RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 MED12Q93074 2177 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 NBASA2RRP1 2371 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 ORM1P02763 201 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 CD3EP07766 207 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 PLNP26678 52 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 ZNF714Q96N38 554 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 IGKV1OR2-108A0A075B7D4 117 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 IGHV3OR15-7A0A075B7D8 119 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 ZNF815PA8K554 130 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 H3BTX0 84 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 TIMM23O14925 209 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 LGALS1P09382 135 aaKnown RBP6.77□□□□□ -1.33
DHFR2-202ENST00000394221 SSR4P51571 173 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 TNFAIP6P98066 277 aaPredicted RBP6.77□□□□□ -1.33
DHFR2-202ENST00000394221 Q1RN00 199 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 BAALCQ8WXS3 180 aa6.77□□□□□ -1.33
DHFR2-202ENST00000394221 MRPL20Q9BYC9 149 aaKnown RBP6.77□□□□□ -1.33
DHFR2-202ENST00000394221 M0R2P5 195 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 RPL13AP40429 203 aaKnown RBP6.76□□□□□ -1.33
DHFR2-202ENST00000394221 TMEM196Q5HYL7 178 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 LINC00305Q7Z4B0 112 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 TRPT1Q86TN4 253 aaKnown RBP6.76□□□□□ -1.33
DHFR2-202ENST00000394221 LINC00526Q96FQ7 95 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 NXT2Q9NPJ8 142 aaKnown RBP6.76□□□□□ -1.33
DHFR2-202ENST00000394221 CHCHD2Q9Y6H1 151 aaPredicted RBP6.76□□□□□ -1.33
DHFR2-202ENST00000394221 TRGV11A0A075B6L2 103 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 CDX4O14627 284 aaPredicted RBP6.76□□□□□ -1.33
DHFR2-202ENST00000394221 HERVK_113P61574 105 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 MDP1Q86V88 176 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 SLC22A18ASQ8N1D0 253 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 ASCL2Q99929 193 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 GOLT1AQ6ZVE7 132 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 Q9H3A6 140 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 U3KQK5 164 aa6.76□□□□□ -1.33
DHFR2-202ENST00000394221 SEC16AO15027 2179 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 C15orf65H3BRN8 121 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 UBE2D1P51668 147 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 ZNRF2Q8NHG8 242 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 RPP25Q9BUL9 199 aaKnown RBP6.75□□□□□ -1.33
DHFR2-202ENST00000394221 H7C2G1 150 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 TRACP01848 142 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 NDUFA11Q86Y39 141 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 RP1P56715 2156 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 TEX49A0A1B0GTD5 131 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 TM4SF5O14894 197 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 CD69Q07108 199 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 ATXN8Q156A1 80 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 MLANAQ16655 118 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 LYZL1Q6UWQ5 148 aa6.75□□□□□ -1.33
DHFR2-202ENST00000394221 FOXA2Q9Y261 457 aaPredicted RBP6.75□□□□□ -1.33
DHFR2-202ENST00000394221 IGHV3-64DA0A0J9YX35 117 aa6.74□□□□□ -1.33
DHFR2-202ENST00000394221 IGFBPL1Q8WX77 278 aa6.74□□□□□ -1.33
DHFR2-202ENST00000394221 MBD3L4A6NDZ8 208 aaPredicted RBP6.74□□□□□ -1.33
DHFR2-202ENST00000394221 MBD3L3A6NE82 208 aaPredicted RBP6.74□□□□□ -1.33
DHFR2-202ENST00000394221 MBD3L5A6NJ08 208 aaPredicted RBP6.74□□□□□ -1.33
DHFR2-202ENST00000394221 J3QLI3 93 aa6.74□□□□□ -1.33
DHFR2-202ENST00000394221 LGALS9O00182 355 aa6.74□□□□□ -1.33
DHFR2-202ENST00000394221 HLA-DMBP28068 263 aa6.74□□□□□ -1.33
DHFR2-202ENST00000394221 VKORC1Q9BQB6 163 aa6.74□□□□□ -1.33
DHFR2-202ENST00000394221 PROK2Q9HC23 129 aa6.74□□□□□ -1.33
DHFR2-202ENST00000394221 IGHV4-39P01824 125 aa6.74□□□□□ -1.33
DHFR2-202ENST00000394221 MYCNOSP40205 109 aa6.74□□□□□ -1.33
DHFR2-202ENST00000394221 LILRA6Q6PI73 481 aa6.74□□□□□ -1.33
DHFR2-202ENST00000394221 ARHGEF17Q96PE2 2063 aaPredicted RBP6.74□□□□□ -1.33
DHFR2-202ENST00000394221 TRBV7-7A0A0K0K1E9 115 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 C4orf26Q17RF5 130 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 PRO1854Q9UHT4 67 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 LINC00527Q9UJ94 153 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 IGHG3P01860 377 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 DLX6P56179 175 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 RPL39P5Q59GN2 51 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 UTF1Q5T230 341 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 C2orf82Q6UX34 121 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 MRPS12O15235 138 aaKnown RBP6.73□□□□□ -1.33
DHFR2-202ENST00000394221 IGHV3-9P01782 118 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 SEC61GP60059 68 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 EDDM3AQ14507 147 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 C3orf36Q3SXR2 165 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 IGLV3-32A0A0A0MS00 114 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 ERHP84090 104 aaKnown RBP6.73□□□□□ -1.33
DHFR2-202ENST00000394221 PAX8Q06710 450 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 LINC01620Q4KN68 170 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 C2orf83Q53S99 150 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 OTORQ9NRC9 128 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 TMEM14BQ9NUH8 114 aa6.73□□□□□ -1.33
DHFR2-202ENST00000394221 SPTAN1Q13813 2472 aaKnown RBP6.72□□□□□ -1.33
DHFR2-202ENST00000394221 A0A096LPE4 126 aa6.72□□□□□ -1.33
DHFR2-202ENST00000394221 A0A1W2PPZ6 126 aa6.72□□□□□ -1.33
DHFR2-202ENST00000394221 H7C1H1 209 aa6.72□□□□□ -1.33
DHFR2-202ENST00000394221 ATP5G1P05496 136 aa6.72□□□□□ -1.33
DHFR2-202ENST00000394221 PLXDC1Q8IUK5 500 aa6.72□□□□□ -1.33
DHFR2-202ENST00000394221 ABCA7Q8IZY2 2146 aa6.72□□□□□ -1.33
DHFR2-202ENST00000394221 IGHV5-51A0A0C4DH38 117 aa6.72□□□□□ -1.33
DHFR2-202ENST00000394221 IGHV3-13P01766 116 aa6.72□□□□□ -1.33
DHFR2-202ENST00000394221 GRPP07492 148 aa6.72□□□□□ -1.33
DHFR2-202ENST00000394221 CRIP2P52943 208 aaPredicted RBP6.72□□□□□ -1.33
DHFR2-202ENST00000394221 SUB1P53999 127 aaKnown RBP eCLIP6.72□□□□□ -1.33
DHFR2-202ENST00000394221 GFERP55789 205 aa6.72□□□□□ -1.33
DHFR2-202ENST00000394221 PRCDQ00LT1 54 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms