RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 TRDV1A0A1B0GX56 115 aa1.47□□□□□ -2.17
RNU6-40P-201ENST00000384254 FAM107AO95990 144 aa1.47□□□□□ -2.17
RNU6-40P-201ENST00000384254 IFNA21P01568 189 aa1.47□□□□□ -2.17
RNU6-40P-201ENST00000384254 BCL2P10415 239 aa1.47□□□□□ -2.17
RNU6-40P-201ENST00000384254 CARD19Q96LW7 228 aa1.47□□□□□ -2.17
RNU6-40P-201ENST00000384254 TPRKBQ9Y3C4 175 aa1.47□□□□□ -2.17
RNU6-40P-201ENST00000384254 TECPR2O15040 1411 aa1.47□□□□□ -2.17
RNU6-40P-201ENST00000384254 RTL9Q8NET4 1388 aa1.47□□□□□ -2.17
RNU6-40P-201ENST00000384254 PGRMC1O00264 195 aaKnown RBP1.46□□□□□ -2.18
RNU6-40P-201ENST00000384254 VMA21Q3ZAQ7 101 aa1.46□□□□□ -2.18
RNU6-40P-201ENST00000384254 SMIM15Q7Z3B0 74 aa1.46□□□□□ -2.18
RNU6-40P-201ENST00000384254 ANGPTL5Q86XS5 388 aa1.46□□□□□ -2.18
RNU6-40P-201ENST00000384254 HSPB8Q9UJY1 196 aa1.46□□□□□ -2.18
RNU6-40P-201ENST00000384254 SNRNP200O75643 2136 aaKnown RBP1.46□□□□□ -2.18
RNU6-40P-201ENST00000384254 MYO18AQ92614 2054 aaKnown RBP1.46□□□□□ -2.18
RNU6-40P-201ENST00000384254 SIP14410 1827 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 A0A1W2PRE2 83 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 C5orf58C9J3I9 102 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 C5orf67F2Z3F1 127 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 S100A11P31949 105 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 SDC2P34741 201 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 TFAMQ00059 246 aaKnown RBP1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 PSMF1Q92530 271 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 LRTM1Q9HBL6 345 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 FBN3Q75N90 2809 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 NISCHQ9Y2I1 1504 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 EML5Q05BV3 1969 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 FREM3P0C091 2139 aa1.45□□□□□ -2.18
RNU6-40P-201ENST00000384254 TRAPPC8Q9Y2L5 1435 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 C9orf170A2RU37 121 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 GABARAPH6UMI1 98 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 PPYP01298 95 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 ZC2HC1AQ96GY0 325 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 OR4C12Q96R67 309 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 EFCAB11Q9BUY7 163 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 CST11Q9H112 138 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 WFDC10AQ9H1F0 79 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 RFX7Q2KHR2 1363 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 TENM1Q9UKZ4 2725 aa1.44□□□□□ -2.18
RNU6-40P-201ENST00000384254 E9PCH4 1651 aa1.43□□□□□ -2.18
RNU6-40P-201ENST00000384254 JMJD7-PLA2G4BH0Y9G9 81 aa1.43□□□□□ -2.18
RNU6-40P-201ENST00000384254 FABP4P15090 132 aa1.43□□□□□ -2.18
RNU6-40P-201ENST00000384254 DIAPH2-AS1Q14236 149 aa1.43□□□□□ -2.18
RNU6-40P-201ENST00000384254 OR5H6Q8NGV6 325 aa1.43□□□□□ -2.18
RNU6-40P-201ENST00000384254 SMPXQ9UHP9 88 aa1.43□□□□□ -2.18
RNU6-40P-201ENST00000384254 ZCCHC11Q5TAX3 1644 aaKnown RBP1.43□□□□□ -2.18
RNU6-40P-201ENST00000384254 PBRM1Q86U86 1689 aa1.42□□□□□ -2.18
RNU6-40P-201ENST00000384254 SPATA45Q537H7 98 aa1.42□□□□□ -2.18
RNU6-40P-201ENST00000384254 GRPEL2Q8TAA5 225 aa1.42□□□□□ -2.18
RNU6-40P-201ENST00000384254 LXNQ9BS40 222 aa1.42□□□□□ -2.18
RNU6-40P-201ENST00000384254 COL24A1Q17RW2 1714 aa1.42□□□□□ -2.18
RNU6-40P-201ENST00000384254 UNC13CQ8NB66 2214 aa1.42□□□□□ -2.18
RNU6-40P-201ENST00000384254 KIAA1107Q9UPP5 1409 aa1.41□□□□□ -2.18
RNU6-40P-201ENST00000384254 TRAV23DV6A0A075B6W5 121 aa1.41□□□□□ -2.18
RNU6-40P-201ENST00000384254 MIR22HGQ0VDD5 57 aa1.41□□□□□ -2.18
RNU6-40P-201ENST00000384254 LINC00305Q7Z4B0 112 aa1.41□□□□□ -2.18
RNU6-40P-201ENST00000384254 OR5AK2Q8NH90 309 aa1.41□□□□□ -2.18
RNU6-40P-201ENST00000384254 THEM6Q8WUY1 208 aa1.41□□□□□ -2.18
RNU6-40P-201ENST00000384254 RMND5BQ96G75 393 aaPredicted RBP1.41□□□□□ -2.18
RNU6-40P-201ENST00000384254 PRELID3AQ96N28 172 aa1.41□□□□□ -2.18
RNU6-40P-201ENST00000384254 NUP210Q8TEM1 1887 aaPredicted RBP1.41□□□□□ -2.18
RNU6-40P-201ENST00000384254 FRMPD1Q5SYB0 1578 aa1.4□□□□□ -2.19
RNU6-40P-201ENST00000384254 H7BYZ3 331 aa1.4□□□□□ -2.19
RNU6-40P-201ENST00000384254 TPT1P13693 172 aaKnown RBP1.4□□□□□ -2.19
RNU6-40P-201ENST00000384254 S100GP29377 79 aa1.4□□□□□ -2.19
RNU6-40P-201ENST00000384254 EFNA4P52798 201 aa1.4□□□□□ -2.19
RNU6-40P-201ENST00000384254 FOXI2Q6ZQN5 318 aa1.4□□□□□ -2.19
RNU6-40P-201ENST00000384254 DIRC1Q969H9 104 aa1.4□□□□□ -2.19
RNU6-40P-201ENST00000384254 IGLV3-1P01715 115 aa1.39□□□□□ -2.19
RNU6-40P-201ENST00000384254 TRACP01848 142 aa1.39□□□□□ -2.19
RNU6-40P-201ENST00000384254 TMEM128Q5BJH2 165 aa1.39□□□□□ -2.19
RNU6-40P-201ENST00000384254 SAMD13Q5VXD3 122 aa1.39□□□□□ -2.19
RNU6-40P-201ENST00000384254 TOMM20LQ6UXN7 152 aa1.39□□□□□ -2.19
RNU6-40P-201ENST00000384254 OR9Q1Q8NGQ5 310 aa1.39□□□□□ -2.19
RNU6-40P-201ENST00000384254 DDA1Q9BW61 102 aa1.39□□□□□ -2.19
RNU6-40P-201ENST00000384254 MED31Q9Y3C7 131 aa1.39□□□□□ -2.19
RNU6-40P-201ENST00000384254 ANKRD31Q8N7Z5 1873 aa1.38□□□□□ -2.19
RNU6-40P-201ENST00000384254 A0A1W2PPM0 123 aa1.38□□□□□ -2.19
RNU6-40P-201ENST00000384254 SRP9P49458 86 aaKnown RBP1.38□□□□□ -2.19
RNU6-40P-201ENST00000384254 LINC00299Q6ZSB3 139 aa1.38□□□□□ -2.19
RNU6-40P-201ENST00000384254 SKA2Q8WVK7 121 aaPredicted RBP1.38□□□□□ -2.19
RNU6-40P-201ENST00000384254 KRTAP4-1Q9BYQ7 146 aa1.38□□□□□ -2.19
RNU6-40P-201ENST00000384254 TRAV13-1A0A0B4J241 112 aa1.37□□□□□ -2.19
RNU6-40P-201ENST00000384254 TSTD3H0UI37 97 aa1.37□□□□□ -2.19
RNU6-40P-201ENST00000384254 IGHV3-33P01772 117 aa1.37□□□□□ -2.19
RNU6-40P-201ENST00000384254 MAXP61244 160 aa1.37□□□□□ -2.19
RNU6-40P-201ENST00000384254 OR10AC1Q8NH08 325 aa1.37□□□□□ -2.19
RNU6-40P-201ENST00000384254 TRAPPC2LQ9UL33 140 aa1.37□□□□□ -2.19
RNU6-40P-201ENST00000384254 BOKQ9UMX3 212 aaPredicted RBP1.37□□□□□ -2.19
RNU6-40P-201ENST00000384254 LAMA4Q16363 1823 aa1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 TRBV27A0A0K0K1C4 114 aa1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 H3BMG7 143 aa1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 POLR2HP52434 150 aaKnown RBP1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 LSM3P62310 102 aaKnown RBP1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 HRCT1Q6UXD1 115 aa1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 LINC00575Q6W349 94 aa1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 CASC2Q6XLA1 102 aa1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 LINC00269Q8N2A0 174 aa1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 TEX29Q8N6K0 151 aa1.36□□□□□ -2.19
RNU6-40P-201ENST00000384254 Q8N6K4 173 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms