RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 RBMY1BA6NDE4 496 aaKnown RBP14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 RBMY1EA6NEQ0 496 aaKnown RBP14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 RBMY1DP0C7P1 496 aaKnown RBP14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 RBMY1A1P0DJD3 496 aaKnown RBP14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 RBMY1CP0DJD4 496 aa14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 CHTOPQ9Y3Y2 248 aaKnown RBP14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 NDUFS7O75251 213 aa14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 CTSZQ9UBR2 303 aa14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 KRTAP27-1Q3LI81 207 aa14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 SMPXQ9UHP9 88 aa14.3□□□□□ -0.12
CLSTN1-202ENST00000377298 TRAV9-2A0A087WT02 112 aa14.3□□□□□ -0.12
CLSTN1-202ENST00000377298 NCR2O95944 276 aa14.3□□□□□ -0.12
CLSTN1-202ENST00000377298 MALRD1Q5VYJ5 2156 aa14.3□□□□□ -0.12
CLSTN1-202ENST00000377298 TMEM249Q2WGJ8 235 aa14.3□□□□□ -0.12
CLSTN1-202ENST00000377298 KIF26AQ9ULI4 1882 aaPredicted RBP14.3□□□□□ -0.12
CLSTN1-202ENST00000377298 VCYO14598 125 aa14.29□□□□□ -0.12
CLSTN1-202ENST00000377298 NDUFS6O75380 124 aaKnown RBP14.29□□□□□ -0.12
CLSTN1-202ENST00000377298 IGHV3-53P01767 116 aa14.29□□□□□ -0.12
CLSTN1-202ENST00000377298 ELANEP08246 267 aa14.29□□□□□ -0.12
CLSTN1-202ENST00000377298 TPSG1Q9NRR2 321 aa14.29□□□□□ -0.12
CLSTN1-202ENST00000377298 LHBP01229 141 aa14.29□□□□□ -0.12
CLSTN1-202ENST00000377298 IL17RELQ6ZVW7 336 aa14.29□□□□□ -0.12
CLSTN1-202ENST00000377298 RNF182Q8N6D2 247 aa14.29□□□□□ -0.12
CLSTN1-202ENST00000377298 TMEM75Q8N9X5 138 aa14.29□□□□□ -0.12
CLSTN1-202ENST00000377298 DIAPH2-AS1Q14236 149 aa14.29□□□□□ -0.12
CLSTN1-202ENST00000377298 TRBV19A0A075B6N1 114 aa14.28□□□□□ -0.12
CLSTN1-202ENST00000377298 ERCC8Q13216 396 aa14.28□□□□□ -0.12
CLSTN1-202ENST00000377298 Q6ZSR3 168 aa14.28□□□□□ -0.12
CLSTN1-202ENST00000377298 C2orf16Q68DN1 1984 aa14.28□□□□□ -0.12
CLSTN1-202ENST00000377298 IGHV3-73A0A0B4J1V6 119 aa14.28□□□□□ -0.12
CLSTN1-202ENST00000377298 IGKCP01834 107 aa14.28□□□□□ -0.12
CLSTN1-202ENST00000377298 FAM90A2PQ658T7 463 aa14.28□□□□□ -0.12
CLSTN1-202ENST00000377298 LURAP1LQ8IV03 231 aa14.28□□□□□ -0.12
CLSTN1-202ENST00000377298 GFRA4Q9GZZ7 299 aa14.28□□□□□ -0.12
CLSTN1-202ENST00000377298 C14orf178Q8N769 122 aaPredicted RBP14.27□□□□□ -0.12
CLSTN1-202ENST00000377298 H3BUA1 57 aa14.27□□□□□ -0.13
CLSTN1-202ENST00000377298 PRB1P04280 392 aa14.27□□□□□ -0.13
CLSTN1-202ENST00000377298 ADORA2A-AS1P86434 159 aa14.27□□□□□ -0.13
CLSTN1-202ENST00000377298 C10orf91Q5T1B1 145 aa14.27□□□□□ -0.13
CLSTN1-202ENST00000377298 TMEM256Q8N2U0 113 aa14.27□□□□□ -0.13
CLSTN1-202ENST00000377298 DEFB113Q30KQ7 82 aa14.27□□□□□ -0.13
CLSTN1-202ENST00000377298 MCRIP2Q9BUT9 160 aaKnown RBP14.27□□□□□ -0.13
CLSTN1-202ENST00000377298 DEFB130BP0DP73 79 aa14.27□□□□□ -0.13
CLSTN1-202ENST00000377298 DEFB130AP0DP74 79 aa14.27□□□□□ -0.13
CLSTN1-202ENST00000377298 HOXB4P17483 251 aaPredicted RBP14.27□□□□□ -0.13
CLSTN1-202ENST00000377298 SLC25A20O43772 301 aa14.26□□□□□ -0.13
CLSTN1-202ENST00000377298 GHRHP01286 108 aa14.26□□□□□ -0.13
CLSTN1-202ENST00000377298 OR11H6Q8NGC7 330 aa14.26□□□□□ -0.13
CLSTN1-202ENST00000377298 LINC00479Q96M42 142 aa14.26□□□□□ -0.13
CLSTN1-202ENST00000377298 ZNF492Q9P255 531 aa14.26□□□□□ -0.13
CLSTN1-202ENST00000377298 MED13LQ71F56 2210 aa14.26□□□□□ -0.13
CLSTN1-202ENST00000377298 WIPF3A6NGB9 483 aa14.26□□□□□ -0.13
CLSTN1-202ENST00000377298 APOMO95445 188 aa14.26□□□□□ -0.13
CLSTN1-202ENST00000377298 DOCK10Q96BY6 2186 aa14.25□□□□□ -0.13
CLSTN1-202ENST00000377298 TDGF1P3P51864 188 aa14.25□□□□□ -0.13
CLSTN1-202ENST00000377298 TCTEX1D4Q5JR98 221 aa14.25□□□□□ -0.13
CLSTN1-202ENST00000377298 TMEM14CQ9P0S9 112 aa14.25□□□□□ -0.13
CLSTN1-202ENST00000377298 HOXA3O43365 443 aaPredicted RBP14.25□□□□□ -0.13
CLSTN1-202ENST00000377298 ZNF664Q8N3J9 261 aa14.25□□□□□ -0.13
CLSTN1-202ENST00000377298 ARMS2P0C7Q2 107 aa14.25□□□□□ -0.13
CLSTN1-202ENST00000377298 FAM120AOSQ5T036 256 aa14.25□□□□□ -0.13
CLSTN1-202ENST00000377298 PLXNB3Q9ULL4 1909 aa14.25□□□□□ -0.13
CLSTN1-202ENST00000377298 H3BRN7 92 aa14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 MRPL27Q9P0M9 148 aaKnown RBP14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 DAZAP2Q15038 168 aaPredicted RBP14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 VPREB3Q9UKI3 123 aa14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 PTPRQQ9UMZ3 2332 aa14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 SEC11AP67812 179 aa14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 SLC25A2Q9BXI2 301 aa14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 FGF23Q9GZV9 251 aaPredicted RBP14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 C8orf86Q6ZUL3 223 aa14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 SEM1Q6ZVN7 128 aa14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 OR5A1Q8NGJ0 315 aa14.24□□□□□ -0.13
CLSTN1-202ENST00000377298 FAM231BA6NCW3 169 aa14.23□□□□□ -0.13
CLSTN1-202ENST00000377298 PFN1P07737 140 aaKnown RBP14.23□□□□□ -0.13
CLSTN1-202ENST00000377298 PLNP26678 52 aa14.23□□□□□ -0.13
CLSTN1-202ENST00000377298 THAP8Q8NA92 274 aa14.23□□□□□ -0.13
CLSTN1-202ENST00000377298 IGLC1P0CG04 106 aa14.23□□□□□ -0.13
CLSTN1-202ENST00000377298 IGHV4-61A0A0C4DH41 118 aa14.23□□□□□ -0.13
CLSTN1-202ENST00000377298 CKS1BP61024 79 aa14.23□□□□□ -0.13
CLSTN1-202ENST00000377298 DEFB112Q30KQ8 113 aa14.23□□□□□ -0.13
CLSTN1-202ENST00000377298 MS4A6AQ9H2W1 248 aa14.23□□□□□ -0.13
CLSTN1-202ENST00000377298 TMEM86BQ8N661 226 aa14.22□□□□□ -0.13
CLSTN1-202ENST00000377298 CSTL1Q9H114 145 aa14.22□□□□□ -0.13
CLSTN1-202ENST00000377298 SPCS1Q9Y6A9 102 aa14.22□□□□□ -0.13
CLSTN1-202ENST00000377298 NOTCH2Q04721 2471 aa14.22□□□□□ -0.13
CLSTN1-202ENST00000377298 RHODO00212 210 aa14.22□□□□□ -0.13
CLSTN1-202ENST00000377298 DLEU1O43261 78 aa14.22□□□□□ -0.13
CLSTN1-202ENST00000377298 ZNF815PA8K554 130 aa14.22□□□□□ -0.13
CLSTN1-202ENST00000377298 CT83Q5H943 113 aa14.22□□□□□ -0.13
CLSTN1-202ENST00000377298 MORN3Q6PF18 240 aaPredicted RBP14.22□□□□□ -0.13
CLSTN1-202ENST00000377298 TEX43Q6ZNM6 134 aa14.22□□□□□ -0.13
CLSTN1-202ENST00000377298 CD300EQ496F6 205 aaPredicted RBP14.21□□□□□ -0.13
CLSTN1-202ENST00000377298 XCL2Q9UBD3 114 aa14.21□□□□□ -0.13
CLSTN1-202ENST00000377298 SPOCK3Q9BQ16 436 aa14.21□□□□□ -0.13
CLSTN1-202ENST00000377298 SPRNQ5BIV9 151 aa14.21□□□□□ -0.13
CLSTN1-202ENST00000377298 LSM4Q9Y4Z0 139 aaKnown RBP14.21□□□□□ -0.13
CLSTN1-202ENST00000377298 SPINK13Q1W4C9 94 aa14.21□□□□□ -0.14
CLSTN1-202ENST00000377298 IGHV4-39P01824 125 aa14.2□□□□□ -0.14
CLSTN1-202ENST00000377298 FBXL19-AS1Q494R0 122 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms