RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 FBXL15Q9H469 300 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 UBTD1Q9HAC8 227 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 BOD1L1Q8NFC6 3051 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 TRAV4A0A0B4J268 109 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 GGTLC3B5MD39 225 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 CHEK1O14757 476 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 NDUFS7O75251 213 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 FAM106CPP0CH98 169 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 CACNG7P62955 275 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 FAM106AQ4KMX7 169 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 SPRNQ5BIV9 151 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 PPP1R27Q86WC6 154 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 RPRMLQ8N4K4 120 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 RASL11BQ9BPW5 248 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 TPSG1Q9NRR2 321 aa7.04□□□□□ -1.28
ATG4A-203ENST00000372232 CGB1A6NKQ9 187 aa7.03□□□□□ -1.28
ATG4A-203ENST00000372232 F8WDY8 70 aa7.03□□□□□ -1.28
ATG4A-203ENST00000372232 LTAP01374 205 aa7.03□□□□□ -1.28
ATG4A-203ENST00000372232 LINC00694P0DN24 101 aa7.03□□□□□ -1.28
ATG4A-203ENST00000372232 RPL7P18124 248 aaKnown RBP7.03□□□□□ -1.28
ATG4A-203ENST00000372232 SBSPONQ8IVN8 264 aa7.03□□□□□ -1.28
ATG4A-203ENST00000372232 OR10J6PQ8NGY7 276 aa7.03□□□□□ -1.28
ATG4A-203ENST00000372232 CACNA1GO43497 2377 aa7.03□□□□□ -1.28
ATG4A-203ENST00000372232 TRBV25-1A0A075B6N4 114 aa7.02□□□□□ -1.28
ATG4A-203ENST00000372232 A0A096LNJ9 63 aa7.02□□□□□ -1.28
ATG4A-203ENST00000372232 A0A1W2PPI3 338 aa7.02□□□□□ -1.28
ATG4A-203ENST00000372232 APOHP02749 345 aaPredicted RBP7.02□□□□□ -1.28
ATG4A-203ENST00000372232 HLA-DRB4P13762 266 aa7.02□□□□□ -1.28
ATG4A-203ENST00000372232 KIR2DS2P43631 304 aa7.02□□□□□ -1.28
ATG4A-203ENST00000372232 C11orf53Q8IXP5 236 aa7.02□□□□□ -1.28
ATG4A-203ENST00000372232 ZNF808Q8N4W9 903 aaPredicted RBP7.02□□□□□ -1.28
ATG4A-203ENST00000372232 OR8A1Q8NGG7 326 aa7.02□□□□□ -1.28
ATG4A-203ENST00000372232 LSM4Q9Y4Z0 139 aaKnown RBP7.02□□□□□ -1.28
ATG4A-203ENST00000372232 TIMM8BQ9Y5J9 83 aaPredicted RBP7.02□□□□□ -1.28
ATG4A-203ENST00000372232 HLA-DRB4X5D2U9 266 aa7.02□□□□□ -1.28
ATG4A-203ENST00000372232 ESPL1Q14674 2120 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 A0A1B0GX51 115 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 SHISA9B4DS77 424 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 PRSS46E5RG02 174 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 J3KT08 172 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 IGLV1-44P01699 117 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 CECR9P0C854 216 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 ADORA2A-AS1P86434 159 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 FAM19A5Q7Z5A7 132 aaPredicted RBP7.02□□□□□ -1.29
ATG4A-203ENST00000372232 TMEM158Q8WZ71 300 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 COQ2Q96H96 371 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 RITA1Q96K30 269 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 ZNF71Q9NQZ8 489 aaPredicted RBP7.02□□□□□ -1.29
ATG4A-203ENST00000372232 KLF12Q9Y4X4 402 aa7.02□□□□□ -1.29
ATG4A-203ENST00000372232 RNASE1P07998 156 aaKnown RBP7.01□□□□□ -1.29
ATG4A-203ENST00000372232 ASPHD1Q5U4P2 390 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 ZNF826PQ6ZT77 177 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 MIR17HGQ75NE6 70 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 RND1Q92730 232 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 ZNF414Q96IQ9 312 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 DUX5Q96PT3 197 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 FAM234AQ9H0X4 552 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 CXXC4Q9H2H0 198 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 WNT9BO14905 357 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 CRLF1O75462 422 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 PLA2G1BP04054 148 aaKnown RBP7.01□□□□□ -1.29
ATG4A-203ENST00000372232 OR1L8Q8NGR8 309 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 OR13C6PQ8NH95 151 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 UBALD1Q8TB05 177 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 ZNF503Q96F45 646 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 PRR25Q96S07 402 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 FZR1Q9UM11 496 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 PROCRQ9UNN8 238 aa7.01□□□□□ -1.29
ATG4A-203ENST00000372232 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 IGHV1-18A0A0C4DH31 117 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 LOC107984640A0A0U1RRK4 108 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 F5H768 121 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 TIMM8AO60220 97 aaPredicted RBP7□□□□□ -1.29
ATG4A-203ENST00000372232 HOXA4Q00056 320 aaPredicted RBP7□□□□□ -1.29
ATG4A-203ENST00000372232 MORN3Q6PF18 240 aaPredicted RBP7□□□□□ -1.29
ATG4A-203ENST00000372232 IGFL3Q6UXB1 125 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 DRAM1Q8N682 238 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 SSMEM1Q8WWF3 244 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 CACNA1AO00555 2505 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 SPTBN2O15020 2390 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 TMEM30CPA0ZSE6 113 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 C9JAW5 83 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 K7EMI3 77 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 ZNF474Q6S9Z5 364 aaPredicted RBP7□□□□□ -1.29
ATG4A-203ENST00000372232 MOB3BQ86TA1 216 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 FAM110DQ8TAY7 271 aaPredicted RBP7□□□□□ -1.29
ATG4A-203ENST00000372232 MRAPQ8TCY5 172 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 TMEM101Q96IK0 257 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 GFRA4Q9GZZ7 299 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 RPP21Q9H633 154 aaKnown RBP7□□□□□ -1.29
ATG4A-203ENST00000372232 ENY2Q9NPA8 101 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 HIGD1AQ9Y241 93 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 PRR14LQ5THK1 2151 aa7□□□□□ -1.29
ATG4A-203ENST00000372232 ELANEP08246 267 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 COL8A2P25067 703 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 PLEKHA3Q9HB20 300 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 C21orf62Q9NYP8 219 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 SLC25A15Q9Y619 301 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 C12orf77C9JDV5 145 aa6.99□□□□□ -1.29
ATG4A-203ENST00000372232 ZNF137PP52743 207 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms