RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 IFNA1P01562 189 aa9.14□□□□□ -0.95
LINC00339-201ENST00000404210 TAGLN2P37802 199 aaKnown RBP9.14□□□□□ -0.95
LINC00339-201ENST00000404210 CSN1S1P47710 185 aa9.14□□□□□ -0.95
LINC00339-201ENST00000404210 CLLU1Q5K131 121 aa9.14□□□□□ -0.95
LINC00339-201ENST00000404210 FOXI2Q6ZQN5 318 aa9.14□□□□□ -0.95
LINC00339-201ENST00000404210 CCDC28AQ8IWP9 274 aa9.14□□□□□ -0.95
LINC00339-201ENST00000404210 ZNF738Q8NE65 137 aa9.14□□□□□ -0.95
LINC00339-201ENST00000404210 PCNPQ8WW12 178 aaKnown RBP9.14□□□□□ -0.95
LINC00339-201ENST00000404210 RPUSD4Q96CM3 377 aaKnown RBP9.14□□□□□ -0.95
LINC00339-201ENST00000404210 CITED4Q96RK1 184 aa9.14□□□□□ -0.95
LINC00339-201ENST00000404210 GNG13Q9P2W3 67 aa9.14□□□□□ -0.95
LINC00339-201ENST00000404210 YTHDF2Q9Y5A9 579 aaKnown RBP9.14□□□□□ -0.95
LINC00339-201ENST00000404210 M0R3E3 92 aa9.13□□□□□ -0.95
LINC00339-201ENST00000404210 SLC25A5P05141 298 aaKnown RBP9.13□□□□□ -0.95
LINC00339-201ENST00000404210 CST9LP1Q5W188 147 aa9.13□□□□□ -0.95
LINC00339-201ENST00000404210 EBLN2Q6P2I7 272 aa9.13□□□□□ -0.95
LINC00339-201ENST00000404210 APRG1Q8IVJ8 170 aa9.13□□□□□ -0.95
LINC00339-201ENST00000404210 C5orf17Q8NAS9 161 aa9.13□□□□□ -0.95
LINC00339-201ENST00000404210 CMTM2Q8TAZ6 248 aa9.13□□□□□ -0.95
LINC00339-201ENST00000404210 SAV1Q9H4B6 383 aaPredicted RBP9.13□□□□□ -0.95
LINC00339-201ENST00000404210 EPDR1Q9UM22 224 aa9.13□□□□□ -0.95
LINC00339-201ENST00000404210 A0A0J9YX75 114 aa9.12□□□□□ -0.95
LINC00339-201ENST00000404210 RBFOX3A6NFN3 312 aa9.12□□□□□ -0.95
LINC00339-201ENST00000404210 GGTLC3B5MD39 225 aa9.12□□□□□ -0.95
LINC00339-201ENST00000404210 DIRC3C9JPN6 131 aa9.12□□□□□ -0.95
LINC00339-201ENST00000404210 PRAC2D3DTV9 90 aa9.12□□□□□ -0.95
LINC00339-201ENST00000404210 DUSP14O95147 198 aaKnown RBP9.12□□□□□ -0.95
LINC00339-201ENST00000404210 ZNF124Q15973 351 aa9.12□□□□□ -0.95
LINC00339-201ENST00000404210 DEFB125Q8N687 156 aa9.12□□□□□ -0.95
LINC00339-201ENST00000404210 OR8A1Q8NGG7 326 aa9.12□□□□□ -0.95
LINC00339-201ENST00000404210 TCEAL7Q9BRU2 100 aa9.12□□□□□ -0.95
LINC00339-201ENST00000404210 VAX2Q9UIW0 290 aa9.12□□□□□ -0.95
LINC00339-201ENST00000404210 SERTM2A0A1B0GWG4 89 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 RBAKDNA6NC62 111 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 KNCNA6PVL3 124 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 A8MZ25 164 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 C11orf94C9JXX5 98 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 F6UZH7 168 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 H3BMM0 161 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 NDUFS6O75380 124 aaKnown RBP9.11□□□□□ -0.95
LINC00339-201ENST00000404210 BCL2P10415 239 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 HLA-DRB4P13762 266 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 ATP5G3P48201 142 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 HAGHQ16775 308 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 STHQ8IWL8 128 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 OR10J6PQ8NGY7 276 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 HIST1H2BAQ96A08 127 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 LINC00477Q96M19 166 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 FAM210AQ96ND0 272 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 CLUHP3Q96NS8 147 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 AURKAIP1Q9NWT8 199 aaPredicted RBP9.11□□□□□ -0.95
LINC00339-201ENST00000404210 HLA-DRB4X5D2U9 266 aa9.11□□□□□ -0.95
LINC00339-201ENST00000404210 LOC102723971A0A1B0GUV8 181 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 F6UB75 175 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 LCE2BO14633 110 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 TCRAP04437 139 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 DEFB1P60022 68 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 MEF2BQ02080 365 aaPredicted RBP9.1□□□□□ -0.95
LINC00339-201ENST00000404210 ZNF506Q5JVG8 444 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 ACTL10Q5JWF8 245 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 GDF5OSQ5U4N7 250 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 C9orf47Q6ZRZ4 202 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 RARRES2Q99969 163 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 WFDC10AQ9H1F0 79 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 SRD5A3Q9H8P0 318 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 PPP1R14DQ9NXH3 145 aa9.1□□□□□ -0.95
LINC00339-201ENST00000404210 PKD1L1Q8TDX9 2849 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 AGRNO00468 2067 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 FBLL1A6NHQ2 334 aaKnown RBP9.09□□□□□ -0.95
LINC00339-201ENST00000404210 A8MTW9 85 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 K7EQM0 130 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 IGHV4-30-4P0DP06 118 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 GNG5P63218 68 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 TRPT1Q86TN4 253 aaKnown RBP9.09□□□□□ -0.95
LINC00339-201ENST00000404210 ATG101Q9BSB4 218 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 EIF5A2Q9GZV4 153 aaKnown RBP9.09□□□□□ -0.95
LINC00339-201ENST00000404210 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 SMDT1Q9H4I9 107 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 TUBA4BQ9H853 241 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 DNHD1Q96M86 4753 aa9.09□□□□□ -0.95
LINC00339-201ENST00000404210 NPIPB6E9PJ23 425 aa9.08□□□□□ -0.96
LINC00339-201ENST00000404210 K7EIL1 84 aa9.08□□□□□ -0.96
LINC00339-201ENST00000404210 PEX7O00628 323 aa9.08□□□□□ -0.96
LINC00339-201ENST00000404210 PDE6DO43924 150 aa9.08□□□□□ -0.96
LINC00339-201ENST00000404210 ZNF705DP0CH99 300 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-201ENST00000404210 ZNF705BP0CI00 300 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-201ENST00000404210 CNN1P51911 297 aaKnown RBP9.08□□□□□ -0.96
LINC00339-201ENST00000404210 HIST1H1AQ02539 215 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-201ENST00000404210 LINC00322Q6ZN03 302 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-201ENST00000404210 GOLT1AQ6ZVE7 132 aa9.08□□□□□ -0.96
LINC00339-201ENST00000404210 CYB561D1Q8N8Q1 229 aa9.08□□□□□ -0.96
LINC00339-201ENST00000404210 OR4B1Q8NGF8 309 aa9.08□□□□□ -0.96
LINC00339-201ENST00000404210 VGLL1Q99990 258 aa9.08□□□□□ -0.96
LINC00339-201ENST00000404210 MED9Q9NWA0 146 aa9.08□□□□□ -0.96
LINC00339-201ENST00000404210 RPH3ALQ9UNE2 315 aa9.08□□□□□ -0.96
LINC00339-201ENST00000404210 IGKV2-40A0A087WW87 121 aaPredicted RBP9.07□□□□□ -0.96
LINC00339-201ENST00000404210 LOC102724200A0A096LPH7 203 aaPredicted RBP9.07□□□□□ -0.96
LINC00339-201ENST00000404210 RAB19A4D1S5 217 aa9.07□□□□□ -0.96
LINC00339-201ENST00000404210 RBMY1BA6NDE4 496 aaKnown RBP9.07□□□□□ -0.96
LINC00339-201ENST00000404210 RBMY1EA6NEQ0 496 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms