RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 Q6ZS49 121 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 ZNF318Q5VUA4 2279 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 RNF7Q9UBF6 113 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 ACYP1P07311 99 aa9.48□□□□□ -0.89
NPHP4-202ENST00000378161 Q6ZQT7 251 aa9.48□□□□□ -0.89
NPHP4-202ENST00000378161 Q6ZR03 302 aa9.48□□□□□ -0.89
NPHP4-202ENST00000378161 C5orf63A6NC05 138 aa9.48□□□□□ -0.89
NPHP4-202ENST00000378161 MBD3L4A6NDZ8 208 aaPredicted RBP9.48□□□□□ -0.89
NPHP4-202ENST00000378161 MBD3L3A6NE82 208 aaPredicted RBP9.48□□□□□ -0.89
NPHP4-202ENST00000378161 MBD3L5A6NJ08 208 aaPredicted RBP9.48□□□□□ -0.89
NPHP4-202ENST00000378161 C8orf31Q8N9H6 132 aa9.48□□□□□ -0.89
NPHP4-202ENST00000378161 IGKV1-27A0A075B6S5 117 aa9.48□□□□□ -0.89
NPHP4-202ENST00000378161 hADV29S1A0JD25 119 aa9.48□□□□□ -0.89
NPHP4-202ENST00000378161 IGKV1-39P01597 117 aa9.48□□□□□ -0.89
NPHP4-202ENST00000378161 IGKV1D-39P04432 117 aa9.48□□□□□ -0.89
NPHP4-202ENST00000378161 ARMS2P0C7Q2 107 aa9.48□□□□□ -0.89
NPHP4-202ENST00000378161 C12orf77C9JDV5 145 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 NFE4Q86UQ8 179 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 SLC25A39Q9BZJ4 359 aaPredicted RBP9.47□□□□□ -0.89
NPHP4-202ENST00000378161 RS1O15537 224 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 FOXG1P55316 489 aaPredicted RBP9.47□□□□□ -0.89
NPHP4-202ENST00000378161 LOXL3P58215 753 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 GDF5OSQ5U4N7 250 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 LINC00477Q96M19 166 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 RBAKDNA6NC62 111 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 TCL1BO95988 128 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 MALP21145 153 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 KLF14Q8TD94 323 aaPredicted RBP9.47□□□□□ -0.89
NPHP4-202ENST00000378161 TMEM158Q8WZ71 300 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 ZNF524Q96C55 264 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 DENND4CQ5VZ89 1909 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 TRPT1Q86TN4 253 aaKnown RBP9.47□□□□□ -0.89
NPHP4-202ENST00000378161 KIR2DL5BQ8NHK3 375 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 TRGV9Q99603 122 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 ZNF492Q9P255 531 aa9.47□□□□□ -0.89
NPHP4-202ENST00000378161 PLA2G5P39877 138 aa9.46□□□□□ -0.89
NPHP4-202ENST00000378161 RPS28P62857 69 aaKnown RBP9.46□□□□□ -0.89
NPHP4-202ENST00000378161 ZFP2Q6ZN57 461 aa9.46□□□□□ -0.89
NPHP4-202ENST00000378161 DEFB124Q8NES8 71 aa9.46□□□□□ -0.89
NPHP4-202ENST00000378161 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.89
NPHP4-202ENST00000378161 PAPPA-AS1Q5QFB9 102 aa9.46□□□□□ -0.9
NPHP4-202ENST00000378161 LINC00526Q96FQ7 95 aa9.46□□□□□ -0.9
NPHP4-202ENST00000378161 DNAL4O96015 105 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 LYZP61626 148 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 LINC00305Q7Z4B0 112 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 AJUBAQ96IF1 538 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 HES7Q9BYE0 225 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 IGHV3OR15-7A0A075B7D8 119 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
NPHP4-202ENST00000378161 C3orf36Q3SXR2 165 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 LINC01620Q4KN68 170 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 DTX1Q86Y01 620 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 KLK5Q9Y337 293 aaPredicted RBP9.45□□□□□ -0.9
NPHP4-202ENST00000378161 VKORC1L1Q8N0U8 176 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 IGFBPL1Q8WX77 278 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 JPT2Q9H910 190 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 OTORQ9NRC9 128 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 MDFICQ9P1T7 246 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 TRAV12-3A0A0B4J271 114 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 COX7CP15954 63 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 FAM120AOSQ5T036 256 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 FOXL2NBQ6ZUU3 175 aa9.45□□□□□ -0.9
NPHP4-202ENST00000378161 TRAV41A0A0B4J266 112 aa9.44□□□□□ -0.9
NPHP4-202ENST00000378161 PFN2P35080 140 aa9.44□□□□□ -0.9
NPHP4-202ENST00000378161 COL4A6Q14031 1691 aa9.44□□□□□ -0.9
NPHP4-202ENST00000378161 FGFBP3Q8TAT2 258 aa9.44□□□□□ -0.9
NPHP4-202ENST00000378161 ROS1P08922 2347 aa9.44□□□□□ -0.9
NPHP4-202ENST00000378161 TIMM23O14925 209 aa9.44□□□□□ -0.9
NPHP4-202ENST00000378161 UTF1Q5T230 341 aa9.44□□□□□ -0.9
NPHP4-202ENST00000378161 CCL17Q92583 94 aa9.44□□□□□ -0.9
NPHP4-202ENST00000378161 IMUPQ9GZP8 106 aa9.44□□□□□ -0.9
NPHP4-202ENST00000378161 TRAV8-3A0A0A6YYJ7 113 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 IFI27L2Q9H2X8 130 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 Q9H3A6 140 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 WISP1O95388 367 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 ZNF329Q86UD4 541 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 TMEM243Q9BU79 118 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 A0A1B0GXF2 115 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 SMKR1H3BMG3 65 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 TRIP6Q15654 476 aaKnown RBP9.43□□□□□ -0.9
NPHP4-202ENST00000378161 FAM104BQ5XKR9 115 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 ZNF493Q6ZR52 646 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 PI4KAP42356 2102 aa9.43□□□□□ -0.9
NPHP4-202ENST00000378161 ZNF106Q9H2Y7 1883 aaKnown RBP9.43□□□□□ -0.9
NPHP4-202ENST00000378161 HIST1H4AP62805 103 aaKnown RBP9.42□□□□□ -0.9
NPHP4-202ENST00000378161 ZNF497Q6ZNH5 498 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 PEMTQ9UBM1 199 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 IGKV1-6A0A0C4DH72 117 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 CRLF1O75462 422 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 CARD19Q96LW7 228 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 PCDH15Q96QU1 1955 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 KNCNA6PVL3 124 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 WNT9BO14905 357 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 SLC25A16P16260 332 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 LAGE3Q14657 143 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 CR1LQ2VPA4 569 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 WFDC11Q8NEX6 87 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 C10orf105Q8TEF2 133 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 ZNF503Q96F45 646 aa9.42□□□□□ -0.9
NPHP4-202ENST00000378161 RETNQ9HD89 108 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms