RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 FCN2Q15485 313 aa10.33□□□□□ -0.76
HDAC6-204ENST00000376643 SSX7Q7RTT5 188 aa10.33□□□□□ -0.76
HDAC6-204ENST00000376643 NRARPQ7Z6K4 114 aa10.33□□□□□ -0.76
HDAC6-204ENST00000376643 ZNF680Q8NEM1 530 aa10.33□□□□□ -0.76
HDAC6-204ENST00000376643 RXFP4Q8TDU9 374 aa10.33□□□□□ -0.76
HDAC6-204ENST00000376643 TMEM37Q8WXS4 190 aa10.33□□□□□ -0.76
HDAC6-204ENST00000376643 PRELID1Q9Y255 219 aa10.33□□□□□ -0.76
HDAC6-204ENST00000376643 LSM5Q9Y4Y9 91 aaKnown RBP10.33□□□□□ -0.76
HDAC6-204ENST00000376643 NACAE9PAV3 2078 aa10.32□□□□□ -0.76
HDAC6-204ENST00000376643 FAT2Q9NYQ8 4349 aa10.32□□□□□ -0.76
HDAC6-204ENST00000376643 C16orf90A8MZG2 172 aa10.32□□□□□ -0.76
HDAC6-204ENST00000376643 LYRM1O43325 122 aa10.32□□□□□ -0.76
HDAC6-204ENST00000376643 MPDU1O75352 247 aa10.32□□□□□ -0.76
HDAC6-204ENST00000376643 RPL29P47914 159 aaKnown RBP10.32□□□□□ -0.76
HDAC6-204ENST00000376643 GFI1BQ5VTD9 330 aa10.32□□□□□ -0.76
HDAC6-204ENST00000376643 LINC00612Q8N6U2 182 aa10.32□□□□□ -0.76
HDAC6-204ENST00000376643 ZNF431Q8TF32 576 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-204ENST00000376643 WDR83OSQ9Y284 106 aa10.32□□□□□ -0.76
HDAC6-204ENST00000376643 LINC00588Q9Y4M8 146 aa10.32□□□□□ -0.76
HDAC6-204ENST00000376643 A0A1W2PPQ1 181 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 A6NHS1 94 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 NPIPB6E9PJ23 425 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 SLC25A5P05141 298 aaKnown RBP10.31□□□□□ -0.76
HDAC6-204ENST00000376643 SULT1A1P50225 295 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 BAXQ07812 192 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 ARL16Q0P5N6 197 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 DAZ2Q13117 558 aaKnown RBP10.31□□□□□ -0.76
HDAC6-204ENST00000376643 PDE6HQ13956 83 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 ATP6V1FQ16864 119 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 ZNF575Q86XF7 245 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 CHAC2Q8WUX2 184 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 SAT2Q96F10 170 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-204ENST00000376643 C2orf50Q96LR7 162 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 DNAH2Q9P225 4427 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 PKHD1P08F94 4074 aa10.31□□□□□ -0.76
HDAC6-204ENST00000376643 TRAV26-1A0A087WT03 109 aa10.3□□□□□ -0.76
HDAC6-204ENST00000376643 SLC17A3O00476 420 aa10.3□□□□□ -0.76
HDAC6-204ENST00000376643 CDK2AP2O75956 126 aa10.3□□□□□ -0.76
HDAC6-204ENST00000376643 TCRBP04435 133 aa10.3□□□□□ -0.76
HDAC6-204ENST00000376643 VWC2Q2TAL6 325 aa10.3□□□□□ -0.76
HDAC6-204ENST00000376643 SDHCQ99643 169 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-204ENST00000376643 UPK3BQ9BT76 320 aa10.3□□□□□ -0.76
HDAC6-204ENST00000376643 AAMDCQ9H7C9 122 aa10.3□□□□□ -0.76
HDAC6-204ENST00000376643 Q9H8V8 135 aa10.3□□□□□ -0.76
HDAC6-204ENST00000376643 LYRM2Q9NU23 88 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-204ENST00000376643 SLC39A9Q9NUM3 307 aa10.3□□□□□ -0.76
HDAC6-204ENST00000376643 NDUFA13Q9P0J0 144 aa10.3□□□□□ -0.76
HDAC6-204ENST00000376643 GAGE12BA1L429 117 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 CCSO14618 274 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 GAGE7O76087 117 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 CST7O76096 145 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 GAGE12FP0CL80 117 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 GAGE12GP0CL81 117 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 GAGE12IP0CL82 117 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 S100A10P60903 97 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 TNP2Q05952 138 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 MIC13Q5XKP0 118 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 LINC00477Q96M19 166 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 C18orf15Q96N68 181 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 KCNIP2Q9NS61 270 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 NUDT15Q9NV35 164 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 TMEM14CQ9P0S9 112 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 TIMM9Q9Y5J7 89 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 DNAH17Q9UFH2 4485 aa10.29□□□□□ -0.76
HDAC6-204ENST00000376643 TRGV2A0A075B6R0 118 aa10.28□□□□□ -0.76
HDAC6-204ENST00000376643 TRAV12-3A0A0B4J271 114 aa10.28□□□□□ -0.76
HDAC6-204ENST00000376643 UBE2L5PA0A1B0GUS4 154 aa10.28□□□□□ -0.76
HDAC6-204ENST00000376643 H3BQ15 152 aa10.28□□□□□ -0.76
HDAC6-204ENST00000376643 HIST1H1EP10412 219 aaKnown RBP10.28□□□□□ -0.76
HDAC6-204ENST00000376643 LINC00467Q9BRT7 94 aa10.28□□□□□ -0.76
HDAC6-204ENST00000376643 CCDC32Q9BV29 185 aa10.28□□□□□ -0.76
HDAC6-204ENST00000376643 Q9H3A6 140 aa10.28□□□□□ -0.76
HDAC6-204ENST00000376643 MUC4Q99102 2169 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 TRBV19A0A075B6N1 114 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 TRAV6A0A075B6T7 132 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 C7orf71A4D174 169 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 FAM24AA6NFZ4 105 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 PRAC2D3DTV9 90 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 H3BTX0 84 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 NMBP08949 121 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 SNRPCP09234 159 aaKnown RBP10.27□□□□□ -0.77
HDAC6-204ENST00000376643 CT45A10P0DMU9 189 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 MORN5Q5VZ52 161 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 MZT2BQ6NZ67 158 aa10.27□□□□□ -0.77
HDAC6-204ENST00000376643 MRPS16Q9Y3D3 137 aaKnown RBP10.27□□□□□ -0.77
HDAC6-204ENST00000376643 DNAH11Q96DT5 4516 aa10.26□□□□□ -0.77
HDAC6-204ENST00000376643 PCLOQ9Y6V0 5065 aa10.26□□□□□ -0.77
HDAC6-204ENST00000376643 A0A0J9YY99 117 aa10.26□□□□□ -0.77
HDAC6-204ENST00000376643 J3KRW8 73 aa10.26□□□□□ -0.77
HDAC6-204ENST00000376643 FGF7P21781 194 aa10.26□□□□□ -0.77
HDAC6-204ENST00000376643 ANXA2RQ3ZCQ2 193 aa10.26□□□□□ -0.77
HDAC6-204ENST00000376643 EIF4E3Q8N5X7 224 aaKnown RBP10.26□□□□□ -0.77
HDAC6-204ENST00000376643 TMEM252Q8N6L7 170 aa10.26□□□□□ -0.77
HDAC6-204ENST00000376643 ZNF586Q9NXT0 402 aa10.26□□□□□ -0.77
HDAC6-204ENST00000376643 TRAV5A0A0B4J249 113 aa10.25□□□□□ -0.77
HDAC6-204ENST00000376643 FAM240BA0A1B0GVZ2 78 aa10.25□□□□□ -0.77
HDAC6-204ENST00000376643 PLA2G10O15496 165 aa10.25□□□□□ -0.77
HDAC6-204ENST00000376643 H2AFB2P0C5Z0 115 aa10.25□□□□□ -0.77
HDAC6-204ENST00000376643 SLAQ13239 276 aa10.25□□□□□ -0.77
HDAC6-204ENST00000376643 IBA57Q5T440 356 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms