RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 GNB4Q9HAV0 340 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 SLC39A9Q9NUM3 307 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 ATRQ13535 2644 aa2.71□□□□□ -1.98
MCF2-202ENST00000370573 FBN1P35555 2871 aaKnown RBP2.71□□□□□ -1.98
MCF2-202ENST00000370573 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.7□□□□□ -1.98
MCF2-202ENST00000370573 TRBV7-1A0A0A6YYK4 115 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 IGHV3-35A0A0C4DH35 117 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 PPP5D1E7EU14 171 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 C17orf112F2Z3M2 114 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 GNG7O60262 68 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 APOC3P02656 99 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 APOHP02749 345 aaPredicted RBP2.7□□□□□ -1.98
MCF2-202ENST00000370573 RD3LP0DJH9 198 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 PSG1P11464 419 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 GPR183P32249 361 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 KRTAP10-3P60369 221 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 YPEL3P61236 119 aaPredicted RBP2.7□□□□□ -1.98
MCF2-202ENST00000370573 SLC35B1P78383 322 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 CCL20P78556 96 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 SERF2P84101 59 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 RAB31Q13636 194 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 SPATA31B1PQ5VZV4 182 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 EIF5AL1Q6IS14 154 aaKnown RBP2.7□□□□□ -1.98
MCF2-202ENST00000370573 ZNF343Q6P1L6 599 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 SMIM15Q7Z3B0 74 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 ZNF709Q8N972 641 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 OR5AU1Q8NGC0 362 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 OR4X2Q8NGF9 303 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 OR10G4Q8NGN3 311 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 OR10G9Q8NGN4 311 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 OR10G7Q8NGN6 311 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 FAM213BQ8TBF2 198 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 TMEM37Q8WXS4 190 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 OR5B12Q96R08 314 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 DOK5Q9P104 306 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 TRAV30A0A087WSZ9 112 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 A0A0G2JLM5 398 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 A0A1B0GV90 55 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 WI2-2373I1.2A0A1W2PRP0 233 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 ZNF705EA8MWA4 302 aaPredicted RBP2.7□□□□□ -1.98
MCF2-202ENST00000370573 SEC14L6B5MCN3 397 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 UMAD1C9J7I0 102 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 BMPR1BO00238 502 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 TGOLN2O43493 480 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 SAP30O75446 220 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 TOMM40O96008 361 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 MT-ND4LP03901 98 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 IGHV4-30-4P0DP06 118 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 CD28P10747 220 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 DDTP30046 118 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 PLP1P60201 277 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 ZNF616Q08AN1 781 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 LINC01620Q4KN68 170 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 AKR1C8PQ5T2L2 129 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 MORN5Q5VZ52 161 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 SPSB3Q6PJ21 355 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 Q6ZRG5 221 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.7□□□□□ -1.98
MCF2-202ENST00000370573 OR51G1Q8NGK1 321 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 PHLDA1Q8WV24 401 aaPredicted RBP2.7□□□□□ -1.98
MCF2-202ENST00000370573 MBD3L1Q8WWY6 194 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 SEC11CQ9BY50 192 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 SMCO4Q9NRQ5 59 aa2.7□□□□□ -1.98
MCF2-202ENST00000370573 MRPL27Q9P0M9 148 aaKnown RBP2.7□□□□□ -1.98
MCF2-202ENST00000370573 IGHV3OR16-8A0A075B7F1 116 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 TRAV5A0A0B4J249 113 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 CLPSL1A2RUU4 121 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 HMGB3O15347 200 aaKnown RBP2.69□□□□□ -1.98
MCF2-202ENST00000370573 S100A2P29034 98 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 AMTP48728 403 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 CEBPGP53567 150 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 SELENOTP62341 195 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 PEA15Q15121 130 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 ACOT6Q3I5F7 207 aaPredicted RBP2.69□□□□□ -1.98
MCF2-202ENST00000370573 C10orf25Q5T742 122 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 LCN15Q6UWW0 184 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 TOMM20LQ6UXN7 152 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 DPPA3Q6W0C5 159 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 MIR17HGQ75NE6 70 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 COMMD1Q8N668 190 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 LYPD6BQ8NI32 183 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 RPL36ALQ969Q0 106 aaKnown RBP2.69□□□□□ -1.98
MCF2-202ENST00000370573 UBE2E2Q96LR5 201 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 UHRF2Q96PU4 802 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 SLC25A22Q9H936 323 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 PEF1Q9UBV8 284 aaKnown RBP2.69□□□□□ -1.98
MCF2-202ENST00000370573 PUS1Q9Y606 427 aaKnown RBP eCLIP2.69□□□□□ -1.98
MCF2-202ENST00000370573 IGHV4OR15-8A0A075B7B6 117 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 A0A087WW49 117 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 A0A1B0GV50 99 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 FAM74A7A6NL05 159 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 COX7A2P2O60397 106 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 HYPMO75409 117 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 LGALS1P09382 135 aaKnown RBP2.69□□□□□ -1.98
MCF2-202ENST00000370573 OR5G3P0C626 314 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 ORM2P19652 201 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 CDKN1BP46527 198 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 PPT1P50897 306 aa2.69□□□□□ -1.98
MCF2-202ENST00000370573 FGF8P55075 233 aaPredicted RBP2.69□□□□□ -1.98
MCF2-202ENST00000370573 KRTAP10-11P60412 298 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms