RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 TNFAIP6P98066 277 aaPredicted RBP5.74□□□□□ -1.49
DDX58-202ENST00000379883 CCL13Q99616 98 aa5.74□□□□□ -1.49
DDX58-202ENST00000379883 FER1L5A0AVI2 2057 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 IGHV3-21A0A0B4J1V1 117 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 RPL7P18124 248 aaKnown RBP5.73□□□□□ -1.49
DDX58-202ENST00000379883 PAX8Q06710 450 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 H3BRN7 92 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 M0QXV9 152 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 C10orf55Q5SWW7 151 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 SIGLEC15Q6ZMC9 328 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 C8orf49Q96NF6 230 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 TMEM133Q9H2Q1 129 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 YAE1D1Q9NRH1 226 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 ONECUT1Q9UBC0 465 aa5.73□□□□□ -1.49
DDX58-202ENST00000379883 CENPVL3A0A0U1RRI6 287 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 SLC25A16P16260 332 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 RPL13AP40429 203 aaKnown RBP5.72□□□□□ -1.49
DDX58-202ENST00000379883 MRPL23Q16540 153 aaKnown RBP5.72□□□□□ -1.49
DDX58-202ENST00000379883 MAPKAPK5-AS1Q8N8E1 139 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 ASCL2Q99929 193 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 ASCC3Q8N3C0 2202 aaKnown RBP5.72□□□□□ -1.49
DDX58-202ENST00000379883 K7EMI3 77 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 SLC25A20O43772 301 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 CFIP05156 583 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 PRTN3P24158 256 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 HLA-DMBP28068 263 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 Q1RN00 199 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 SHISA2Q6UWI4 295 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 ANKRD29Q8N6D5 301 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 RNF125Q96EQ8 232 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 SRSF8Q9BRL6 282 aaKnown RBP5.72□□□□□ -1.49
DDX58-202ENST00000379883 HES7Q9BYE0 225 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 MED12LQ86YW9 2145 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 FAM90A27PA6NNH2 459 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 CXCL12P48061 93 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 HES1Q14469 280 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 NFE4Q86UQ8 179 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 C8orf31Q8N9H6 132 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 GAFA1Q96PS6 74 aa5.72□□□□□ -1.49
DDX58-202ENST00000379883 NDUFB3O43676 98 aa5.71□□□□□ -1.49
DDX58-202ENST00000379883 LHBP01229 141 aa5.71□□□□□ -1.49
DDX58-202ENST00000379883 GATA3P23771 443 aa5.71□□□□□ -1.49
DDX58-202ENST00000379883 ATXN8Q156A1 80 aa5.71□□□□□ -1.49
DDX58-202ENST00000379883 MEIG1Q5JSS6 88 aa5.71□□□□□ -1.49
DDX58-202ENST00000379883 MORN3Q6PF18 240 aaPredicted RBP5.71□□□□□ -1.49
DDX58-202ENST00000379883 TIMD4Q96H15 378 aa5.71□□□□□ -1.49
DDX58-202ENST00000379883 ZNF71Q9NQZ8 489 aaPredicted RBP5.71□□□□□ -1.49
DDX58-202ENST00000379883 MRPL36Q9P0J6 103 aaKnown RBP5.71□□□□□ -1.49
DDX58-202ENST00000379883 A0A0C4DFX4 3053 aa5.71□□□□□ -1.49
DDX58-202ENST00000379883 CACNA1DQ01668 2161 aa5.71□□□□□ -1.49
DDX58-202ENST00000379883 PPP1R17O96001 155 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 CD40P25942 277 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 GATA4P43694 442 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 PRR30Q53SZ7 412 aaPredicted RBP5.71□□□□□ -1.5
DDX58-202ENST00000379883 LINC00311Q8N616 119 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 PRR25Q96S07 402 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 VKORC1Q9BQB6 163 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 ZNF785A8K8V0 405 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 LGALS1P09382 135 aaKnown RBP5.71□□□□□ -1.5
DDX58-202ENST00000379883 CRIP1P50238 77 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 ASCL5Q7RTU5 278 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 CITED1Q99966 193 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 HCFC1P51610 2035 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 TRAV2A0A0B4J234 112 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 LY6G6EA0A0G2JKS1 128 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 EPOPA6NHQ4 379 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 IGLC6P0CF74 106 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 IGFBP4P22692 258 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 UBE2D3P61077 147 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 UBE2D2P62837 147 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 PRO1854Q9UHT4 67 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 U3KQA8 63 aa5.71□□□□□ -1.5
DDX58-202ENST00000379883 M0R1B8 84 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 GLRXP35754 106 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 SPANXN1Q5VSR9 72 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 SFTA2Q6UW10 78 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 C1orf122Q6ZSJ8 110 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 PRADC1Q9BSG0 188 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 TNFRSF18Q9Y5U5 241 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 C9JAW5 83 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 DTX2Q86UW9 622 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 HIF1ANQ9NWT6 349 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.7□□□□□ -1.5
DDX58-202ENST00000379883 IGHV1-18A0A0C4DH31 117 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 E7EUB6 86 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 NTN3O00634 580 aaPredicted RBP5.7□□□□□ -1.5
DDX58-202ENST00000379883 EGR2P11161 476 aaPredicted RBP5.7□□□□□ -1.5
DDX58-202ENST00000379883 COX8CQ7Z4L0 72 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 SBSPONQ8IVN8 264 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 FAM216BQ8N7L0 139 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 PTH2Q96A98 100 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 CARD19Q96LW7 228 aa5.7□□□□□ -1.5
DDX58-202ENST00000379883 EML6Q6ZMW3 1958 aa5.69□□□□□ -1.5
DDX58-202ENST00000379883 TCL1BO95988 128 aa5.69□□□□□ -1.5
DDX58-202ENST00000379883 IGLV1-44P01699 117 aa5.69□□□□□ -1.5
DDX58-202ENST00000379883 COX6CP09669 75 aa5.69□□□□□ -1.5
DDX58-202ENST00000379883 SMCPP49901 116 aaPredicted RBP5.69□□□□□ -1.5
DDX58-202ENST00000379883 NDUFA11Q86Y39 141 aa5.69□□□□□ -1.5
DDX58-202ENST00000379883 C10orf126Q8N4M7 172 aa5.69□□□□□ -1.5
DDX58-202ENST00000379883 RNF185Q96GF1 192 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms