RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 NDUFS8O00217 210 aa11.38□□□□□ -0.59
PHTF1-204ENST00000369604 ZNF493Q6ZR52 646 aa11.38□□□□□ -0.59
PHTF1-204ENST00000369604 WFDC12Q8WWY7 111 aa11.38□□□□□ -0.59
PHTF1-204ENST00000369604 CNTFRP26992 372 aa11.38□□□□□ -0.59
PHTF1-204ENST00000369604 FOXC2Q99958 501 aa11.38□□□□□ -0.59
PHTF1-204ENST00000369604 SPANXB1Q9NS25 103 aaPredicted RBP11.38□□□□□ -0.59
PHTF1-204ENST00000369604 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
PHTF1-204ENST00000369604 TRBV25-1A0A075B6N4 114 aa11.38□□□□□ -0.59
PHTF1-204ENST00000369604 CEACAM3P40198 252 aa11.38□□□□□ -0.59
PHTF1-204ENST00000369604 PRB3Q04118 309 aaPredicted RBP11.38□□□□□ -0.59
PHTF1-204ENST00000369604 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
PHTF1-204ENST00000369604 F8W1H4 67 aa11.37□□□□□ -0.59
PHTF1-204ENST00000369604 ZC2HC1BQ5TFG8 222 aa11.37□□□□□ -0.59
PHTF1-204ENST00000369604 SPAG8Q99932 426 aaPredicted RBP11.37□□□□□ -0.59
PHTF1-204ENST00000369604 MAP1LC3AQ9H492 121 aa11.37□□□□□ -0.59
PHTF1-204ENST00000369604 TMEM14CQ9P0S9 112 aa11.37□□□□□ -0.59
PHTF1-204ENST00000369604 SPAARA0A1B0GVQ0 90 aa11.37□□□□□ -0.59
PHTF1-204ENST00000369604 SH2D1AO60880 128 aa11.37□□□□□ -0.59
PHTF1-204ENST00000369604 IGKCP01834 107 aa11.37□□□□□ -0.59
PHTF1-204ENST00000369604 SCGB2A2Q13296 93 aa11.37□□□□□ -0.59
PHTF1-204ENST00000369604 PLGLAQ15195 96 aa11.37□□□□□ -0.59
PHTF1-204ENST00000369604 GATD1Q8NB37 220 aa11.37□□□□□ -0.59
PHTF1-204ENST00000369604 EVI2AP22794 236 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 MC5RP33032 325 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 GATA4P43694 442 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 CEND1Q8N111 149 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 AAMDCQ9H7C9 122 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 APC2O95996 2303 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 ATP5G2Q06055 141 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 FOXI2Q6ZQN5 318 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 ANKRD11Q6UB99 2663 aaPredicted RBP11.36□□□□□ -0.59
PHTF1-204ENST00000369604 IGLL5B9A064 214 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 SIGLEC15Q6ZMC9 328 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 S4R3C0 116 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 U3KQK5 164 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 MAP1AP78559 2803 aaPredicted RBP11.36□□□□□ -0.59
PHTF1-204ENST00000369604 OTOGLQ3ZCN5 2332 aa11.36□□□□□ -0.59
PHTF1-204ENST00000369604 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
PHTF1-204ENST00000369604 GAGE13Q4V321 117 aa11.35□□□□□ -0.59
PHTF1-204ENST00000369604 WNK2Q9Y3S1 2297 aa11.35□□□□□ -0.59
PHTF1-204ENST00000369604 A0A1B0GWB2 263 aa11.35□□□□□ -0.59
PHTF1-204ENST00000369604 WI2-2373I1.2A0A1W2PRP0 233 aa11.35□□□□□ -0.59
PHTF1-204ENST00000369604 IL4P05112 153 aa11.35□□□□□ -0.59
PHTF1-204ENST00000369604 HOXB4P17483 251 aaPredicted RBP11.35□□□□□ -0.59
PHTF1-204ENST00000369604 HIST1H4GQ99525 98 aa11.35□□□□□ -0.59
PHTF1-204ENST00000369604 HIGD1BQ9P298 99 aa11.35□□□□□ -0.59
PHTF1-204ENST00000369604 RAI1Q7Z5J4 1906 aaPredicted RBP11.35□□□□□ -0.59
PHTF1-204ENST00000369604 ODF1Q14990 250 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 ZNF562Q6V9R5 426 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 CCL17Q92583 94 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 ZZEF1O43149 2961 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 IGHG3P01860 377 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 DLX1P56177 255 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 SRSF6Q13247 344 aaKnown RBP11.34□□□□□ -0.59
PHTF1-204ENST00000369604 SVIPQ8NHG7 77 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 SMPXQ9UHP9 88 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 IGLV3-9A0A075B6K5 115 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 TRBV6-1A0A0K0K1D8 114 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 TMEM8BA6NDV4 472 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 NPIPB5A8MRT5 1133 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 NDUFB3O43676 98 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 DPM2O94777 84 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 CNIH1O95406 144 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 ORM1P02763 201 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 INSL3P51460 131 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 LCNL1Q6ZST4 164 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 SHANK2-AS3Q9BTD1 123 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 MSRB1Q9NZV6 116 aa11.34□□□□□ -0.59
PHTF1-204ENST00000369604 AGRNO00468 2067 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 TRAV26-1A0A087WT03 109 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 IGKV2-40A0A087WW87 121 aaPredicted RBP11.33□□□□□ -0.6
PHTF1-204ENST00000369604 E9PLD3 99 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 IGKV2D-40P01614 121 aaPredicted RBP11.33□□□□□ -0.6
PHTF1-204ENST00000369604 FBXL15Q9H469 300 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 DKK4Q9UBT3 224 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 HHLA3Q9XRX5 114 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 TRAV40A0A0B4J280 105 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 PPIFP30405 207 aaKnown RBP11.33□□□□□ -0.6
PHTF1-204ENST00000369604 PHLDA1Q8WV24 401 aaPredicted RBP11.33□□□□□ -0.6
PHTF1-204ENST00000369604 AKAP6Q13023 2319 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 IGKV1-17P01599 117 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 C12orf74Q32Q52 190 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 KLF17Q5JT82 389 aaPredicted RBP11.33□□□□□ -0.6
PHTF1-204ENST00000369604 TTC9CQ8N5M4 171 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 Q8TAT8 98 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 SH3BGRL2Q9UJC5 107 aa11.33□□□□□ -0.6
PHTF1-204ENST00000369604 MUC6Q6W4X9 2439 aa11.32□□□□□ -0.6
PHTF1-204ENST00000369604 GAS8-AS1O95177 125 aa11.32□□□□□ -0.6
PHTF1-204ENST00000369604 TMEM158Q8WZ71 300 aa11.32□□□□□ -0.6
PHTF1-204ENST00000369604 SIGLEC9Q9Y336 463 aa11.32□□□□□ -0.6
PHTF1-204ENST00000369604 EGR2P11161 476 aaPredicted RBP11.32□□□□□ -0.6
PHTF1-204ENST00000369604 MRGPRG-AS1Q2M3A8 158 aa11.32□□□□□ -0.6
PHTF1-204ENST00000369604 FAM169BQ8N8A8 192 aa11.32□□□□□ -0.6
PHTF1-204ENST00000369604 PAX8Q06710 450 aa11.31□□□□□ -0.6
PHTF1-204ENST00000369604 LYPD2Q6UXB3 125 aa11.31□□□□□ -0.6
PHTF1-204ENST00000369604 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
PHTF1-204ENST00000369604 FDCSPQ8NFU4 85 aa11.31□□□□□ -0.6
PHTF1-204ENST00000369604 RNF125Q96EQ8 232 aa11.31□□□□□ -0.6
PHTF1-204ENST00000369604 SPATA25Q9BR10 227 aa11.31□□□□□ -0.6
PHTF1-204ENST00000369604 TM2D2Q9BX73 214 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms