1Q9NRH1 226 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 MYMXA0A1B0GTQ4 84 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 TMEM262E9PQX1 116 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 INS-IGF2F8WCM5 200 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 SCGB2A1O75556 95 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 SNCGO76070 127 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 APELAP0DMC3 54 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 GATA1P15976 413 aaPredicted RBP10.05□□□□□ -0.8
HERC3-203ENST00000407637 UBE2D3P61077 147 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 UBE2D2P62837 147 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 TTC32Q5I0X7 151 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 FAM201AQ5SY85 155 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 MSRB1Q9NZV6 116 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 PROCRQ9UNN8 238 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 ZFHX4Q86UP3 3567 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 ICE1Q9Y2F5 2266 aa10.05□□□□□ -0.8
HERC3-203ENST00000407637 A0A1W2PPI3 338 aa10.04□□□□□ -0.8
HERC3-203ENST00000407637 LINC01546A6NGU7 62 aa10.04□□□□□ -0.8
HERC3-203ENST00000407637 M0R3E3 92 aa10.04□□□□□ -0.8
HERC3-203ENST00000407637 IFITM1P13164 125 aa10.04□□□□□ -0.8
HERC3-203ENST00000407637 C1orf210Q8IVY1 113 aa10.04□□□□□ -0.8
HERC3-203ENST00000407637 RNF185Q96GF1 192 aa10.04□□□□□ -0.8
HERC3-203ENST00000407637 RPUSD1Q9UJJ7 312 aaKnown RBP10.04□□□□□ -0.8
HERC3-203ENST00000407637 CENPVL3A0A0U1RRI6 287 aa10.04□□□□□ -0.8
HERC3-203ENST00000407637 TNFRSF6BO95407 300 aa10.04□□□□□ -0.8
HERC3-203ENST00000407637 SPRNQ5BIV9 151 aa10.04□□□□□ -0.8
HERC3-203ENST00000407637 LY6G6EA0A0G2JKS1 128 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 LINC01619G3V211 115 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 CCL4P13236 92 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 SPRY4Q9C004 299 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 NXT2Q9NPJ8 142 aaKnown RBP10.03□□□□□ -0.8
HERC3-203ENST00000407637 VPREB3Q9UKI3 123 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 U3KQA8 63 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 LGALS1P09382 135 aaKnown RBP10.03□□□□□ -0.8
HERC3-203ENST00000407637 TPSG1Q9NRR2 321 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 CADP27708 2225 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 TRAV8-2A0A0B4J237 113 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 IGHV1-2P23083 117 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 PPP1R27Q86WC6 154 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 TMEM167AQ8TBQ9 72 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 PPDPFQ9H3Y8 114 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 TMEM14CQ9P0S9 112 aa10.03□□□□□ -0.8
HERC3-203ENST00000407637 TRBV19A0A075B6N1 114 aa10.02□□□□□ -0.81
HERC3-203ENST00000407637 SIGLEC15Q6ZMC9 328 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms