RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 PRSS47A8MTI9 375 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 Q6ZSV7 163 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 TMEM144Q7Z5S9 345 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 C11orf45Q8TAV5 145 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 MYO15AQ9UKN7 3530 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 GAGE12BA1L429 117 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 GAGE7O76087 117 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 GAGE12FP0CL80 117 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 GAGE12GP0CL81 117 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 GAGE12IP0CL82 117 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 ZNF146Q15072 292 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 LINC01006Q8NI28 216 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 SLC25A39Q9BZJ4 359 aaPredicted RBP5.22□□□□□ -1.57
NEDD9-202ENST00000379446 FNDC4Q9H6D8 234 aaPredicted RBP5.22□□□□□ -1.57
NEDD9-202ENST00000379446 IGLV2-18A0A075B6J9 118 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.22□□□□□ -1.57
NEDD9-202ENST00000379446 CTXND1A0A1B0GTU2 59 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 FOXA3P55318 350 aaPredicted RBP5.22□□□□□ -1.57
NEDD9-202ENST00000379446 RPL15P61313 204 aaKnown RBP5.22□□□□□ -1.57
NEDD9-202ENST00000379446 SERF2P84101 59 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 PMCHL1Q16048 86 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 MPV17L2Q567V2 206 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 SLC25A48Q6ZT89 311 aaKnown RBP5.22□□□□□ -1.57
NEDD9-202ENST00000379446 TOMM7Q9P0U1 55 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 CTSZQ9UBR2 303 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 TP73-AS1Q9UF72 201 aa5.22□□□□□ -1.57
NEDD9-202ENST00000379446 ZNF562Q6V9R5 426 aa5.21□□□□□ -1.57
NEDD9-202ENST00000379446 RPP25LQ8N5L8 163 aaKnown RBP5.21□□□□□ -1.57
NEDD9-202ENST00000379446 LYPD6BQ8NI32 183 aa5.21□□□□□ -1.57
NEDD9-202ENST00000379446 Q8TCH9 128 aa5.21□□□□□ -1.57
NEDD9-202ENST00000379446 RNASEH2CQ8TDP1 164 aaKnown RBP5.21□□□□□ -1.57
NEDD9-202ENST00000379446 SPSB4Q96A44 273 aa5.21□□□□□ -1.57
NEDD9-202ENST00000379446 SPART-AS1P0CW21 52 aa5.21□□□□□ -1.58
NEDD9-202ENST00000379446 SFRP2Q96HF1 295 aa5.21□□□□□ -1.58
NEDD9-202ENST00000379446 PRSS2P07478 247 aa5.21□□□□□ -1.58
NEDD9-202ENST00000379446 RNASE1P07998 156 aaKnown RBP5.21□□□□□ -1.58
NEDD9-202ENST00000379446 LGALS1P09382 135 aaKnown RBP5.21□□□□□ -1.58
NEDD9-202ENST00000379446 RNF125Q96EQ8 232 aa5.21□□□□□ -1.58
NEDD9-202ENST00000379446 RNF5Q99942 180 aa5.21□□□□□ -1.58
NEDD9-202ENST00000379446 SCRT1Q9BWW7 348 aa5.21□□□□□ -1.58
NEDD9-202ENST00000379446 TMEM167BQ9NRX6 74 aa5.21□□□□□ -1.58
NEDD9-202ENST00000379446 U3KQK5 164 aa5.21□□□□□ -1.58
NEDD9-202ENST00000379446 A0A1B0GW64 132 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 SCO2A0A1W2PP80 73 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 IGKV1-39P01597 117 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 IGKV1D-39P04432 117 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 LEPP41159 167 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 GNG4P50150 75 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 FOXE3Q13461 319 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 WDR73Q6P4I2 378 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 CST9LQ9H4G1 147 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 KNCNA6PVL3 124 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 IGF1P05019 195 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 PLP1P60201 277 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 ANKRD39Q53RE8 183 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 NABP2Q9BQ15 211 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 COL6A5A8TX70 2615 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 IGHV3-73A0A0B4J1V6 119 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 GAGE1Q13065 139 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 ZNF726P1Q15940 193 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 OCIAD2Q56VL3 154 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 MIC13Q5XKP0 118 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 TTC9CQ8N5M4 171 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 RMI2Q96E14 147 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 GTSF1LQ9H1H1 148 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 HSPB7Q9UBY9 170 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 LSM4Q9Y4Z0 139 aaKnown RBP5.2□□□□□ -1.58
NEDD9-202ENST00000379446 CPAMD8Q8IZJ3 1885 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 ITGB1BP1O14713 200 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 FRMD6-AS1P0C7T7 363 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 RBX1P62877 108 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 KRTAP24-1Q3LI83 254 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 OR10W1Q8NGF6 305 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 AJUBAQ96IF1 538 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 GGTLC1Q9BX51 225 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 COX11Q9Y6N1 276 aa5.2□□□□□ -1.58
NEDD9-202ENST00000379446 TRAV12-3A0A0B4J271 114 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 UPK2O00526 184 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 PQLC2Q6ZP29 291 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 ZNF114Q8NC26 417 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 PSMG3Q9BT73 122 aaPredicted RBP5.19□□□□□ -1.58
NEDD9-202ENST00000379446 SSBP4Q9BWG4 385 aaPredicted RBP5.19□□□□□ -1.58
NEDD9-202ENST00000379446 CSTL1Q9H114 145 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 RNASE7Q9H1E1 156 aaKnown RBP5.19□□□□□ -1.58
NEDD9-202ENST00000379446 TMEM238C9JI98 176 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 P01737 135 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 APCSP02743 223 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 C3orf79P0CE67 100 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 CNTFRP26992 372 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 CFAP161Q6P656 301 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 ZNF497Q6ZNH5 498 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 GOLT1AQ6ZVE7 132 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 OCC1Q8TAD7 63 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 IGF2BP2-AS1Q96M15 143 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 GPR82Q96P67 336 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 IFI27L2Q9H2X8 130 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 MRPL27Q9P0M9 148 aaKnown RBP5.19□□□□□ -1.58
NEDD9-202ENST00000379446 hDV102S1A0JD36 115 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 TMEM189A5PLL7 270 aa5.19□□□□□ -1.58
NEDD9-202ENST00000379446 SRRM4A7MD48 611 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms