RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 TMED4Q7Z7H5 227 aa0.42□□□□□ -2.34
SNORA40.2-201ENST00000390847 NEK7Q8TDX7 302 aa0.42□□□□□ -2.34
SNORA40.2-201ENST00000390847 LIMD2Q9BT23 127 aa0.42□□□□□ -2.34
SNORA40.2-201ENST00000390847 CST11Q9H112 138 aa0.42□□□□□ -2.34
SNORA40.2-201ENST00000390847 JPT1Q9UK76 154 aa0.42□□□□□ -2.34
SNORA40.2-201ENST00000390847 PTPRFP10586 1907 aa0.42□□□□□ -2.34
SNORA40.2-201ENST00000390847 NCAPD3P42695 1498 aa0.41□□□□□ -2.34
SNORA40.2-201ENST00000390847 IGHV3-33P01772 117 aa0.41□□□□□ -2.34
SNORA40.2-201ENST00000390847 RPL35P42766 123 aaKnown RBP0.41□□□□□ -2.34
SNORA40.2-201ENST00000390847 RTL8BQ17RB0 113 aa0.41□□□□□ -2.34
SNORA40.2-201ENST00000390847 FKBP1CQ5VVH2 108 aa0.41□□□□□ -2.34
SNORA40.2-201ENST00000390847 NUP35Q8NFH5 326 aa0.41□□□□□ -2.34
SNORA40.2-201ENST00000390847 RTL8AQ9BWD3 113 aa0.41□□□□□ -2.34
SNORA40.2-201ENST00000390847 OR2H1Q9GZK4 316 aa0.41□□□□□ -2.34
SNORA40.2-201ENST00000390847 COL24A1Q17RW2 1714 aa0.41□□□□□ -2.34
SNORA40.2-201ENST00000390847 CAMSAP2Q08AD1 1489 aa0.41□□□□□ -2.34
SNORA40.2-201ENST00000390847 MFSD11O43934 449 aa0.4□□□□□ -2.35
SNORA40.2-201ENST00000390847 PIAS1O75925 651 aa0.4□□□□□ -2.35
SNORA40.2-201ENST00000390847 GNG3P63215 75 aa0.4□□□□□ -2.35
SNORA40.2-201ENST00000390847 PHF5AQ7RTV0 110 aaKnown RBP0.4□□□□□ -2.35
SNORA40.2-201ENST00000390847 SMIM20Q8N5G0 67 aa0.4□□□□□ -2.35
SNORA40.2-201ENST00000390847 AP3S1Q92572 193 aa0.4□□□□□ -2.35
SNORA40.2-201ENST00000390847 CCL19Q99731 98 aa0.4□□□□□ -2.35
SNORA40.2-201ENST00000390847 TPRKBQ9Y3C4 175 aa0.4□□□□□ -2.35
SNORA40.2-201ENST00000390847 ASH1LQ9NR48 2969 aaKnown RBP0.39□□□□□ -2.35
SNORA40.2-201ENST00000390847 CD109Q6YHK3 1445 aa0.39□□□□□ -2.35
SNORA40.2-201ENST00000390847 CSN2P05814 226 aa0.39□□□□□ -2.35
SNORA40.2-201ENST00000390847 CCL4P13236 92 aa0.39□□□□□ -2.35
SNORA40.2-201ENST00000390847 TAS2R41P59536 307 aa0.39□□□□□ -2.35
SNORA40.2-201ENST00000390847 RPL37AP61513 92 aaKnown RBP0.39□□□□□ -2.35
SNORA40.2-201ENST00000390847 POU6F1Q14863 301 aa0.39□□□□□ -2.35
SNORA40.2-201ENST00000390847 ZDBF2Q9HCK1 2354 aa0.38□□□□□ -2.35
SNORA40.2-201ENST00000390847 H3BQV1 296 aa0.38□□□□□ -2.35
SNORA40.2-201ENST00000390847 LTC4SQ16873 150 aa0.38□□□□□ -2.35
SNORA40.2-201ENST00000390847 TSKUQ8WUA8 353 aa0.38□□□□□ -2.35
SNORA40.2-201ENST00000390847 PLAC4Q8WY50 150 aa0.38□□□□□ -2.35
SNORA40.2-201ENST00000390847 RMND5BQ96G75 393 aaPredicted RBP0.38□□□□□ -2.35
SNORA40.2-201ENST00000390847 OR4C12Q96R67 309 aa0.38□□□□□ -2.35
SNORA40.2-201ENST00000390847 EFCAB11Q9BUY7 163 aa0.38□□□□□ -2.35
SNORA40.2-201ENST00000390847 MED11Q9P086 117 aa0.38□□□□□ -2.35
SNORA40.2-201ENST00000390847 MYLKQ15746 1914 aa0.38□□□□□ -2.35
SNORA40.2-201ENST00000390847 A0A0J9YY99 117 aa0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 TCTAP57738 103 aa0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 MRPS36P82909 103 aaKnown RBP0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 NEDD8Q15843 81 aa0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 ZCCHC23Q6ZST2 131 aa0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 PLEKHB2Q96CS7 222 aa0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 BORCS8Q96FH0 119 aa0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 FAM103A1Q9BTL3 118 aaKnown RBP0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 LAMTOR3Q9UHA4 124 aa0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 UFC1Q9Y3C8 167 aa0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 NISCHQ9Y2I1 1504 aa0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 FANCMQ8IYD8 2048 aa0.37□□□□□ -2.35
SNORA40.2-201ENST00000390847 TRPM1Q7Z4N2 1603 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 KPNA4O00629 521 aaPredicted RBP0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 FABP4P15090 132 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 PDE6GP18545 87 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 GLRXP35754 106 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 CASC2Q6XLA1 102 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 LINC00269Q8N2A0 174 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 STX19Q8N4C7 294 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 FAM24BQ8N5W8 94 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 C5orf17Q8NAS9 161 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 DYDC1Q8WWB3 177 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 OTORQ9NRC9 128 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 NAT8BQ9UHF3 227 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 KCPQ6ZWJ8 1503 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 FRAS1Q86XX4 4008 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 FRMPD1Q5SYB0 1578 aa0.36□□□□□ -2.35
SNORA40.2-201ENST00000390847 ZGRF1Q86YA3 2104 aa0.35□□□□□ -2.35
SNORA40.2-201ENST00000390847 RTL9Q8NET4 1388 aa0.35□□□□□ -2.35
SNORA40.2-201ENST00000390847 C5orf58C9J3I9 102 aa0.35□□□□□ -2.35
SNORA40.2-201ENST00000390847 OR4B1Q8NGF8 309 aa0.35□□□□□ -2.35
SNORA40.2-201ENST00000390847 GRPEL2Q8TAA5 225 aa0.35□□□□□ -2.35
SNORA40.2-201ENST00000390847 MCEEQ96PE7 176 aa0.35□□□□□ -2.35
SNORA40.2-201ENST00000390847 UBR2Q8IWV8 1755 aa0.34□□□□□ -2.35
SNORA40.2-201ENST00000390847 C3orf85A0A1B0GTC6 90 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 SULT1C4O75897 302 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 KRTAP2-3P0C7H8 128 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 FABP2P12104 132 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 QRFPP83859 136 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 NUP210LQ5VU65 1888 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 LYG2Q86SG7 212 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 C10orf111Q8N326 155 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 OR5AK2Q8NH90 309 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 CARD19Q96LW7 228 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 KRTAP2-4Q9BYR9 128 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 KRTAP2-1Q9BYU5 128 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 N4BP2Q86UW6 1770 aaPredicted RBP0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 MUC5ACP98088 5654 aa0.34□□□□□ -2.36
SNORA40.2-201ENST00000390847 NAV2Q8IVL1 2488 aa0.33□□□□□ -2.36
SNORA40.2-201ENST00000390847 EIF3AQ14152 1382 aaKnown RBP0.33□□□□□ -2.36
SNORA40.2-201ENST00000390847 CAV3P56539 151 aa0.33□□□□□ -2.36
SNORA40.2-201ENST00000390847 PRR15Q8IV56 129 aa0.33□□□□□ -2.36
SNORA40.2-201ENST00000390847 CDC26Q8NHZ8 85 aa0.33□□□□□ -2.36
SNORA40.2-201ENST00000390847 AP1S3Q96PC3 154 aa0.33□□□□□ -2.36
SNORA40.2-201ENST00000390847 IL20Q9NYY1 176 aa0.33□□□□□ -2.36
SNORA40.2-201ENST00000390847 NUBP2Q9Y5Y2 271 aa0.33□□□□□ -2.36
SNORA40.2-201ENST00000390847 CACNA1EQ15878 2313 aa0.33□□□□□ -2.36
SNORA40.2-201ENST00000390847 TRACP01848 142 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms