RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 PRIMA1Q86XR5 153 aa8.8□□□□□ -1
LINC00654-201ENST00000379053 SIPA1L1O43166 1804 aa8.8□□□□□ -1
LINC00654-201ENST00000379053 TRBV25-1A0A075B6N4 114 aa8.8□□□□□ -1
LINC00654-201ENST00000379053 ELANEP08246 267 aa8.8□□□□□ -1
LINC00654-201ENST00000379053 ZNF581Q9P0T4 197 aa8.8□□□□□ -1
LINC00654-201ENST00000379053 SMPXQ9UHP9 88 aa8.8□□□□□ -1
LINC00654-201ENST00000379053 GREB1LQ9C091 1923 aaPredicted RBP8.8□□□□□ -1
LINC00654-201ENST00000379053 MUC6Q6W4X9 2439 aa8.8□□□□□ -1
LINC00654-201ENST00000379053 ARMS2P0C7Q2 107 aa8.79□□□□□ -1
LINC00654-201ENST00000379053 NDUFS6O75380 124 aaKnown RBP8.79□□□□□ -1
LINC00654-201ENST00000379053 RNF144BQ7Z419 303 aa8.79□□□□□ -1
LINC00654-201ENST00000379053 TSSC4Q9Y5U2 329 aaPredicted RBP8.79□□□□□ -1
LINC00654-201ENST00000379053 ATXN8Q156A1 80 aa8.79□□□□□ -1
LINC00654-201ENST00000379053 FER1L5A0AVI2 2057 aa8.79□□□□□ -1
LINC00654-201ENST00000379053 DEFB112Q30KQ8 113 aa8.79□□□□□ -1
LINC00654-201ENST00000379053 ERG28Q9UKR5 140 aa8.79□□□□□ -1
LINC00654-201ENST00000379053 PDCD11Q14690 1871 aaKnown RBP8.79□□□□□ -1
LINC00654-201ENST00000379053 BTCP35070 178 aa8.79□□□□□ -1
LINC00654-201ENST00000379053 NKAPP1Q8N9T2 125 aa8.79□□□□□ -1
LINC00654-201ENST00000379053 GREB1Q4ZG55 1949 aa8.79□□□□□ -1
LINC00654-201ENST00000379053 ITGB1BP1O14713 200 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 NDUFS7O75251 213 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 VWC2Q2TAL6 325 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 Q6ZR03 302 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 TRPT1Q86TN4 253 aaKnown RBP8.78□□□□□ -1
LINC00654-201ENST00000379053 HIST3H2BBQ8N257 126 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 LY6G5BQ8NDX9 201 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 PTPRQQ9UMZ3 2332 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 ORAOV1Q8WV07 137 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 VPREB3Q9UKI3 123 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 IGLV3-9A0A075B6K5 115 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 NDUFA4O00483 81 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 FREM3P0C091 2139 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 DUX4L9Q6RFH8 374 aaPredicted RBP8.78□□□□□ -1
LINC00654-201ENST00000379053 RPP25LQ8N5L8 163 aaKnown RBP8.78□□□□□ -1
LINC00654-201ENST00000379053 LCTP09848 1927 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 GRNP28799 593 aaKnown RBP8.78□□□□□ -1
LINC00654-201ENST00000379053 PDE6HQ13956 83 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 LINC01559Q495D7 138 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 SHISA2Q6UWI4 295 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 PRORYQ9H606 182 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 COL4A6Q14031 1691 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 C15orf62A8K5M9 175 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 LEPROTO15243 131 aa8.78□□□□□ -1
LINC00654-201ENST00000379053 COLCA2A8K830 154 aa8.77□□□□□ -1
LINC00654-201ENST00000379053 IGHV4-59P01825 116 aa8.77□□□□□ -1
LINC00654-201ENST00000379053 RPL32P62910 135 aaKnown RBP8.77□□□□□ -1
LINC00654-201ENST00000379053 TEX48A0A1B0GUV7 120 aa8.77□□□□□ -1.01
LINC00654-201ENST00000379053 YPEL3P61236 119 aaPredicted RBP8.77□□□□□ -1.01
LINC00654-201ENST00000379053 MRPL27Q9P0M9 148 aaKnown RBP8.77□□□□□ -1.01
LINC00654-201ENST00000379053 A0A096LPF7 62 aa8.77□□□□□ -1.01
LINC00654-201ENST00000379053 FGF16O43320 207 aa8.77□□□□□ -1.01
LINC00654-201ENST00000379053 SPXQ9BT56 116 aa8.77□□□□□ -1.01
LINC00654-201ENST00000379053 TMEM126AQ9H061 195 aa8.77□□□□□ -1.01
LINC00654-201ENST00000379053 DKK4Q9UBT3 224 aa8.77□□□□□ -1.01
LINC00654-201ENST00000379053 IGHV1OR15-1A0A075B7D0 117 aa8.77□□□□□ -1.01
LINC00654-201ENST00000379053 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.77□□□□□ -1.01
LINC00654-201ENST00000379053 SLX1AQ9BQ83 275 aa8.77□□□□□ -1.01
LINC00654-201ENST00000379053 TRAV12-2A0A075B6T6 113 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 TIMM21Q9BVV7 248 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 DOCK8Q8NF50 2099 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 HS3ST6Q96QI5 342 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 IGF2BP2-AS1Q96M15 143 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 PROK2Q9HC23 129 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 THSD7BQ9C0I4 1608 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 CDKN1BP46527 198 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 GAGE2BQ13066 116 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 GAGE2EQ4V326 116 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 FAM120AOSQ5T036 256 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 ZNF479Q96JC4 524 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 GAGE2DQ9UEU5 116 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 K7EM74 188 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 Q86TA4 180 aa8.76□□□□□ -1.01
LINC00654-201ENST00000379053 A8MWV9 139 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 SMKR1H3BMG3 65 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 CCL24O00175 119 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 GAGE6Q13070 117 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 TEX36Q5VZQ5 186 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 Q6ZS49 121 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 ZNF833PQ6ZTB9 187 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 THAP8Q8NA92 274 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 ZNRF2Q8NHG8 242 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 IGHV2-5P01817 119 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 C1orf194Q5T5A4 169 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 C8orf86Q6ZUL3 223 aa8.75□□□□□ -1.01
LINC00654-201ENST00000379053 CXCL1P09341 107 aa8.74□□□□□ -1.01
LINC00654-201ENST00000379053 PYY3Q5JQD4 70 aa8.74□□□□□ -1.01
LINC00654-201ENST00000379053 NAA38Q9BRA0 125 aaKnown RBP8.74□□□□□ -1.01
LINC00654-201ENST00000379053 SBF1O95248 1867 aa8.74□□□□□ -1.01
LINC00654-201ENST00000379053 SAMD5Q5TGI4 173 aa8.74□□□□□ -1.01
LINC00654-201ENST00000379053 TRBV24-1A0A075B6N3 115 aa8.74□□□□□ -1.01
LINC00654-201ENST00000379053 IGLV1-44P01699 117 aa8.74□□□□□ -1.01
LINC00654-201ENST00000379053 AMN1Q8IY45 258 aa8.74□□□□□ -1.01
LINC00654-201ENST00000379053 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
LINC00654-201ENST00000379053 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.74□□□□□ -1.01
LINC00654-201ENST00000379053 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
LINC00654-201ENST00000379053 NUP35Q8NFH5 326 aa8.74□□□□□ -1.01
LINC00654-201ENST00000379053 ZNF625Q96I27 306 aaPredicted RBP8.74□□□□□ -1.01
LINC00654-201ENST00000379053 FNDC10F2Z333 226 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms