RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 FAM90A27PA6NNH2 459 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 COX8AP10176 69 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 PCP4P48539 62 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 NPBQ8NG41 125 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 TRAV30A0A087WSZ9 112 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 HIST1H1AQ02539 215 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-202ENST00000376839 TCF15Q12870 199 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 C5orf64Q2M2E5 130 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 IGFL4Q6B9Z1 124 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 Q8TAT8 98 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 RAB1BQ9H0U4 201 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 SPTA1P02549 2419 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 PDE6HQ13956 83 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 FAM104BQ5XKR9 115 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 OR11H6Q8NGC7 330 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 PRELID3AQ96N28 172 aa10.34□□□□□ -0.75
ACTN1-202ENST00000376839 ASH1LQ9NR48 2969 aaKnown RBP10.33□□□□□ -0.76
ACTN1-202ENST00000376839 SMKR1H3BMG3 65 aa10.33□□□□□ -0.76
ACTN1-202ENST00000376839 GPR183P32249 361 aa10.33□□□□□ -0.76
ACTN1-202ENST00000376839 MFAP4P55083 255 aa10.33□□□□□ -0.76
ACTN1-202ENST00000376839 TCTAP57738 103 aa10.33□□□□□ -0.76
ACTN1-202ENST00000376839 RHOGP84095 191 aa10.33□□□□□ -0.76
ACTN1-202ENST00000376839 ANKRD39Q53RE8 183 aa10.33□□□□□ -0.76
ACTN1-202ENST00000376839 TMEM190Q8WZ59 177 aa10.33□□□□□ -0.76
ACTN1-202ENST00000376839 HRNRQ86YZ3 2850 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-202ENST00000376839 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
ACTN1-202ENST00000376839 MRPL51Q4U2R6 128 aaKnown RBP10.33□□□□□ -0.76
ACTN1-202ENST00000376839 U3KQK5 164 aa10.33□□□□□ -0.76
ACTN1-202ENST00000376839 PTPRZ1P23471 2315 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-202ENST00000376839 IGHV3OR16-8A0A075B7F1 116 aa10.32□□□□□ -0.76
ACTN1-202ENST00000376839 EGR2P11161 476 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-202ENST00000376839 ZNF80P51504 273 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-202ENST00000376839 VKORC1Q9BQB6 163 aa10.32□□□□□ -0.76
ACTN1-202ENST00000376839 NBASA2RRP1 2371 aa10.32□□□□□ -0.76
ACTN1-202ENST00000376839 AMMECR1LQ6DCA0 310 aa10.32□□□□□ -0.76
ACTN1-202ENST00000376839 ORMDL3Q8N138 153 aa10.32□□□□□ -0.76
ACTN1-202ENST00000376839 DYNAPQ8N1N2 210 aa10.32□□□□□ -0.76
ACTN1-202ENST00000376839 ARPC1AQ92747 370 aa10.32□□□□□ -0.76
ACTN1-202ENST00000376839 VGLL1Q99990 258 aa10.32□□□□□ -0.76
ACTN1-202ENST00000376839 C21orf62Q9NYP8 219 aa10.32□□□□□ -0.76
ACTN1-202ENST00000376839 WNK2Q9Y3S1 2297 aa10.32□□□□□ -0.76
ACTN1-202ENST00000376839 NPIPB5A8MRT5 1133 aa10.31□□□□□ -0.76
ACTN1-202ENST00000376839 FGF6P10767 208 aa10.31□□□□□ -0.76
ACTN1-202ENST00000376839 PRR25Q96S07 402 aa10.31□□□□□ -0.76
ACTN1-202ENST00000376839 ODF3BA8MYP8 253 aa10.31□□□□□ -0.76
ACTN1-202ENST00000376839 SMAD5-AS1Q9Y6J3 95 aa10.31□□□□□ -0.76
ACTN1-202ENST00000376839 IGHV3-35A0A0C4DH35 117 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 NCBP2LA6PVI3 153 aaKnown RBP10.3□□□□□ -0.76
ACTN1-202ENST00000376839 CD5LO43866 347 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 IGHG4P01861 327 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 CEACAM3P40198 252 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 CACNG7P62955 275 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 PSG9Q00887 426 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 ZNF575Q86XF7 245 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 MED13LQ71F56 2210 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 PTPRQQ9UMZ3 2332 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 TRAV8-6A0A0B4J262 113 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 NPYP01303 97 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 NHLH1Q02575 133 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 PAX8Q06710 450 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 ZNF562Q6V9R5 426 aa10.3□□□□□ -0.76
ACTN1-202ENST00000376839 ZNF48Q96MX3 618 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-202ENST00000376839 CDSNQ15517 529 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 MUC6Q6W4X9 2439 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 RPL7P18124 248 aaKnown RBP10.29□□□□□ -0.76
ACTN1-202ENST00000376839 TWIST1Q15672 202 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 COX8CQ7Z4L0 72 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 S100A7AQ86SG5 101 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 TTC9CQ8N5M4 171 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 MSRB1Q9NZV6 116 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 CACNA1BQ00975 2339 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 CTSGP08311 255 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 WFDC3Q8IUB2 231 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 FER1L6-AS1Q8NA97 138 aa10.29□□□□□ -0.76
ACTN1-202ENST00000376839 GAS8-AS1O95177 125 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 HBDP02042 147 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 PRTN3P24158 256 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 CKS2P33552 79 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 LGALS9BQ3B8N2 356 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 TMEM97Q5BJF2 176 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 SAPCD1Q5SSQ6 148 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 LGALS9CQ6DKI2 356 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 IGLC6P0CF74 106 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 CDKN1BP46527 198 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 UQCRFS1P47985 274 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 RNF151Q2KHN1 245 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 RABAC1Q9UI14 185 aa10.28□□□□□ -0.76
ACTN1-202ENST00000376839 C7orf71A4D174 169 aa10.27□□□□□ -0.77
ACTN1-202ENST00000376839 M0R1W7 72 aa10.27□□□□□ -0.77
ACTN1-202ENST00000376839 VMO1Q7Z5L0 202 aa10.27□□□□□ -0.77
ACTN1-202ENST00000376839 PSMG3-AS1Q96PY0 264 aa10.27□□□□□ -0.77
ACTN1-202ENST00000376839 PRAC2D3DTV9 90 aa10.26□□□□□ -0.77
ACTN1-202ENST00000376839 ERCC8Q13216 396 aa10.26□□□□□ -0.77
ACTN1-202ENST00000376839 Q8N6K4 173 aa10.26□□□□□ -0.77
ACTN1-202ENST00000376839 IFI27L1Q96BM0 104 aa10.26□□□□□ -0.77
ACTN1-202ENST00000376839 TIMD4Q96H15 378 aa10.26□□□□□ -0.77
ACTN1-202ENST00000376839 CST9LQ9H4G1 147 aa10.26□□□□□ -0.77
ACTN1-202ENST00000376839 PRSS57Q6UWY2 283 aa10.26□□□□□ -0.77
ACTN1-202ENST00000376839 BOD1L2Q8IYS8 172 aa10.26□□□□□ -0.77
ACTN1-202ENST00000376839 DPF1Q92782 380 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms