RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 ZNF705FA8MVS1 300 aaPredicted RBP9.26□□□□□ -0.93
USP3-202ENST00000380324 CHEK1O14757 476 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 NUPR1O60356 82 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 HLA-DQA1P01909 254 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 IGHV4-31P0DP07 118 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 LOXL1Q08397 574 aaPredicted RBP9.26□□□□□ -0.93
USP3-202ENST00000380324 SLAQ13239 276 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 RNF182Q8N6D2 247 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 OR2D3Q8NGH3 330 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 Q96MF0 132 aa9.26□□□□□ -0.93
USP3-202ENST00000380324 ITPR3Q14573 2671 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 A8MWL6 223 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 J3QLI3 93 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 HIST2H2BCQ6DN03 193 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 PGLYRP4Q96LB8 373 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 SSBP4Q9BWG4 385 aaPredicted RBP9.25□□□□□ -0.93
USP3-202ENST00000380324 TP53TG3Q9ULZ0 132 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 ZFP30Q9Y2G7 519 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 PRRC2AP48634 2157 aaKnown RBP9.25□□□□□ -0.93
USP3-202ENST00000380324 RAB9AP51151 201 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 CT83Q5H943 113 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 GDF5OSQ5U4N7 250 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 UNQ9165/PRO28630Q6UXU0 137 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 TMEM190Q8WZ59 177 aa9.25□□□□□ -0.93
USP3-202ENST00000380324 BEX4Q9NWD9 120 aaPredicted RBP9.25□□□□□ -0.93
USP3-202ENST00000380324 TRBV6-1A0A0K0K1D8 114 aa9.24□□□□□ -0.93
USP3-202ENST00000380324 SERF1AO75920 110 aa9.24□□□□□ -0.93
USP3-202ENST00000380324 IGHG4P01861 327 aa9.24□□□□□ -0.93
USP3-202ENST00000380324 APCSP02743 223 aa9.24□□□□□ -0.93
USP3-202ENST00000380324 CT45A10P0DMU9 189 aa9.24□□□□□ -0.93
USP3-202ENST00000380324 SRIP30626 198 aa9.24□□□□□ -0.93
USP3-202ENST00000380324 COX19Q49B96 90 aa9.24□□□□□ -0.93
USP3-202ENST00000380324 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.24□□□□□ -0.93
USP3-202ENST00000380324 BAGE3Q86Y29 109 aa9.24□□□□□ -0.93
USP3-202ENST00000380324 TMEM18Q96B42 140 aa9.24□□□□□ -0.93
USP3-202ENST00000380324 SONP18583 2426 aaKnown RBP9.24□□□□□ -0.93
USP3-202ENST00000380324 NPIPB6E9PJ23 425 aa9.23□□□□□ -0.93
USP3-202ENST00000380324 LINC00310P59036 64 aa9.23□□□□□ -0.93
USP3-202ENST00000380324 VGLL1Q99990 258 aa9.23□□□□□ -0.93
USP3-202ENST00000380324 KMT2BQ9UMN6 2715 aaPredicted RBP9.23□□□□□ -0.93
USP3-202ENST00000380324 ZNF253O75346 499 aa9.23□□□□□ -0.93
USP3-202ENST00000380324 CRIP1P50238 77 aa9.23□□□□□ -0.93
USP3-202ENST00000380324 OR5R1Q8NH85 324 aa9.23□□□□□ -0.93
USP3-202ENST00000380324 HELZ2Q9BYK8 2649 aaKnown RBP9.23□□□□□ -0.93
USP3-202ENST00000380324 A0A087X0K7 114 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 SERTM2A0A1B0GWG4 89 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 H3BUA1 57 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 HBBP68871 147 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 LCN12Q6JVE5 192 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 RASL11AQ6T310 242 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 RBPMS2Q6ZRY4 209 aaKnown RBP9.22□□□□□ -0.93
USP3-202ENST00000380324 OR4X2Q8NGF9 303 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 WIPF2Q8TF74 440 aaPredicted RBP9.22□□□□□ -0.93
USP3-202ENST00000380324 USMG5Q96IX5 58 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 TPPP3Q9BW30 176 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 FLNAP21333 2647 aaKnown RBP9.22□□□□□ -0.93
USP3-202ENST00000380324 A0A1B0GXF2 115 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 PRAC2D3DTV9 90 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 C10orf99Q6UWK7 81 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 ATP5L2Q7Z4Y8 100 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 OR4B1Q8NGF8 309 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 GSN-AS1Q9NRJ2 163 aa9.22□□□□□ -0.93
USP3-202ENST00000380324 TMSB15BA0A087X1C1 80 aa9.21□□□□□ -0.93
USP3-202ENST00000380324 IGLV1-40P01703 118 aa9.21□□□□□ -0.93
USP3-202ENST00000380324 C1orf194Q5T5A4 169 aa9.21□□□□□ -0.93
USP3-202ENST00000380324 C8orf86Q6ZUL3 223 aa9.21□□□□□ -0.93
USP3-202ENST00000380324 LRRC75A-AS1Q8N1F1 130 aa9.21□□□□□ -0.93
USP3-202ENST00000380324 RCHY1Q96PM5 261 aa9.21□□□□□ -0.93
USP3-202ENST00000380324 ATP6V0BQ99437 205 aa9.21□□□□□ -0.93
USP3-202ENST00000380324 GFRA4Q9GZZ7 299 aa9.21□□□□□ -0.93
USP3-202ENST00000380324 MYO9AB2RTY4 2548 aa9.21□□□□□ -0.94
USP3-202ENST00000380324 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.21□□□□□ -0.94
USP3-202ENST00000380324 CFHR3Q02985 330 aa9.21□□□□□ -0.94
USP3-202ENST00000380324 ERCC8Q13216 396 aa9.21□□□□□ -0.94
USP3-202ENST00000380324 KRTAP1-3Q8IUG1 177 aa9.21□□□□□ -0.94
USP3-202ENST00000380324 PRR25Q96S07 402 aa9.21□□□□□ -0.94
USP3-202ENST00000380324 SLC50A1Q9BRV3 221 aa9.21□□□□□ -0.94
USP3-202ENST00000380324 SELENOKQ9Y6D0 94 aa9.21□□□□□ -0.94
USP3-202ENST00000380324 NDUFA4O00483 81 aa9.2□□□□□ -0.94
USP3-202ENST00000380324 SMAD7O15105 426 aaKnown RBP9.2□□□□□ -0.94
USP3-202ENST00000380324 C16orf54Q6UWD8 224 aa9.2□□□□□ -0.94
USP3-202ENST00000380324 VPREB3Q9UKI3 123 aa9.2□□□□□ -0.94
USP3-202ENST00000380324 SH2D1AO60880 128 aa9.2□□□□□ -0.94
USP3-202ENST00000380324 Q0VG73 95 aa9.2□□□□□ -0.94
USP3-202ENST00000380324 IQCJQ1A5X6 159 aa9.2□□□□□ -0.94
USP3-202ENST00000380324 FAM162BQ5T6X4 162 aa9.2□□□□□ -0.94
USP3-202ENST00000380324 DUX5Q96PT3 197 aa9.2□□□□□ -0.94
USP3-202ENST00000380324 SAMD10Q9BYL1 202 aa9.2□□□□□ -0.94
USP3-202ENST00000380324 U3KQE9 123 aa9.2□□□□□ -0.94
USP3-202ENST00000380324 TRAV8-2A0A0B4J237 113 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 A0A0G2JLM5 398 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 HOXA3O43365 443 aaPredicted RBP9.19□□□□□ -0.94
USP3-202ENST00000380324 FSHBP01225 129 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 SSTP61278 116 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 JOSD1Q15040 202 aaPredicted RBP9.19□□□□□ -0.94
USP3-202ENST00000380324 GLMPQ8WWB7 406 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 FAM231BA6NCW3 169 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 BRI3O95415 125 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 ARMS2P0C7Q2 107 aa9.19□□□□□ -0.94
USP3-202ENST00000380324 ZNF80P51504 273 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms