RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 PRELID1Q9Y255 219 aa12.54□□□□□ -0.4
CDH23-204ENST00000398792 SAP30O75446 220 aa12.53□□□□□ -0.4
CDH23-204ENST00000398792 CD300EQ496F6 205 aaPredicted RBP12.53□□□□□ -0.4
CDH23-204ENST00000398792 SHISA2Q6UWI4 295 aa12.53□□□□□ -0.4
CDH23-204ENST00000398792 ARL6IP6Q8N6S5 226 aa12.53□□□□□ -0.4
CDH23-204ENST00000398792 MRPL53Q96EL3 112 aaKnown RBP12.53□□□□□ -0.4
CDH23-204ENST00000398792 ZNF727A8MUV8 499 aa12.52□□□□□ -0.4
CDH23-204ENST00000398792 DIRC3C9JPN6 131 aa12.52□□□□□ -0.4
CDH23-204ENST00000398792 K7EQG2 157 aa12.52□□□□□ -0.4
CDH23-204ENST00000398792 TSPAN4O14817 238 aa12.52□□□□□ -0.4
CDH23-204ENST00000398792 RPL35P42766 123 aaKnown RBP12.52□□□□□ -0.4
CDH23-204ENST00000398792 CSN1S1P47710 185 aa12.52□□□□□ -0.4
CDH23-204ENST00000398792 CNN1P51911 297 aaKnown RBP12.52□□□□□ -0.4
CDH23-204ENST00000398792 RBPMS2Q6ZRY4 209 aaKnown RBP12.52□□□□□ -0.4
CDH23-204ENST00000398792 GOLT1AQ6ZVE7 132 aa12.52□□□□□ -0.4
CDH23-204ENST00000398792 C20orf173Q96LM9 149 aa12.52□□□□□ -0.4
CDH23-204ENST00000398792 ZNF705FA8MVS1 300 aaPredicted RBP12.51□□□□□ -0.41
CDH23-204ENST00000398792 DNASE2O00115 360 aaPredicted RBP12.51□□□□□ -0.41
CDH23-204ENST00000398792 TFPI2P48307 235 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 PSG3Q16557 428 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 FAM74A3Q4VXF1 159 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 LCN12Q6JVE5 192 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 WFDC3Q8IUB2 231 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 WNK1Q9H4A3 2382 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 TRBV20OR9-2A0A075B6H5 130 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 TRAV2A0A0B4J234 112 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 TRAV25A0A0B4J276 109 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 PRB4P10163 310 aaPredicted RBP12.51□□□□□ -0.41
CDH23-204ENST00000398792 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 LINC00479Q96M42 142 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 NIPSNAP3BQ9BS92 247 aa12.51□□□□□ -0.41
CDH23-204ENST00000398792 IGKV2-40A0A087WW87 121 aaPredicted RBP12.5□□□□□ -0.41
CDH23-204ENST00000398792 TRAV34A0A0B4J273 112 aa12.5□□□□□ -0.41
CDH23-204ENST00000398792 IGKV2D-40P01614 121 aaPredicted RBP12.5□□□□□ -0.41
CDH23-204ENST00000398792 IGLV1-51P01701 117 aa12.5□□□□□ -0.41
CDH23-204ENST00000398792 APOC3P02656 99 aa12.5□□□□□ -0.41
CDH23-204ENST00000398792 ID1P41134 155 aa12.5□□□□□ -0.41
CDH23-204ENST00000398792 GUCA2BQ16661 112 aa12.5□□□□□ -0.41
CDH23-204ENST00000398792 FAM24BQ8N5W8 94 aa12.5□□□□□ -0.41
CDH23-204ENST00000398792 ZNF738Q8NE65 137 aa12.5□□□□□ -0.41
CDH23-204ENST00000398792 SPATA3Q8NHX4 192 aa12.5□□□□□ -0.41
CDH23-204ENST00000398792 FMC1Q96HJ9 113 aa12.5□□□□□ -0.41
CDH23-204ENST00000398792 SPAG8Q99932 426 aaPredicted RBP12.5□□□□□ -0.41
CDH23-204ENST00000398792 KLF12Q9Y4X4 402 aa12.5□□□□□ -0.41
CDH23-204ENST00000398792 IZUMO1RA6ND01 250 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 C9JCJ5 164 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 PRAC2D3DTV9 90 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 K7EQM0 130 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 UBE2G1P62253 170 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 TMEM183BQ1AE95 376 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 CENPWQ5EE01 88 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 LURAP1LQ8IV03 231 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 TMEM75Q8N9X5 138 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 IGF2BP2-AS1Q96M15 143 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 NAT8Q9UHE5 227 aa12.49□□□□□ -0.41
CDH23-204ENST00000398792 TRAV8-1A0A0A6YYK1 113 aa12.48□□□□□ -0.41
CDH23-204ENST00000398792 IGLV2-11P01706 119 aa12.48□□□□□ -0.41
CDH23-204ENST00000398792 ZNF688P0C7X2 276 aa12.48□□□□□ -0.41
CDH23-204ENST00000398792 TAS2R60P59551 318 aa12.48□□□□□ -0.41
CDH23-204ENST00000398792 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
CDH23-204ENST00000398792 Q86TA4 180 aa12.48□□□□□ -0.41
CDH23-204ENST00000398792 OR2K2Q8NGT1 345 aa12.48□□□□□ -0.41
CDH23-204ENST00000398792 S100A9P06702 114 aaKnown RBP12.48□□□□□ -0.41
CDH23-204ENST00000398792 SGK494Q96LW2 274 aa12.48□□□□□ -0.41
CDH23-204ENST00000398792 RBAKDNA6NC62 111 aa12.47□□□□□ -0.41
CDH23-204ENST00000398792 PGPEP1LA6NFU8 196 aa12.47□□□□□ -0.41
CDH23-204ENST00000398792 OR4C46A6NHA9 309 aa12.47□□□□□ -0.41
CDH23-204ENST00000398792 GNG4P50150 75 aa12.47□□□□□ -0.41
CDH23-204ENST00000398792 TMEM241Q24JQ0 296 aa12.47□□□□□ -0.41
CDH23-204ENST00000398792 PSMG4Q5JS54 123 aa12.47□□□□□ -0.41
CDH23-204ENST00000398792 SVBPQ8N300 66 aa12.47□□□□□ -0.41
CDH23-204ENST00000398792 SDF2L1Q9HCN8 221 aa12.47□□□□□ -0.41
CDH23-204ENST00000398792 TRBV6-1A0A0K0K1D8 114 aa12.46□□□□□ -0.41
CDH23-204ENST00000398792 CD33P20138 364 aa12.46□□□□□ -0.41
CDH23-204ENST00000398792 FLI1Q01543 452 aaPredicted RBP12.46□□□□□ -0.41
CDH23-204ENST00000398792 TVP23CQ96ET8 276 aa12.46□□□□□ -0.41
CDH23-204ENST00000398792 ZNF256Q9Y2P7 627 aaPredicted RBP12.46□□□□□ -0.41
CDH23-204ENST00000398792 FBLL1A6NHQ2 334 aaKnown RBP12.45□□□□□ -0.42
CDH23-204ENST00000398792 LTAP01374 205 aa12.45□□□□□ -0.42
CDH23-204ENST00000398792 INSL3P51460 131 aa12.45□□□□□ -0.42
CDH23-204ENST00000398792 RPL23P62829 140 aaKnown RBP12.45□□□□□ -0.42
CDH23-204ENST00000398792 PNRC1Q12796 327 aaPredicted RBP12.45□□□□□ -0.42
CDH23-204ENST00000398792 C9orf66Q5T8R8 295 aa12.45□□□□□ -0.42
CDH23-204ENST00000398792 LINC01551Q86U37 167 aa12.45□□□□□ -0.42
CDH23-204ENST00000398792 VGLL1Q99990 258 aa12.45□□□□□ -0.42
CDH23-204ENST00000398792 PSG8Q9UQ74 426 aa12.45□□□□□ -0.42
CDH23-204ENST00000398792 LY96Q9Y6Y9 160 aa12.45□□□□□ -0.42
CDH23-204ENST00000398792 DEFB1P60022 68 aa12.44□□□□□ -0.42
CDH23-204ENST00000398792 PRNTQ86SH4 94 aa12.44□□□□□ -0.42
CDH23-204ENST00000398792 WFDC9Q8NEX5 89 aa12.44□□□□□ -0.42
CDH23-204ENST00000398792 MCRIP2Q9BUT9 160 aaKnown RBP12.44□□□□□ -0.42
CDH23-204ENST00000398792 F6UB75 175 aa12.44□□□□□ -0.42
CDH23-204ENST00000398792 IGLV2-8P01709 118 aa12.44□□□□□ -0.42
CDH23-204ENST00000398792 ERCC8Q13216 396 aa12.44□□□□□ -0.42
CDH23-204ENST00000398792 ADIRFQ15847 76 aa12.44□□□□□ -0.42
CDH23-204ENST00000398792 BAGE2Q86Y30 109 aa12.44□□□□□ -0.42
CDH23-204ENST00000398792 NHLRC2Q8NBF2 726 aa12.44□□□□□ -0.42
CDH23-204ENST00000398792 CLRN3Q8NCR9 226 aa12.44□□□□□ -0.42
CDH23-204ENST00000398792 OR8A1Q8NGG7 326 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms