RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TMEM242Q9NWH2 141 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 S100A9P06702 114 aaKnown RBP9.61□□□□□ -0.87
TRIM39-204ENST00000396548 CBLN1P23435 193 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 DLX4Q92988 240 aaPredicted RBP9.61□□□□□ -0.87
TRIM39-204ENST00000396548 GRAMD2BQ96HH9 432 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 RPS10P5Q9NQ39 176 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 CNN1P51911 297 aaKnown RBP9.61□□□□□ -0.87
TRIM39-204ENST00000396548 C11orf44Q8N8P7 122 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 TUBA4BQ9H853 241 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 GNG4P50150 75 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 ADIRFQ15847 76 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 MRPL53Q96EL3 112 aaKnown RBP9.6□□□□□ -0.87
TRIM39-204ENST00000396548 C20orf173Q96LM9 149 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 AAMDCQ9H7C9 122 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 AURKAIP1Q9NWT8 199 aaPredicted RBP9.6□□□□□ -0.87
TRIM39-204ENST00000396548 MLXQ9UH92 298 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 F8P00451 2351 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 HAX1O00165 279 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 GCGP01275 180 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 RNF212Q495C1 297 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 TMEM88Q6PEY1 159 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 GOLT1AQ6ZVE7 132 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 RNF182Q8N6D2 247 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 DCANP1Q8TF63 244 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 SMIM12Q96EX1 92 aa9.6□□□□□ -0.87
TRIM39-204ENST00000396548 ZNF705FA8MVS1 300 aaPredicted RBP9.59□□□□□ -0.87
TRIM39-204ENST00000396548 PSG3Q16557 428 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 CSN3P07498 182 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 LCN12Q6JVE5 192 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 Q86TA4 180 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 OR9G4Q8NGQ1 327 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 CMTM2Q8TAZ6 248 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 NRN1Q9NPD7 142 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 TRAV8-1A0A0A6YYK1 113 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 SERTM2A0A1B0GWG4 89 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 FOLR2P14207 255 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 KHDC1LQ5JSQ8 128 aa9.59□□□□□ -0.87
TRIM39-204ENST00000396548 A0A1B0GUS0 222 aa9.58□□□□□ -0.88
TRIM39-204ENST00000396548 CCL24O00175 119 aa9.58□□□□□ -0.88
TRIM39-204ENST00000396548 TCF24Q7RTU0 167 aa9.58□□□□□ -0.88
TRIM39-204ENST00000396548 SGK494Q96LW2 274 aa9.58□□□□□ -0.88
TRIM39-204ENST00000396548 CTDSP1Q9GZU7 261 aa9.58□□□□□ -0.88
TRIM39-204ENST00000396548 RPH3ALQ9UNE2 315 aa9.58□□□□□ -0.88
TRIM39-204ENST00000396548 RBAKDNA6NC62 111 aa9.58□□□□□ -0.88
TRIM39-204ENST00000396548 PRB4P10163 310 aaPredicted RBP9.58□□□□□ -0.88
TRIM39-204ENST00000396548 COX8CQ7Z4L0 72 aa9.58□□□□□ -0.88
TRIM39-204ENST00000396548 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.58□□□□□ -0.88
TRIM39-204ENST00000396548 SMCO4Q9NRQ5 59 aa9.58□□□□□ -0.88
TRIM39-204ENST00000396548 A0A1W2PRX2 142 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 CXorf65A6NEN9 183 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 OR5I1Q13606 314 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 DPF1Q92782 380 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 SFRP2Q96HF1 295 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 CLEC5AQ9NY25 188 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 BAGE2Q86Y30 109 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 IGKV2-40A0A087WW87 121 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-204ENST00000396548 COLCA2A8K830 154 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 IGKV2D-40P01614 121 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-204ENST00000396548 BMI1P35226 326 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 UBE2G1P62253 170 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 NDUFA11Q86Y39 141 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 ANAPC16Q96DE5 110 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 VGLL1Q99990 258 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 SELENOKQ9Y6D0 94 aa9.57□□□□□ -0.88
TRIM39-204ENST00000396548 CMYA5Q8N3K9 4069 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 TENM1Q9UKZ4 2725 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 AKR1D1P51857 326 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 TMEM183AQ8IXX5 376 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 NHLRC2Q8NBF2 726 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 MS4A6AQ9H2W1 248 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 SAV1Q9H4B6 383 aaPredicted RBP9.56□□□□□ -0.88
TRIM39-204ENST00000396548 PEMTQ9UBM1 199 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 PSG8Q9UQ74 426 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 FLI1Q01543 452 aaPredicted RBP9.56□□□□□ -0.88
TRIM39-204ENST00000396548 LINC00322Q6ZN03 302 aaPredicted RBP9.56□□□□□ -0.88
TRIM39-204ENST00000396548 C16orf92Q96LL3 132 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 PPP1R14DQ9NXH3 145 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 SIGLEC8Q9NYZ4 499 aa9.56□□□□□ -0.88
TRIM39-204ENST00000396548 MT-ND4LP03901 98 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 CSN1S1P47710 185 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 LINC00518Q8N0U6 118 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 ZFP30Q9Y2G7 519 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 V9GYV3 84 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 C19orf71A6NCJ1 209 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 FBLL1A6NHQ2 334 aaKnown RBP9.55□□□□□ -0.88
TRIM39-204ENST00000396548 K7EQG2 157 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 PFN1P07737 140 aaKnown RBP9.55□□□□□ -0.88
TRIM39-204ENST00000396548 ELOBQ15370 118 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 FAM24BQ8N5W8 94 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 OSTCQ9NRP0 149 aa9.55□□□□□ -0.88
TRIM39-204ENST00000396548 K7EQM0 130 aa9.54□□□□□ -0.88
TRIM39-204ENST00000396548 C9orf47Q6ZRZ4 202 aa9.54□□□□□ -0.88
TRIM39-204ENST00000396548 PRNTQ86SH4 94 aa9.54□□□□□ -0.88
TRIM39-204ENST00000396548 CITED1Q99966 193 aa9.54□□□□□ -0.88
TRIM39-204ENST00000396548 C15orf54Q8N8G6 183 aa9.54□□□□□ -0.88
TRIM39-204ENST00000396548 ASCL2Q99929 193 aa9.54□□□□□ -0.88
TRIM39-204ENST00000396548 RNASE7Q9H1E1 156 aaKnown RBP9.54□□□□□ -0.88
TRIM39-204ENST00000396548 ZNF492Q9P255 531 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms