RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 BAGE3Q86Y29 109 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 FAM19A2Q8N3H0 131 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 PIP4P2Q8N4L2 257 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 ARPC1AQ92747 370 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 A0A087X0K7 114 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 LINC01546A6NGU7 62 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 ZNF253O75346 499 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 CRYBA4P53673 196 aa7.45□□□□□ -1.22
TRIM39-202ENST00000376659 ITLN2Q8WWU7 325 aaPredicted RBP7.45□□□□□ -1.22
TRIM39-202ENST00000376659 TRAV26-1A0A087WT03 109 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 UBE2G1P62253 170 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 ZNF502Q8TBZ5 544 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 C8orf49Q96NF6 230 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 LAMTOR2Q9Y2Q5 125 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 TRAV30A0A087WSZ9 112 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 IGLC3P0DOY3 106 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 HNRNPA3P51991 378 aaKnown RBP7.44□□□□□ -1.22
TRIM39-202ENST00000376659 Q6ZN92 141 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 GOLT1AQ6ZVE7 132 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 CCDC140Q96MF4 163 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 ASCL2Q99929 193 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 SRSF2Q01130 221 aaKnown RBP7.44□□□□□ -1.22
TRIM39-202ENST00000376659 OR4F17Q8NGA8 305 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 PIFOQ8TCI5 191 aa7.44□□□□□ -1.22
TRIM39-202ENST00000376659 CEACAM3P40198 252 aa7.43□□□□□ -1.22
TRIM39-202ENST00000376659 LINC00173Q6ZV60 143 aa7.43□□□□□ -1.22
TRIM39-202ENST00000376659 SERTAD4Q9NUC0 356 aa7.43□□□□□ -1.22
TRIM39-202ENST00000376659 IL4P05112 153 aa7.43□□□□□ -1.22
TRIM39-202ENST00000376659 SIGLECL1Q8N7X8 197 aa7.43□□□□□ -1.22
TRIM39-202ENST00000376659 A8MWL6 223 aa7.43□□□□□ -1.22
TRIM39-202ENST00000376659 SAP30O75446 220 aa7.43□□□□□ -1.22
TRIM39-202ENST00000376659 BPIFA4PQ86YQ2 179 aa7.43□□□□□ -1.22
TRIM39-202ENST00000376659 CNFNQ9BYD5 112 aa7.43□□□□□ -1.22
TRIM39-202ENST00000376659 ZNF331Q9NQX6 463 aaPredicted RBP7.43□□□□□ -1.22
TRIM39-202ENST00000376659 IGF2RP11717 2491 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 CACNA1BQ00975 2339 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 P01737 135 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 ARMS2P0C7Q2 107 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 AMTP48728 403 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 ZNF80P51504 273 aaPredicted RBP7.42□□□□□ -1.22
TRIM39-202ENST00000376659 UBE2E1P51965 193 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 FAM110DQ8TAY7 271 aaPredicted RBP7.42□□□□□ -1.22
TRIM39-202ENST00000376659 CHCHD1Q96BP2 118 aaKnown RBP7.42□□□□□ -1.22
TRIM39-202ENST00000376659 PGLYRP4Q96LB8 373 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 PSG8Q9UQ74 426 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 S4R3C0 116 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 U3KQE9 123 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 A0A1W2PRD5 423 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 A0A1W2PRF3 423 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 A0A1W2PRM7 423 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 CLEC3BP05452 202 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 IGLC6P0CF74 106 aa7.42□□□□□ -1.22
TRIM39-202ENST00000376659 M0R3E3 92 aa7.41□□□□□ -1.22
TRIM39-202ENST00000376659 PMCHP20382 165 aa7.41□□□□□ -1.22
TRIM39-202ENST00000376659 LINC01548A6NM66 108 aa7.41□□□□□ -1.22
TRIM39-202ENST00000376659 LCN12Q6JVE5 192 aa7.41□□□□□ -1.22
TRIM39-202ENST00000376659 PRNTQ86SH4 94 aa7.41□□□□□ -1.22
TRIM39-202ENST00000376659 ZNF479Q96JC4 524 aa7.41□□□□□ -1.22
TRIM39-202ENST00000376659 ABCA4P78363 2273 aa7.41□□□□□ -1.22
TRIM39-202ENST00000376659 RAB9AP51151 201 aa7.41□□□□□ -1.22
TRIM39-202ENST00000376659 C5orf56Q8N8D9 126 aa7.41□□□□□ -1.22
TRIM39-202ENST00000376659 COL12A1Q99715 3063 aa7.41□□□□□ -1.22
TRIM39-202ENST00000376659 TRAV8-2A0A0B4J237 113 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 SMAGPQ0VAQ4 97 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 OR1N2Q8NGR9 330 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 TIMD4Q96H15 378 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 GAGE12BA1L429 117 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 PRB4P10163 310 aaPredicted RBP7.4□□□□□ -1.22
TRIM39-202ENST00000376659 UQCRFS1P47985 274 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 MFAP4P55083 255 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 PMCHL1Q16048 86 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 SPATA45Q537H7 98 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 ATP6V0BQ99437 205 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 SAMD10Q9BYL1 202 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 NPFFR1Q9GZQ6 430 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 C21orf62Q9NYP8 219 aa7.4□□□□□ -1.22
TRIM39-202ENST00000376659 UBR5O95071 2799 aaPredicted RBP7.4□□□□□ -1.23
TRIM39-202ENST00000376659 KRTDAPP60985 99 aa7.4□□□□□ -1.23
TRIM39-202ENST00000376659 CCDC144NLQ6NUI1 221 aa7.4□□□□□ -1.23
TRIM39-202ENST00000376659 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.4□□□□□ -1.23
TRIM39-202ENST00000376659 CENPVL3A0A0U1RRI6 287 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 ATP6V0E1O15342 81 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 CNIH1O95406 144 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 EFNA4P52798 201 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 OR2T8A6NH00 312 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 SH2D1AO60880 128 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 BRI3O95415 125 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 SAA4P35542 130 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 CAMPP49913 170 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 UQCR10Q9UDW1 63 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 TP73-AS1Q9UF72 201 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 BUB3O43684 328 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 TOX4O94842 621 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 IGLL1P15814 213 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 HLA-DMBP28068 263 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 PLGLAQ15195 96 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 GPHB5Q86YW7 130 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 PRR25Q96S07 402 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 VGLL1Q99990 258 aa7.39□□□□□ -1.23
TRIM39-202ENST00000376659 IGKV2-40A0A087WW87 121 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms