RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.84□□□□□ -0.19
HLA-DQB1-201ENST00000374943 CIARTQ8N365 385 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-201ENST00000374943 WIPF2Q8TF74 440 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-201ENST00000374943 SLC50A1Q9BRV3 221 aa13.84□□□□□ -0.19
HLA-DQB1-201ENST00000374943 XKRY2A2RUG3 117 aa13.83□□□□□ -0.2
HLA-DQB1-201ENST00000374943 TRBV12-3P01733 135 aa13.83□□□□□ -0.2
HLA-DQB1-201ENST00000374943 SMIM6P0DI80 62 aa13.83□□□□□ -0.2
HLA-DQB1-201ENST00000374943 GBGT1Q8N5D6 347 aa13.83□□□□□ -0.2
HLA-DQB1-201ENST00000374943 DAZAP1Q96EP5 407 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB1-201ENST00000374943 GFRA4Q9GZZ7 299 aa13.83□□□□□ -0.2
HLA-DQB1-201ENST00000374943 MRPL18Q9H0U6 180 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB1-201ENST00000374943 ITPR3Q14573 2671 aa13.83□□□□□ -0.2
HLA-DQB1-201ENST00000374943 ZNF785A8K8V0 405 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 A8MWL6 223 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 CHEK1O14757 476 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 APOHP02749 345 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 PSMB8P28062 276 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 GFI1BQ5VTD9 330 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 COX8CQ7Z4L0 72 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 NUP35Q8NFH5 326 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 OR4X2Q8NGF9 303 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 ZC2HC1AQ96GY0 325 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 NEU1Q99519 415 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 FAM231BA6NCW3 169 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 SNURFLB1AK76 121 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 TMEM95Q3KNT9 176 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 TMEM136Q6ZRR5 245 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 TEX29Q8N6K0 151 aa13.82□□□□□ -0.2
HLA-DQB1-201ENST00000374943 IGHV3-11P01762 117 aa13.81□□□□□ -0.2
HLA-DQB1-201ENST00000374943 FRMD6-AS1P0C7T7 363 aa13.81□□□□□ -0.2
HLA-DQB1-201ENST00000374943 ATP5L2Q7Z4Y8 100 aa13.81□□□□□ -0.2
HLA-DQB1-201ENST00000374943 GLMPQ8WWB7 406 aa13.81□□□□□ -0.2
HLA-DQB1-201ENST00000374943 GPR61Q9BZJ8 451 aa13.81□□□□□ -0.2
HLA-DQB1-201ENST00000374943 HIGD1CA8MV81 97 aa13.8□□□□□ -0.2
HLA-DQB1-201ENST00000374943 ZNF207O43670 478 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB1-201ENST00000374943 HLA-DQA1P01909 254 aa13.8□□□□□ -0.2
HLA-DQB1-201ENST00000374943 SLC35B1P78383 322 aa13.8□□□□□ -0.2
HLA-DQB1-201ENST00000374943 Q71RC1 249 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-201ENST00000374943 WFDC11Q8NEX6 87 aa13.8□□□□□ -0.2
HLA-DQB1-201ENST00000374943 MRPL53Q96EL3 112 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB1-201ENST00000374943 C12orf57Q99622 126 aa13.8□□□□□ -0.2
HLA-DQB1-201ENST00000374943 MXRA5Q9NR99 2828 aa13.8□□□□□ -0.2
HLA-DQB1-201ENST00000374943 IGHV3-66A0A0C4DH42 116 aa13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 RBAKDNA6NC62 111 aa13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 HOXA3O43365 443 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 SPINK4O60575 86 aa13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 S100A2P29034 98 aa13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 SAPCD1Q5SSQ6 148 aa13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 MRPL54Q6P161 138 aaKnown RBP13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 UNQ9165/PRO28630Q6UXU0 137 aa13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 NPFFR1Q9GZQ6 430 aa13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 ZNF702PQ9H963 129 aa13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 IGKV2-40A0A087WW87 121 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 IGKV2D-40P01614 121 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 LCN12Q6JVE5 192 aa13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 CLEC5AQ9NY25 188 aa13.79□□□□□ -0.2
HLA-DQB1-201ENST00000374943 A0A1B0GXF2 115 aa13.78□□□□□ -0.2
HLA-DQB1-201ENST00000374943 HLA-DMBP28068 263 aa13.78□□□□□ -0.2
HLA-DQB1-201ENST00000374943 LCNL1Q6ZST4 164 aa13.78□□□□□ -0.2
HLA-DQB1-201ENST00000374943 PEF1Q9UBV8 284 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB1-201ENST00000374943 IGHV3OR16-13A0A075B7E8 117 aa13.77□□□□□ -0.21
HLA-DQB1-201ENST00000374943 IGHV3-49A0A0A0MS15 119 aa13.77□□□□□ -0.21
HLA-DQB1-201ENST00000374943 IGHV3-74A0A0B4J1X5 117 aa13.77□□□□□ -0.21
HLA-DQB1-201ENST00000374943 CT45A10P0DMU9 189 aa13.77□□□□□ -0.21
HLA-DQB1-201ENST00000374943 C8orf86Q6ZUL3 223 aa13.77□□□□□ -0.21
HLA-DQB1-201ENST00000374943 GTSF1Q8WW33 167 aa13.77□□□□□ -0.21
HLA-DQB1-201ENST00000374943 PRR25Q96S07 402 aa13.77□□□□□ -0.21
HLA-DQB1-201ENST00000374943 PDZD2O15018 2839 aa13.77□□□□□ -0.21
HLA-DQB1-201ENST00000374943 TRAV8-2A0A0B4J237 113 aa13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 A0A1W2PS18 150 aa13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 CRIP1P50238 77 aa13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 FOXA3P55318 350 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 PDZD11Q5EBL8 140 aa13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 IGFL4Q6B9Z1 124 aa13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 RBPMS2Q6ZRY4 209 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 TCF24Q7RTU0 167 aa13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 OR2D3Q8NGH3 330 aa13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 MYOZ3Q8TDC0 251 aa13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 C8orf49Q96NF6 230 aa13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 HIST1H2BLQ99880 126 aa13.76□□□□□ -0.21
HLA-DQB1-201ENST00000374943 ZNF705FA8MVS1 300 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQB1-201ENST00000374943 ELANEP08246 267 aa13.75□□□□□ -0.21
HLA-DQB1-201ENST00000374943 FOXE3Q13461 319 aa13.75□□□□□ -0.21
HLA-DQB1-201ENST00000374943 Q8N2B8 174 aa13.75□□□□□ -0.21
HLA-DQB1-201ENST00000374943 TMEM86BQ8N661 226 aa13.75□□□□□ -0.21
HLA-DQB1-201ENST00000374943 FOXC2Q99958 501 aa13.75□□□□□ -0.21
HLA-DQB1-201ENST00000374943 VGLL1Q99990 258 aa13.75□□□□□ -0.21
HLA-DQB1-201ENST00000374943 K7EMT4 169 aa13.75□□□□□ -0.21
HLA-DQB1-201ENST00000374943 SMAD7O15105 426 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB1-201ENST00000374943 FABP4P15090 132 aa13.74□□□□□ -0.21
HLA-DQB1-201ENST00000374943 CRISP2P16562 243 aa13.74□□□□□ -0.21
HLA-DQB1-201ENST00000374943 RAB4BP61018 213 aa13.74□□□□□ -0.21
HLA-DQB1-201ENST00000374943 Q0VG73 95 aa13.74□□□□□ -0.21
HLA-DQB1-201ENST00000374943 GPHB5Q86YW7 130 aa13.74□□□□□ -0.21
HLA-DQB1-201ENST00000374943 RNF182Q8N6D2 247 aa13.74□□□□□ -0.21
HLA-DQB1-201ENST00000374943 RNF152Q8N8N0 203 aa13.74□□□□□ -0.21
HLA-DQB1-201ENST00000374943 ASCL2Q99929 193 aa13.74□□□□□ -0.21
HLA-DQB1-201ENST00000374943 DAZ1Q9NQZ3 744 aaKnown RBP13.74□□□□□ -0.21
HLA-DQB1-201ENST00000374943 IGHV7-4-1A0A0J9YVY3 117 aa13.73□□□□□ -0.21
HLA-DQB1-201ENST00000374943 PRAC2D3DTV9 90 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms