RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 RAB5AP20339 215 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 EDN2P20800 178 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 HOXD3P31249 432 aaPredicted RBP6.59□□□□□ -1.35
TDP1-203ENST00000393454 CDX1P47902 265 aaPredicted RBP6.59□□□□□ -1.35
TDP1-203ENST00000393454 MEOX2P50222 304 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 FLI1Q01543 452 aaPredicted RBP6.59□□□□□ -1.35
TDP1-203ENST00000393454 PSG3Q16557 428 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 TCTEX1D4Q5JR98 221 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 IBA57Q5T440 356 aaKnown RBP6.59□□□□□ -1.35
TDP1-203ENST00000393454 LCN12Q6JVE5 192 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 KCNIP4Q6PIL6 250 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 C8orf86Q6ZUL3 223 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 Q86TA4 180 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 TMEM75Q8N9X5 138 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 KLHL30-AS1Q8NEE0 82 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 YPEL4Q96NS1 127 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 ASCL2Q99929 193 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 PSG8Q9UQ74 426 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 A0A1W2PPQ1 181 aa6.58□□□□□ -1.36
TDP1-203ENST00000393454 LTAP01374 205 aa6.58□□□□□ -1.36
TDP1-203ENST00000393454 IGLV2-11P01706 119 aa6.58□□□□□ -1.36
TDP1-203ENST00000393454 HIVEP1P15822 2718 aa6.58□□□□□ -1.36
TDP1-203ENST00000393454 BMI1P35226 326 aa6.58□□□□□ -1.36
TDP1-203ENST00000393454 RPS10P46783 165 aaKnown RBP6.58□□□□□ -1.36
TDP1-203ENST00000393454 FAM3BP58499 235 aaPredicted RBP6.58□□□□□ -1.36
TDP1-203ENST00000393454 OR11H1Q8NG94 326 aa6.58□□□□□ -1.36
TDP1-203ENST00000393454 LINC01006Q8NI28 216 aa6.58□□□□□ -1.36
TDP1-203ENST00000393454 C4orf3Q8WVX3 66 aa6.58□□□□□ -1.36
TDP1-203ENST00000393454 C16orf95Q9H693 158 aa6.58□□□□□ -1.36
TDP1-203ENST00000393454 OSTCQ9NRP0 149 aa6.58□□□□□ -1.36
TDP1-203ENST00000393454 SERTM2A0A1B0GWG4 89 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 A0A1W2PRX2 142 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 ZNF705GA8MUZ8 300 aaPredicted RBP6.57□□□□□ -1.36
TDP1-203ENST00000393454 LINC01619G3V211 115 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 PFN1P07737 140 aaKnown RBP6.57□□□□□ -1.36
TDP1-203ENST00000393454 SLURP1P55000 103 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 TCF24Q7RTU0 167 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 OR1N2Q8NGR9 330 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 SMIM12Q96EX1 92 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 FAM210BQ96KR6 192 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 DUX3Q96PT4 197 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 BIN3Q9NQY0 253 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 MLXQ9UH92 298 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 SETD2Q9BYW2 2564 aaPredicted RBP6.57□□□□□ -1.36
TDP1-203ENST00000393454 TRAV8-2A0A0B4J237 113 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 TMEM213A2RRL7 107 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 TCF21O43680 179 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 GATCO43716 136 aaKnown RBP6.57□□□□□ -1.36
TDP1-203ENST00000393454 CD28P10747 220 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 REC114Q7Z4M0 266 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 C1QL4Q86Z23 238 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 TMEM183AQ8IXX5 376 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 DAZAP1Q96EP5 407 aaKnown RBP6.57□□□□□ -1.36
TDP1-203ENST00000393454 ZFP30Q9Y2G7 519 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 V9GYV3 84 aa6.57□□□□□ -1.36
TDP1-203ENST00000393454 TRBV6-1A0A0K0K1D8 114 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 PRAC2D3DTV9 90 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 LGALS9O00182 355 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 SRSF2Q01130 221 aaKnown RBP6.56□□□□□ -1.36
TDP1-203ENST00000393454 WFDC3Q8IUB2 231 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 GBGT1Q8N5D6 347 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 ARL6IP6Q8N6S5 226 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 NUDT10Q8NFP7 164 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 NUDT11Q96G61 164 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 IMMP2LQ96T52 175 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 VGLL1Q99990 258 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 MLST8Q9BVC4 326 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 NRN1Q9NPD7 142 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 IL36BQ9NZH7 164 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 RNF114Q9Y508 228 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 CUBNO60494 3623 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 TRBV24-1A0A075B6N3 115 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 CYSRT1A8MQ03 144 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 A8MWP6 167 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 C1orf196B1AJZ1 125 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 M0QZ24 198 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 FOXL1Q12952 345 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 ERCC8Q13216 396 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 KLF5Q13887 457 aaPredicted RBP6.56□□□□□ -1.36
TDP1-203ENST00000393454 ZFP82Q8N141 532 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 ZNF738Q8NE65 137 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 CLEC5AQ9NY25 188 aa6.56□□□□□ -1.36
TDP1-203ENST00000393454 NSD1Q96L73 2696 aaPredicted RBP6.55□□□□□ -1.36
TDP1-203ENST00000393454 C2orf70A6NJV1 201 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 NDUFA7O95182 113 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 CA1P00915 261 aaPredicted RBP6.55□□□□□ -1.36
TDP1-203ENST00000393454 P01737 135 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 FOLR2P14207 255 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 CBLN1P23435 193 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 TFPI2P48307 235 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 TCL1AP56279 114 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 FAM231DQ6ZW35 169 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 Q8TAT8 98 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 WIPF2Q8TF74 440 aaPredicted RBP6.55□□□□□ -1.36
TDP1-203ENST00000393454 ZC2HC1AQ96GY0 325 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 C8orf49Q96NF6 230 aa6.55□□□□□ -1.36
TDP1-203ENST00000393454 CITED2Q99967 270 aaPredicted RBP6.55□□□□□ -1.36
TDP1-203ENST00000393454 FBLL1A6NHQ2 334 aaKnown RBP6.54□□□□□ -1.36
TDP1-203ENST00000393454 CRLF1O75462 422 aa6.54□□□□□ -1.36
TDP1-203ENST00000393454 CT45A10P0DMU9 189 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms