RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 CAMLGP49069 296 aa11.24□□□□□ -0.61
HDAC8-202ENST00000373556 BCAP31P51572 246 aa11.24□□□□□ -0.61
HDAC8-202ENST00000373556 SSX7Q7RTT5 188 aa11.24□□□□□ -0.61
HDAC8-202ENST00000373556 C20orf85Q9H1P6 137 aa11.24□□□□□ -0.61
HDAC8-202ENST00000373556 TRAV26-1A0A087WT03 109 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 A0A0J9YY99 117 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 GAGE12BA1L429 117 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 GAGE7O76087 117 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 CST7O76096 145 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 GAGE12FP0CL80 117 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 GAGE12GP0CL81 117 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 GAGE12IP0CL82 117 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 ZNF846Q147U1 533 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 MIC13Q5XKP0 118 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 NRARPQ7Z6K4 114 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 CCDC28AQ8IWP9 274 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 GNPNAT1Q96EK6 184 aaPredicted RBP11.23□□□□□ -0.61
HDAC8-202ENST00000373556 SAT2Q96F10 170 aaPredicted RBP11.23□□□□□ -0.61
HDAC8-202ENST00000373556 C20orf144Q9BQM9 153 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 PXMP4Q9Y6I8 212 aa11.23□□□□□ -0.61
HDAC8-202ENST00000373556 PLA2G10O15496 165 aa11.22□□□□□ -0.61
HDAC8-202ENST00000373556 CT45A10P0DMU9 189 aa11.22□□□□□ -0.61
HDAC8-202ENST00000373556 HOXA5P20719 270 aa11.22□□□□□ -0.61
HDAC8-202ENST00000373556 CAV2P51636 162 aa11.22□□□□□ -0.61
HDAC8-202ENST00000373556 LINC00612Q8N6U2 182 aa11.22□□□□□ -0.61
HDAC8-202ENST00000373556 DNAJC4Q9NNZ3 241 aa11.22□□□□□ -0.61
HDAC8-202ENST00000373556 TRAV12-3A0A0B4J271 114 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 FAM24AA6NFZ4 105 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 SNURFLB1AK76 121 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 RLN2P04090 185 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 M6PRP20645 277 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 CNPY1Q3B7I2 92 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 Q6ZRG5 221 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 SEC22CQ9BRL7 303 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 KRTAP1-5Q9BYS1 174 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 Q9H8V8 135 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 ZNF586Q9NXT0 402 aa11.21□□□□□ -0.61
HDAC8-202ENST00000373556 TRAV6A0A075B6T7 132 aa11.2□□□□□ -0.62
HDAC8-202ENST00000373556 C5orf51A6NDU8 294 aa11.2□□□□□ -0.62
HDAC8-202ENST00000373556 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
HDAC8-202ENST00000373556 LYRM1O43325 122 aa11.2□□□□□ -0.62
HDAC8-202ENST00000373556 LEPP41159 167 aa11.2□□□□□ -0.62
HDAC8-202ENST00000373556 RAB31Q13636 194 aa11.2□□□□□ -0.62
HDAC8-202ENST00000373556 RXFP4Q8TDU9 374 aa11.2□□□□□ -0.62
HDAC8-202ENST00000373556 C11orf1Q9H5F2 150 aa11.2□□□□□ -0.62
HDAC8-202ENST00000373556 UQCC1Q9NVA1 299 aa11.2□□□□□ -0.62
HDAC8-202ENST00000373556 WDR83OSQ9Y284 106 aa11.2□□□□□ -0.62
HDAC8-202ENST00000373556 UBE2L5PA0A1B0GUS4 154 aa11.19□□□□□ -0.62
HDAC8-202ENST00000373556 TCRBP04435 133 aa11.19□□□□□ -0.62
HDAC8-202ENST00000373556 GUK1Q16774 197 aa11.19□□□□□ -0.62
HDAC8-202ENST00000373556 OR1L4Q8NGR5 311 aa11.19□□□□□ -0.62
HDAC8-202ENST00000373556 ZNF431Q8TF32 576 aaPredicted RBP11.19□□□□□ -0.62
HDAC8-202ENST00000373556 TMPRSS5Q9H3S3 457 aa11.19□□□□□ -0.62
HDAC8-202ENST00000373556 APOBP04114 4563 aaKnown RBP11.19□□□□□ -0.62
HDAC8-202ENST00000373556 DNAH5Q8TE73 4624 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 M0R3E3 92 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 S100A10P60903 97 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 BAXQ07812 192 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 ERCC8Q13216 396 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 ESRGQ1W209 222 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 Q6ZTI0 123 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 ZNF503Q96F45 646 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 ODF3Q96PU9 254 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 PFDN5Q99471 154 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 SLC39A9Q9NUM3 307 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 NUDT15Q9NV35 164 aa11.18□□□□□ -0.62
HDAC8-202ENST00000373556 IGSF23A1L1A6 192 aa11.17□□□□□ -0.62
HDAC8-202ENST00000373556 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
HDAC8-202ENST00000373556 VWC2Q2TAL6 325 aa11.17□□□□□ -0.62
HDAC8-202ENST00000373556 C12orf45Q8N5I9 185 aaPredicted RBP11.17□□□□□ -0.62
HDAC8-202ENST00000373556 C2orf50Q96LR7 162 aa11.17□□□□□ -0.62
HDAC8-202ENST00000373556 PYGO2Q9BRQ0 406 aa11.17□□□□□ -0.62
HDAC8-202ENST00000373556 TRBV19A0A075B6N1 114 aa11.16□□□□□ -0.62
HDAC8-202ENST00000373556 PVALBP20472 110 aaPredicted RBP11.16□□□□□ -0.62
HDAC8-202ENST00000373556 RPL29P47914 159 aaKnown RBP11.16□□□□□ -0.62
HDAC8-202ENST00000373556 SULT1A1P50225 295 aa11.16□□□□□ -0.62
HDAC8-202ENST00000373556 SPATA12Q7Z6I5 190 aa11.16□□□□□ -0.62
HDAC8-202ENST00000373556 MAPKAPK5-AS1Q8N8E1 139 aa11.16□□□□□ -0.62
HDAC8-202ENST00000373556 Q9H3A6 140 aa11.16□□□□□ -0.62
HDAC8-202ENST00000373556 GSN-AS1Q9NRJ2 163 aa11.16□□□□□ -0.62
HDAC8-202ENST00000373556 LYRM2Q9NU23 88 aaPredicted RBP11.16□□□□□ -0.62
HDAC8-202ENST00000373556 C7orf71A4D174 169 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 ZNF253O75346 499 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 NDUFB4O95168 129 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 SLC25A5P05141 298 aaKnown RBP11.15□□□□□ -0.62
HDAC8-202ENST00000373556 PYYP10082 97 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 FGF7P21781 194 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 S100A11P31949 105 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 CD300CQ08708 224 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 DAZ2Q13117 558 aaKnown RBP11.15□□□□□ -0.62
HDAC8-202ENST00000373556 BTN1A1Q13410 526 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 RAB32Q13637 225 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 TTC32Q5I0X7 151 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 TMEM252Q8N6L7 170 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 C11orf72Q8NBR9 251 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 UPK3BQ9BT76 320 aa11.15□□□□□ -0.62
HDAC8-202ENST00000373556 MRPS16Q9Y3D3 137 aaKnown RBP11.15□□□□□ -0.62
HDAC8-202ENST00000373556 TRGV2A0A075B6R0 118 aa11.14□□□□□ -0.63
HDAC8-202ENST00000373556 H3BNG1 76 aa11.14□□□□□ -0.63
HDAC8-202ENST00000373556 GCSAMLQ5JQS6 135 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms