RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 FOLR2P14207 255 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 CSN1S1P47710 185 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 CNN1P51911 297 aaKnown RBP2.82□□□□□ -1.96
RTN4-208ENST00000404909 UBE2G1P62253 170 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 CENPWQ5EE01 88 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 TMEM88Q6PEY1 159 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 OR9G4Q8NGQ1 327 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 C2CD4CQ8TF44 421 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 HIST1H2BAQ96A08 127 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 ASCL2Q99929 193 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 NAT8Q9UHE5 227 aa2.82□□□□□ -1.96
RTN4-208ENST00000404909 LGALS9O00182 355 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 MGST1P10620 155 aaKnown RBP2.81□□□□□ -1.96
RTN4-208ENST00000404909 BMI1P35226 326 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 GNG4P50150 75 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 FOXL1Q12952 345 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 BTN1A1Q13410 526 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 FAM74A3Q4VXF1 159 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 REC114Q7Z4M0 266 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 LYPD1Q8N2G4 141 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 C11orf52Q96A22 123 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 ATG101Q9BSB4 218 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 NRN1Q9NPD7 142 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 ZNF331Q9NQX6 463 aaPredicted RBP2.81□□□□□ -1.96
RTN4-208ENST00000404909 PEMTQ9UBM1 199 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 IGKV2-40A0A087WW87 121 aaPredicted RBP2.81□□□□□ -1.96
RTN4-208ENST00000404909 A0A1B0GUS0 222 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 C7orf77A4D0Y5 90 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 A8MWP6 167 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 DNASE2O00115 360 aaPredicted RBP2.81□□□□□ -1.96
RTN4-208ENST00000404909 IGKV2D-40P01614 121 aaPredicted RBP2.81□□□□□ -1.96
RTN4-208ENST00000404909 LCN12Q6JVE5 192 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 PRNTQ86SH4 94 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 OCC1Q8TAD7 63 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 SDF2L1Q9HCN8 221 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 A0A087X0K7 114 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 K7EQM0 130 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 PF4P02776 101 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 RPL23P62829 140 aaKnown RBP2.81□□□□□ -1.96
RTN4-208ENST00000404909 OR5I1Q13606 314 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 PRR27Q6MZM9 219 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 LINC01551Q86U37 167 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 BAGE2Q86Y30 109 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 CBLN2Q8IUK8 224 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 DYNLRB2Q8TF09 96 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 WFDC12Q8WWY7 111 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 SLC50A1Q9BRV3 221 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 MLXQ9UH92 298 aa2.81□□□□□ -1.96
RTN4-208ENST00000404909 TRAV8-2A0A0B4J237 113 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 DIRC3C9JPN6 131 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 PRAC2D3DTV9 90 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 OVOL1O14753 267 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 ZNF705DP0CH99 300 aaPredicted RBP2.8□□□□□ -1.96
RTN4-208ENST00000404909 ZNF705BP0CI00 300 aaPredicted RBP2.8□□□□□ -1.96
RTN4-208ENST00000404909 MEOX2P50222 304 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 DEFB1P60022 68 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 PNRC1Q12796 327 aaPredicted RBP2.8□□□□□ -1.96
RTN4-208ENST00000404909 FHL3Q13643 280 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 ADAMTSL5Q6ZMM2 481 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 RBPMS2Q6ZRY4 209 aaKnown RBP2.8□□□□□ -1.96
RTN4-208ENST00000404909 ZNF738Q8NE65 137 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 TCEAL7Q9BRU2 100 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 MS4A6AQ9H2W1 248 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 ADARB2-AS1A8MUL3 147 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 K7EN84 100 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 ZNF253O75346 499 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 ERCC8Q13216 396 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 TMEM183BQ1AE95 376 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 RNF212Q495C1 297 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 NDUFA11Q86Y39 141 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 Q8TAT8 98 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 ISOC2Q96AB3 205 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 FMC1Q96HJ9 113 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 C20orf173Q96LM9 149 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 VGLL1Q99990 258 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 URGCP-MRPS24S4R325 110 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 C9JCJ5 164 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 NDUFS6O75380 124 aaKnown RBP2.8□□□□□ -1.96
RTN4-208ENST00000404909 SAP30O75446 220 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 CSN3P07498 182 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 ZNF688P0C7X2 276 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 TAS2R60P59551 318 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 ERVFC1-1P60608 527 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 PAFAH1B2P68402 229 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 FLI1Q01543 452 aaPredicted RBP2.8□□□□□ -1.96
RTN4-208ENST00000404909 RHEBQ15382 184 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 PSG3Q16557 428 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 KRTAP24-1Q3LI83 254 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 IGF2BP2-AS1Q96M15 143 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 PSG8Q9UQ74 426 aa2.8□□□□□ -1.96
RTN4-208ENST00000404909 F6UB75 175 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 MT-ND4LP03901 98 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 ID1P41134 155 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 CD300EQ496F6 205 aaPredicted RBP2.79□□□□□ -1.96
RTN4-208ENST00000404909 PSMG4Q5JS54 123 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 Q86TA4 180 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 PRIMA1Q86XR5 153 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 TMEM61Q8N0U2 210 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 FAM24BQ8N5W8 94 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 DCANP1Q8TF63 244 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms