RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ZNF331Q9NQX6 463 aaPredicted RBP14.95□□□□□ -0.02
PDLIM2-204ENST00000397760 TMEM89A2RUT3 159 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 SCGB2A1O75556 95 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 CLEC3BP05452 202 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 HIST1H1EP10412 219 aaKnown RBP14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 GPR183P32249 361 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 CLEC19AQ6UXS0 136 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 C20orf144Q9BQM9 153 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 SAMD10Q9BYL1 202 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 EPDR1Q9UM22 224 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 A0A0G2JLM5 398 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 HYPMO75409 117 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 GPX1P07203 203 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 CTSGP08311 255 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 PSG1P11464 419 aa14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 USF2Q15853 346 aaPredicted RBP14.94□□□□□ -0.02
PDLIM2-204ENST00000397760 ZNF705FA8MVS1 300 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-204ENST00000397760 ZNF705DP0CH99 300 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-204ENST00000397760 ZNF705BP0CI00 300 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-204ENST00000397760 ATP5L2Q7Z4Y8 100 aa14.93□□□□□ -0.02
PDLIM2-204ENST00000397760 MRPL27Q9P0M9 148 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-204ENST00000397760 TCF21O43680 179 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 TOMM40O96008 361 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 ELANEP08246 267 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 FRMD6-AS1P0C7T7 363 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 UBE2G1P62253 170 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 FOXE3Q13461 319 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 KCNS1Q96KK3 526 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 ZNF586Q9NXT0 402 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 BMPR1BO00238 502 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 APCSP02743 223 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 C5orf17Q8NAS9 161 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 TSKUQ8WUA8 353 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 FMC1Q96HJ9 113 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 GPR82Q96P67 336 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 ATP6V0BQ99437 205 aa14.92□□□□□ -0.02
PDLIM2-204ENST00000397760 IGHV3-11P01762 117 aa14.91□□□□□ -0.02
PDLIM2-204ENST00000397760 NBEAP1P0C6P0 100 aa14.91□□□□□ -0.02
PDLIM2-204ENST00000397760 ORM2P19652 201 aa14.91□□□□□ -0.02
PDLIM2-204ENST00000397760 CT83Q5H943 113 aa14.91□□□□□ -0.02
PDLIM2-204ENST00000397760 NUDT10Q8NFP7 164 aa14.91□□□□□ -0.02
PDLIM2-204ENST00000397760 OR1B1Q8NGR6 318 aa14.91□□□□□ -0.02
PDLIM2-204ENST00000397760 NUDT11Q96G61 164 aa14.91□□□□□ -0.02
PDLIM2-204ENST00000397760 ATG101Q9BSB4 218 aa14.91□□□□□ -0.02
PDLIM2-204ENST00000397760 CUBNO60494 3623 aa14.91□□□□□ -0.02
PDLIM2-204ENST00000397760 ZNF253O75346 499 aa14.9□□□□□ -0.02
PDLIM2-204ENST00000397760 RPLP1P05386 114 aaKnown RBP14.9□□□□□ -0.02
PDLIM2-204ENST00000397760 TCL1AP56279 114 aa14.9□□□□□ -0.02
PDLIM2-204ENST00000397760 TOMM20LQ6UXN7 152 aa14.9□□□□□ -0.02
PDLIM2-204ENST00000397760 KLHDC1Q8N7A1 406 aa14.9□□□□□ -0.02
PDLIM2-204ENST00000397760 LINC00479Q96M42 142 aa14.9□□□□□ -0.02
PDLIM2-204ENST00000397760 C16orf95Q9H693 158 aa14.9□□□□□ -0.02
PDLIM2-204ENST00000397760 TMEM14CQ9P0S9 112 aa14.9□□□□□ -0.02
PDLIM2-204ENST00000397760 A0A1B0GV90 55 aa14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 SLC25A5P05141 298 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 GP9P14770 177 aa14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 LYZP61626 148 aa14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 MRPL54Q6P161 138 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 OR4X2Q8NGF9 303 aa14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 MLST8Q9BVC4 326 aa14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 ZNF492Q9P255 531 aa14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 FN1P02751 2386 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 PGPA6NDG6 321 aa14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 F8P00451 2351 aa14.89□□□□□ -0.03
PDLIM2-204ENST00000397760 IGHV3-35A0A0C4DH35 117 aa14.88□□□□□ -0.03
PDLIM2-204ENST00000397760 M0R143 59 aa14.88□□□□□ -0.03
PDLIM2-204ENST00000397760 SPINK4O60575 86 aa14.88□□□□□ -0.03
PDLIM2-204ENST00000397760 IL4P05112 153 aa14.88□□□□□ -0.03
PDLIM2-204ENST00000397760 SRIP30626 198 aa14.88□□□□□ -0.03
PDLIM2-204ENST00000397760 KLF5Q13887 457 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-204ENST00000397760 ZNF491Q8N8L2 437 aa14.88□□□□□ -0.03
PDLIM2-204ENST00000397760 RNF152Q8N8N0 203 aa14.88□□□□□ -0.03
PDLIM2-204ENST00000397760 NUP35Q8NFH5 326 aa14.88□□□□□ -0.03
PDLIM2-204ENST00000397760 RNF24Q9Y225 148 aa14.88□□□□□ -0.03
PDLIM2-204ENST00000397760 WI2-2373I1.2A0A1W2PRP0 233 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 A0A1W2PS18 150 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 F2Z2F3 143 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 ZNF324O75467 553 aaPredicted RBP14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 ARL3P36405 182 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 OR4B1Q8NGF8 309 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 LINC01006Q8NI28 216 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 HIGD1AQ9Y241 93 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 TRAV34A0A0B4J273 112 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 TRBV6-1A0A0K0K1D8 114 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 FAM231BA6NCW3 169 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 NDUFA7O95182 113 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 LTAP01374 205 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 TRBV12-3P01733 135 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 SNRPCP09234 159 aaKnown RBP14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 NHLRC2Q8NBF2 726 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 MYOZ3Q8TDC0 251 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 RNF125Q96EQ8 232 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 MIEN1Q9BRT3 115 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 VAMP8Q9BV40 100 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 GFRA4Q9GZZ7 299 aa14.87□□□□□ -0.03
PDLIM2-204ENST00000397760 NSD1Q96L73 2696 aaPredicted RBP14.86□□□□□ -0.03
PDLIM2-204ENST00000397760 RAB4AP20338 218 aa14.86□□□□□ -0.03
PDLIM2-204ENST00000397760 AMTP48728 403 aa14.86□□□□□ -0.03
PDLIM2-204ENST00000397760 SRSF2Q01130 221 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms