RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
PHGDH-202ENST00000369409 TMEM75Q8N9X5 138 aa12.78□□□□□ -0.36
PHGDH-202ENST00000369409 A8MWP6 167 aa12.78□□□□□ -0.36
PHGDH-202ENST00000369409 LTAP01374 205 aa12.78□□□□□ -0.36
PHGDH-202ENST00000369409 IGLV2-11P01706 119 aa12.78□□□□□ -0.36
PHGDH-202ENST00000369409 SLURP1P55000 103 aa12.78□□□□□ -0.36
PHGDH-202ENST00000369409 CTAG1AP78358 180 aa12.78□□□□□ -0.36
PHGDH-202ENST00000369409 SRSF2Q01130 221 aaKnown RBP12.78□□□□□ -0.36
PHGDH-202ENST00000369409 ELOBQ15370 118 aa12.78□□□□□ -0.36
PHGDH-202ENST00000369409 IGKV2-40A0A087WW87 121 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-202ENST00000369409 ZNF705FA8MVS1 300 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-202ENST00000369409 HAX1O00165 279 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 PPP1R2P9O14990 202 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 TCF21O43680 179 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 NDUFA7O95182 113 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 GCGP01275 180 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 IGKV2D-40P01614 121 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-202ENST00000369409 CD28P10747 220 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 ERVFC1-1P60608 527 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 PSG3Q16557 428 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 PRNTQ86SH4 94 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 C1QL4Q86Z23 238 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 OR11H1Q8NG94 326 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 OR10G8Q8NGN5 311 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 DUX3Q96PT4 197 aa12.77□□□□□ -0.37
PHGDH-202ENST00000369409 SETXQ7Z333 2677 aaKnown RBP12.77□□□□□ -0.37
PHGDH-202ENST00000369409 TRAV8-2A0A0B4J237 113 aa12.76□□□□□ -0.37
PHGDH-202ENST00000369409 LINC01619G3V211 115 aa12.76□□□□□ -0.37
PHGDH-202ENST00000369409 LGALS9O00182 355 aa12.76□□□□□ -0.37
PHGDH-202ENST00000369409 RPL11P62913 178 aaKnown RBP12.76□□□□□ -0.37
PHGDH-202ENST00000369409 FLI1Q01543 452 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-202ENST00000369409 RNASE7Q9H1E1 156 aaKnown RBP12.76□□□□□ -0.37
PHGDH-202ENST00000369409 PRR27Q6MZM9 219 aa12.76□□□□□ -0.37
PHGDH-202ENST00000369409 DPF1Q92782 380 aa12.76□□□□□ -0.37
PHGDH-202ENST00000369409 SMIM12Q96EX1 92 aa12.76□□□□□ -0.37
PHGDH-202ENST00000369409 C16orf92Q96LL3 132 aa12.76□□□□□ -0.37
PHGDH-202ENST00000369409 ASCL2Q99929 193 aa12.76□□□□□ -0.37
PHGDH-202ENST00000369409 SETD2Q9BYW2 2564 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-202ENST00000369409 IGKV3-7A0A075B6H7 116 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 TGIF2-C20orf24A0A0A6YYL0 155 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 SERTM2A0A1B0GWG4 89 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 A0A1W2PRX2 142 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 CRLF1O75462 422 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 CXCL1P09341 107 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 LCN12Q6JVE5 192 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 ARL6IP6Q8N6S5 226 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 OR1N2Q8NGR9 330 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 MLST8Q9BVC4 326 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 PSG8Q9UQ74 426 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 F8P00451 2351 aa12.75□□□□□ -0.37
PHGDH-202ENST00000369409 TRBV6-1A0A0K0K1D8 114 aa12.74□□□□□ -0.37
PHGDH-202ENST00000369409 BMI1P35226 326 aa12.74□□□□□ -0.37
PHGDH-202ENST00000369409 KLF5Q13887 457 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-202ENST00000369409 IBA57Q5T440 356 aaKnown RBP12.74□□□□□ -0.37
PHGDH-202ENST00000369409 TCF24Q7RTU0 167 aa12.74□□□□□ -0.37
PHGDH-202ENST00000369409 NRN1Q9NPD7 142 aa12.74□□□□□ -0.37
PHGDH-202ENST00000369409 RNF114Q9Y508 228 aa12.74□□□□□ -0.37
PHGDH-202ENST00000369409 S100PP25815 95 aa12.74□□□□□ -0.37
PHGDH-202ENST00000369409 CITED2Q99967 270 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-202ENST00000369409 OSTCQ9NRP0 149 aa12.74□□□□□ -0.37
PHGDH-202ENST00000369409 V9GYV3 84 aa12.74□□□□□ -0.37
PHGDH-202ENST00000369409 C2orf70A6NJV1 201 aa12.73□□□□□ -0.37
PHGDH-202ENST00000369409 PRAC2D3DTV9 90 aa12.73□□□□□ -0.37
PHGDH-202ENST00000369409 SOCS3O14543 225 aa12.73□□□□□ -0.37
PHGDH-202ENST00000369409 PFN1P07737 140 aaKnown RBP12.73□□□□□ -0.37
PHGDH-202ENST00000369409 WFDC12Q8WWY7 111 aa12.73□□□□□ -0.37
PHGDH-202ENST00000369409 RAB5AP20339 215 aa12.72□□□□□ -0.37
PHGDH-202ENST00000369409 TMEM183AQ8IXX5 376 aa12.72□□□□□ -0.37
PHGDH-202ENST00000369409 VGLL1Q99990 258 aa12.72□□□□□ -0.37
PHGDH-202ENST00000369409 A0A1W2PPQ1 181 aa12.72□□□□□ -0.37
PHGDH-202ENST00000369409 PROK1P58294 105 aa12.72□□□□□ -0.37
PHGDH-202ENST00000369409 KCNIP4Q6PIL6 250 aa12.72□□□□□ -0.37
PHGDH-202ENST00000369409 Q8TAT8 98 aa12.72□□□□□ -0.37
PHGDH-202ENST00000369409 MRPL53Q96EL3 112 aaKnown RBP12.72□□□□□ -0.37
PHGDH-202ENST00000369409 C20orf173Q96LM9 149 aa12.72□□□□□ -0.37
PHGDH-202ENST00000369409 TSSC4Q9Y5U2 329 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-202ENST00000369409 CBLN1P23435 193 aa12.71□□□□□ -0.37
PHGDH-202ENST00000369409 RAX2Q96IS3 184 aa12.71□□□□□ -0.37
PHGDH-202ENST00000369409 ZFP30Q9Y2G7 519 aa12.71□□□□□ -0.37
PHGDH-202ENST00000369409 ZNF705GA8MUZ8 300 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-202ENST00000369409 FOLR2P14207 255 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 FAM3BP58499 235 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-202ENST00000369409 LINC00322Q6ZN03 302 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-202ENST00000369409 FAM231DQ6ZW35 169 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 GBGT1Q8N5D6 347 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 ZNF738Q8NE65 137 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 ZC2HC1AQ96GY0 325 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 FAM210BQ96KR6 192 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 CLEC5AQ9NY25 188 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 IL36BQ9NZH7 164 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 TRBV24-1A0A075B6N3 115 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 ERCC8Q13216 396 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 NUDT10Q8NFP7 164 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 DLX4Q92988 240 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-202ENST00000369409 NUDT11Q96G61 164 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 IMMP2LQ96T52 175 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 BIN3Q9NQY0 253 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 ZNF492Q9P255 531 aa12.7□□□□□ -0.38
PHGDH-202ENST00000369409 ZMAT5Q9UDW3 170 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms