RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PGLYRP4Q96LB8 373 aa9.42□□□□□ -0.9
HMGCL-202ENST00000374487 SSBP4Q9BWG4 385 aaPredicted RBP9.42□□□□□ -0.9
HMGCL-202ENST00000374487 GFRA4Q9GZZ7 299 aa9.42□□□□□ -0.9
HMGCL-202ENST00000374487 NF1P21359 2839 aa9.42□□□□□ -0.9
HMGCL-202ENST00000374487 IGHV3-35A0A0C4DH35 117 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 TRBV6-1A0A0K0K1D8 114 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 DIRC3C9JPN6 131 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 M0R3E3 92 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 PRB4P10163 310 aaPredicted RBP9.41□□□□□ -0.9
HMGCL-202ENST00000374487 GPR183P32249 361 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 PSG9Q00887 426 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 LOXL1Q08397 574 aaPredicted RBP9.41□□□□□ -0.9
HMGCL-202ENST00000374487 FAM209BQ5JX69 171 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 GDF5OSQ5U4N7 250 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
HMGCL-202ENST00000374487 Q6ZWC4 215 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 GTSF1Q8WW33 167 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 PSG8Q9UQ74 426 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 POLR3KQ9Y2Y1 108 aaPredicted RBP9.41□□□□□ -0.9
HMGCL-202ENST00000374487 NIPBLQ6KC79 2804 aaeCLIP9.41□□□□□ -0.9
HMGCL-202ENST00000374487 SH2D7A6NKC9 451 aaPredicted RBP9.41□□□□□ -0.9
HMGCL-202ENST00000374487 NDUFS8O00217 210 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 GPX1P07203 203 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 CD33P20138 364 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 AMTP48728 403 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 PAX8Q06710 450 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 OR4B1Q8NGF8 309 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 KCNS1Q96KK3 526 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 NOL4LQ96MY1 436 aaPredicted RBP9.41□□□□□ -0.9
HMGCL-202ENST00000374487 RCHY1Q96PM5 261 aa9.41□□□□□ -0.9
HMGCL-202ENST00000374487 SOX21Q9Y651 276 aaPredicted RBP9.41□□□□□ -0.9
HMGCL-202ENST00000374487 SETD2Q9BYW2 2564 aaPredicted RBP9.41□□□□□ -0.9
HMGCL-202ENST00000374487 FN1P02751 2386 aaKnown RBP9.41□□□□□ -0.9
HMGCL-202ENST00000374487 IGHV3OR16-8A0A075B7F1 116 aa9.4□□□□□ -0.9
HMGCL-202ENST00000374487 A0A1W2PS18 150 aa9.4□□□□□ -0.9
HMGCL-202ENST00000374487 FAM231BA6NCW3 169 aa9.4□□□□□ -0.9
HMGCL-202ENST00000374487 G3V318 75 aa9.4□□□□□ -0.9
HMGCL-202ENST00000374487 CLEC3BP05452 202 aa9.4□□□□□ -0.9
HMGCL-202ENST00000374487 PMCHP20382 165 aa9.4□□□□□ -0.9
HMGCL-202ENST00000374487 ZC2HC1AQ96GY0 325 aa9.4□□□□□ -0.9
HMGCL-202ENST00000374487 YAE1D1Q9NRH1 226 aa9.4□□□□□ -0.9
HMGCL-202ENST00000374487 ABCA2Q9BZC7 2435 aa9.4□□□□□ -0.9
HMGCL-202ENST00000374487 IGHV1-69DA0A0B4J2H0 117 aa9.4□□□□□ -0.91
HMGCL-202ENST00000374487 A0A1B0GXF2 115 aa9.4□□□□□ -0.91
HMGCL-202ENST00000374487 LINC01548A6NM66 108 aa9.4□□□□□ -0.91
HMGCL-202ENST00000374487 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.91
HMGCL-202ENST00000374487 IGHV1-69P01742 117 aa9.4□□□□□ -0.91
HMGCL-202ENST00000374487 IL17RELQ6ZVW7 336 aa9.4□□□□□ -0.91
HMGCL-202ENST00000374487 TMEM219Q86XT9 240 aa9.4□□□□□ -0.91
HMGCL-202ENST00000374487 C5orf56Q8N8D9 126 aa9.4□□□□□ -0.91
HMGCL-202ENST00000374487 ZNF502Q8TBZ5 544 aa9.4□□□□□ -0.91
HMGCL-202ENST00000374487 ASCL2Q99929 193 aa9.4□□□□□ -0.91
HMGCL-202ENST00000374487 CT45A10P0DMU9 189 aa9.39□□□□□ -0.91
HMGCL-202ENST00000374487 TOMM20LQ6UXN7 152 aa9.39□□□□□ -0.91
HMGCL-202ENST00000374487 BRD3OSQ6XYD6 125 aa9.39□□□□□ -0.91
HMGCL-202ENST00000374487 C18orf32Q8TCD1 76 aa9.39□□□□□ -0.91
HMGCL-202ENST00000374487 TRAV40A0A0B4J280 105 aa9.39□□□□□ -0.91
HMGCL-202ENST00000374487 SERTM2A0A1B0GWG4 89 aa9.39□□□□□ -0.91
HMGCL-202ENST00000374487 A8MWP6 167 aa9.39□□□□□ -0.91
HMGCL-202ENST00000374487 KRTDAPP60985 99 aa9.39□□□□□ -0.91
HMGCL-202ENST00000374487 SONP18583 2426 aaKnown RBP9.39□□□□□ -0.91
HMGCL-202ENST00000374487 CHEK1O14757 476 aa9.38□□□□□ -0.91
HMGCL-202ENST00000374487 ZNF324O75467 553 aaPredicted RBP9.38□□□□□ -0.91
HMGCL-202ENST00000374487 TGFAP01135 160 aa9.38□□□□□ -0.91
HMGCL-202ENST00000374487 CLEC19AQ6UXS0 136 aa9.38□□□□□ -0.91
HMGCL-202ENST00000374487 EEF1AKMT3Q96AZ1 226 aa9.38□□□□□ -0.91
HMGCL-202ENST00000374487 C14orf144Q96I85 54 aa9.38□□□□□ -0.91
HMGCL-202ENST00000374487 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
HMGCL-202ENST00000374487 NRN1Q9NPD7 142 aa9.38□□□□□ -0.91
HMGCL-202ENST00000374487 MOB4Q9Y3A3 225 aa9.38□□□□□ -0.91
HMGCL-202ENST00000374487 CD5LO43866 347 aa9.37□□□□□ -0.91
HMGCL-202ENST00000374487 NTF3P20783 257 aa9.37□□□□□ -0.91
HMGCL-202ENST00000374487 ZNF785A8K8V0 405 aa9.37□□□□□ -0.91
HMGCL-202ENST00000374487 HSBP1O75506 76 aa9.37□□□□□ -0.91
HMGCL-202ENST00000374487 RAB9AP51151 201 aa9.37□□□□□ -0.91
HMGCL-202ENST00000374487 KLF5Q13887 457 aaPredicted RBP9.37□□□□□ -0.91
HMGCL-202ENST00000374487 PRR31Q5SQ13 230 aa9.37□□□□□ -0.91
HMGCL-202ENST00000374487 CYB5R2Q6BCY4 276 aa9.37□□□□□ -0.91
HMGCL-202ENST00000374487 REC114Q7Z4M0 266 aa9.37□□□□□ -0.91
HMGCL-202ENST00000374487 FAM19A2Q8N3H0 131 aa9.37□□□□□ -0.91
HMGCL-202ENST00000374487 IGKV2-40A0A087WW87 121 aaPredicted RBP9.36□□□□□ -0.91
HMGCL-202ENST00000374487 TRBV7-1A0A0A6YYK4 115 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 IGKV2D-40P01614 121 aaPredicted RBP9.36□□□□□ -0.91
HMGCL-202ENST00000374487 ATP5G2Q06055 141 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 KLK9Q2XQG4 91 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 C1orf194Q5T5A4 169 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 BORCS7Q96B45 105 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 C8orf49Q96NF6 230 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 KLK9Q9UKQ9 250 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 SMAD5-AS1Q9Y6J3 95 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 NSD1Q96L73 2696 aaPredicted RBP9.36□□□□□ -0.91
HMGCL-202ENST00000374487 TRAV41A0A0B4J266 112 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 A0A1B0GUT8 65 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 HAX1O00165 279 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 CRIP1P50238 77 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 FOXA3P55318 350 aaPredicted RBP9.36□□□□□ -0.91
HMGCL-202ENST00000374487 RELQ04864 619 aaPredicted RBP9.36□□□□□ -0.91
HMGCL-202ENST00000374487 SAPCD1Q5SSQ6 148 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 RNASEKQ6P5S7 137 aaKnown RBP9.36□□□□□ -0.91
HMGCL-202ENST00000374487 C16orf54Q6UWD8 224 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms