RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 VGLL1Q99990 258 aa18.51■□□□□ 0.55
CDK9-201ENST00000373264 IGHV1-24A0A0C4DH33 117 aa18.51■□□□□ 0.55
CDK9-201ENST00000373264 MCRIP2Q9BUT9 160 aaKnown RBP18.51■□□□□ 0.55
CDK9-201ENST00000373264 SOX21Q9Y651 276 aaPredicted RBP18.51■□□□□ 0.55
CDK9-201ENST00000373264 CLEC3BP05452 202 aa18.5■□□□□ 0.55
CDK9-201ENST00000373264 RHOGP84095 191 aa18.5■□□□□ 0.55
CDK9-201ENST00000373264 PRORYQ9H606 182 aa18.5■□□□□ 0.55
CDK9-201ENST00000373264 TP73-AS1Q9UF72 201 aa18.5■□□□□ 0.55
CDK9-201ENST00000373264 LINC00527Q9UJ94 153 aa18.5■□□□□ 0.55
CDK9-201ENST00000373264 IGHV3-49A0A0A0MS15 119 aa18.5■□□□□ 0.55
CDK9-201ENST00000373264 A0A1B0GUT8 65 aa18.5■□□□□ 0.55
CDK9-201ENST00000373264 FAM231BA6NCW3 169 aa18.5■□□□□ 0.55
CDK9-201ENST00000373264 TIMM8BQ9Y5J9 83 aaPredicted RBP18.5■□□□□ 0.55
CDK9-201ENST00000373264 ZNF80P51504 273 aaPredicted RBP18.49■□□□□ 0.55
CDK9-201ENST00000373264 RABAC1Q9UI14 185 aa18.49■□□□□ 0.55
CDK9-201ENST00000373264 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.48■□□□□ 0.55
CDK9-201ENST00000373264 TMEM213A2RRL7 107 aa18.48■□□□□ 0.55
CDK9-201ENST00000373264 SH2D1AO60880 128 aa18.48■□□□□ 0.55
CDK9-201ENST00000373264 IGHV4-39P01824 125 aa18.48■□□□□ 0.55
CDK9-201ENST00000373264 BTF3P20290 206 aaKnown RBP18.48■□□□□ 0.55
CDK9-201ENST00000373264 PDE6HQ13956 83 aa18.48■□□□□ 0.55
CDK9-201ENST00000373264 ZNF502Q8TBZ5 544 aa18.48■□□□□ 0.55
CDK9-201ENST00000373264 CENPVL3A0A0U1RRI6 287 aa18.47■□□□□ 0.55
CDK9-201ENST00000373264 ZNF207O43670 478 aaKnown RBP18.47■□□□□ 0.55
CDK9-201ENST00000373264 IGLC3P0DOY3 106 aa18.47■□□□□ 0.55
CDK9-201ENST00000373264 G0S2P27469 103 aa18.47■□□□□ 0.55
CDK9-201ENST00000373264 RNF182Q8N6D2 247 aa18.47■□□□□ 0.55
CDK9-201ENST00000373264 TCAPO15273 167 aa18.47■□□□□ 0.55
CDK9-201ENST00000373264 RELQ04864 619 aaPredicted RBP18.47■□□□□ 0.55
CDK9-201ENST00000373264 CLEC19AQ6UXS0 136 aa18.47■□□□□ 0.55
CDK9-201ENST00000373264 CCDC140Q96MF4 163 aa18.47■□□□□ 0.55
CDK9-201ENST00000373264 PRAC2D3DTV9 90 aa18.46■□□□□ 0.55
CDK9-201ENST00000373264 LINC00614P0C842 121 aa18.46■□□□□ 0.55
CDK9-201ENST00000373264 RPL7P18124 248 aaKnown RBP18.46■□□□□ 0.55
CDK9-201ENST00000373264 BRD3OSQ6XYD6 125 aa18.46■□□□□ 0.55
CDK9-201ENST00000373264 FAM110DQ8TAY7 271 aaPredicted RBP18.46■□□□□ 0.55
CDK9-201ENST00000373264 NPFFO15130 113 aa18.46■□□□□ 0.55
CDK9-201ENST00000373264 CSN1S1P47710 185 aa18.46■□□□□ 0.55
CDK9-201ENST00000373264 ERCC8Q13216 396 aa18.46■□□□□ 0.55
CDK9-201ENST00000373264 LYZL1Q6UWQ5 148 aa18.46■□□□□ 0.55
CDK9-201ENST00000373264 NDFIP1Q9BT67 221 aa18.46■□□□□ 0.55
CDK9-201ENST00000373264 CT45A10P0DMU9 189 aa18.45■□□□□ 0.54
CDK9-201ENST00000373264 ZFAND3Q9H8U3 227 aa18.45■□□□□ 0.54
CDK9-201ENST00000373264 TFPI2P48307 235 aa18.44■□□□□ 0.54
CDK9-201ENST00000373264 PRR25Q96S07 402 aa18.44■□□□□ 0.54
CDK9-201ENST00000373264 USP9XQ93008 2570 aaPredicted RBP18.44■□□□□ 0.54
CDK9-201ENST00000373264 IGSF10Q6WRI0 2623 aa18.44■□□□□ 0.54
CDK9-201ENST00000373264 H0Y8G0 127 aa18.44■□□□□ 0.54
CDK9-201ENST00000373264 PSG9Q00887 426 aa18.44■□□□□ 0.54
CDK9-201ENST00000373264 FAM106AQ4KMX7 169 aa18.44■□□□□ 0.54
CDK9-201ENST00000373264 ZNF575Q86XF7 245 aa18.43■□□□□ 0.54
CDK9-201ENST00000373264 CLPSL1A2RUU4 121 aa18.43■□□□□ 0.54
CDK9-201ENST00000373264 TMEM189A5PLL7 270 aa18.43■□□□□ 0.54
CDK9-201ENST00000373264 Q6ZN92 141 aa18.43■□□□□ 0.54
CDK9-201ENST00000373264 SERTM2A0A1B0GWG4 89 aa18.42■□□□□ 0.54
CDK9-201ENST00000373264 IGLL1P15814 213 aa18.42■□□□□ 0.54
CDK9-201ENST00000373264 RIGQ13278 110 aa18.42■□□□□ 0.54
CDK9-201ENST00000373264 TMEM70Q9BUB7 260 aa18.42■□□□□ 0.54
CDK9-201ENST00000373264 TXN2Q99757 166 aa18.42■□□□□ 0.54
CDK9-201ENST00000373264 LEPROTL1O95214 131 aa18.41■□□□□ 0.54
CDK9-201ENST00000373264 PMCHL2Q9BQD1 86 aa18.41■□□□□ 0.54
CDK9-201ENST00000373264 FAM162BQ5T6X4 162 aa18.41■□□□□ 0.54
CDK9-201ENST00000373264 AMN1Q8IY45 258 aa18.41■□□□□ 0.54
CDK9-201ENST00000373264 CHCHD1Q96BP2 118 aaKnown RBP18.41■□□□□ 0.54
CDK9-201ENST00000373264 IGHV4-61A0A0C4DH41 118 aa18.4■□□□□ 0.54
CDK9-201ENST00000373264 BUB3O43684 328 aa18.4■□□□□ 0.54
CDK9-201ENST00000373264 S100A7AQ86SG5 101 aa18.4■□□□□ 0.54
CDK9-201ENST00000373264 C5orf56Q8N8D9 126 aa18.4■□□□□ 0.54
CDK9-201ENST00000373264 UQCR10Q9UDW1 63 aa18.4■□□□□ 0.54
CDK9-201ENST00000373264 LOXL1Q08397 574 aaPredicted RBP18.39■□□□□ 0.53
CDK9-201ENST00000373264 LOC389332A0A1B0GUA5 103 aa18.39■□□□□ 0.53
CDK9-201ENST00000373264 SYS1-DBNDD2H3BUS1 97 aa18.39■□□□□ 0.53
CDK9-201ENST00000373264 FXYD7P58549 80 aa18.39■□□□□ 0.53
CDK9-201ENST00000373264 TRAV9-2A0A087WT02 112 aa18.38■□□□□ 0.53
CDK9-201ENST00000373264 hDV102S1A0JD36 115 aa18.38■□□□□ 0.53
CDK9-201ENST00000373264 TRAV40A0A0B4J280 105 aa18.38■□□□□ 0.53
CDK9-201ENST00000373264 OR4C46A6NHA9 309 aa18.38■□□□□ 0.53
CDK9-201ENST00000373264 D6R8Y8 96 aa18.38■□□□□ 0.53
CDK9-201ENST00000373264 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.38■□□□□ 0.53
CDK9-201ENST00000373264 PIFOQ8TCI5 191 aa18.38■□□□□ 0.53
CDK9-201ENST00000373264 MSRB1Q9NZV6 116 aa18.38■□□□□ 0.53
CDK9-201ENST00000373264 SMKR1H3BMG3 65 aa18.37■□□□□ 0.53
CDK9-201ENST00000373264 RPLP1P05386 114 aaKnown RBP18.37■□□□□ 0.53
CDK9-201ENST00000373264 ZNF25P17030 456 aaPredicted RBP18.37■□□□□ 0.53
CDK9-201ENST00000373264 IFI27P40305 119 aaPredicted RBP18.37■□□□□ 0.53
CDK9-201ENST00000373264 HNRNPA3P51991 378 aaKnown RBP18.37■□□□□ 0.53
CDK9-201ENST00000373264 PPIFP30405 207 aaKnown RBP18.36■□□□□ 0.53
CDK9-201ENST00000373264 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.36■□□□□ 0.534e-7■■■□□ 19.1
CDK9-201ENST00000373264 Q6ZQT7 251 aa18.35■□□□□ 0.53
CDK9-201ENST00000373264 STPG4Q8N801 248 aa18.35■□□□□ 0.53
CDK9-201ENST00000373264 CACNA1AO00555 2505 aa18.35■□□□□ 0.53
CDK9-201ENST00000373264 IGHV4-38-2P0DP08 117 aa18.35■□□□□ 0.53
CDK9-201ENST00000373264 IL17RELQ6ZVW7 336 aa18.35■□□□□ 0.53
CDK9-201ENST00000373264 M0QZK8 103 aa18.34■□□□□ 0.53
CDK9-201ENST00000373264 LY6EQ16553 131 aa18.34■□□□□ 0.53
CDK9-201ENST00000373264 SAPCD1Q5SSQ6 148 aa18.34■□□□□ 0.53
CDK9-201ENST00000373264 GATD1Q8NB37 220 aa18.34■□□□□ 0.53
CDK9-201ENST00000373264 SCGB2A1O75556 95 aa18.34■□□□□ 0.53
CDK9-201ENST00000373264 TSPOP30536 169 aa18.34■□□□□ 0.53
CDK9-201ENST00000373264 CRXO43186 299 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms