RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TRAV34A0A0B4J273 112 aa18.07■□□□□ 0.48
SNX3-203ENST00000368979 PGPEP1LA6NFU8 196 aa18.07■□□□□ 0.48
SNX3-203ENST00000368979 ISLRO14498 428 aa18.07■□□□□ 0.48
SNX3-203ENST00000368979 FOLR2P14207 255 aa18.07■□□□□ 0.48
SNX3-203ENST00000368979 NDUFA11Q86Y39 141 aa18.07■□□□□ 0.48
SNX3-203ENST00000368979 S100A9P06702 114 aaKnown RBP18.06■□□□□ 0.48
SNX3-203ENST00000368979 CSN1S1P47710 185 aa18.06■□□□□ 0.48
SNX3-203ENST00000368979 GNG4P50150 75 aa18.06■□□□□ 0.48
SNX3-203ENST00000368979 GOLT1AQ6ZVE7 132 aa18.06■□□□□ 0.48
SNX3-203ENST00000368979 FMC1Q96HJ9 113 aa18.06■□□□□ 0.48
SNX3-203ENST00000368979 PRELID1Q9Y255 219 aa18.06■□□□□ 0.48
SNX3-203ENST00000368979 B4DEV8 164 aa18.05■□□□□ 0.48
SNX3-203ENST00000368979 UBE2G1P62253 170 aa18.05■□□□□ 0.48
SNX3-203ENST00000368979 OCC1Q8TAD7 63 aa18.05■□□□□ 0.48
SNX3-203ENST00000368979 RPS10P5Q9NQ39 176 aa18.05■□□□□ 0.48
SNX3-203ENST00000368979 CLEC5AQ9NY25 188 aa18.05■□□□□ 0.48
SNX3-203ENST00000368979 MLXQ9UH92 298 aa18.05■□□□□ 0.48
SNX3-203ENST00000368979 SERTM2A0A1B0GWG4 89 aa18.04■□□□□ 0.48
SNX3-203ENST00000368979 M0QZ24 198 aa18.04■□□□□ 0.48
SNX3-203ENST00000368979 IGLV2-11P01706 119 aa18.04■□□□□ 0.48
SNX3-203ENST00000368979 RPL11P62913 178 aaKnown RBP18.04■□□□□ 0.48
SNX3-203ENST00000368979 RNF182Q8N6D2 247 aa18.04■□□□□ 0.48
SNX3-203ENST00000368979 TMEM75Q8N9X5 138 aa18.04■□□□□ 0.48
SNX3-203ENST00000368979 MRPL53Q96EL3 112 aaKnown RBP18.04■□□□□ 0.48
SNX3-203ENST00000368979 C16orf92Q96LL3 132 aa18.04■□□□□ 0.48
SNX3-203ENST00000368979 SELENOKQ9Y6D0 94 aa18.04■□□□□ 0.48
SNX3-203ENST00000368979 IGLV2-8P01709 118 aa18.03■□□□□ 0.48
SNX3-203ENST00000368979 CSN3P07498 182 aa18.03■□□□□ 0.48
SNX3-203ENST00000368979 NSUN5P1Q3KNT7 163 aa18.03■□□□□ 0.48
SNX3-203ENST00000368979 AURKAIP1Q9NWT8 199 aaPredicted RBP18.03■□□□□ 0.48
SNX3-203ENST00000368979 TRBV6-1A0A0K0K1D8 114 aa18.03■□□□□ 0.48
SNX3-203ENST00000368979 K7EQM0 130 aa18.03■□□□□ 0.48
SNX3-203ENST00000368979 LCN12Q6JVE5 192 aa18.03■□□□□ 0.48
SNX3-203ENST00000368979 ISOC2Q96AB3 205 aa18.03■□□□□ 0.48
SNX3-203ENST00000368979 SGK494Q96LW2 274 aa18.03■□□□□ 0.48
SNX3-203ENST00000368979 A0A087WWC5 75 aa18.02■□□□□ 0.47
SNX3-203ENST00000368979 TRAV8-1A0A0A6YYK1 113 aa18.02■□□□□ 0.47
SNX3-203ENST00000368979 ZNF705FA8MVS1 300 aaPredicted RBP18.02■□□□□ 0.47
SNX3-203ENST00000368979 K7EN84 100 aa18.02■□□□□ 0.47
SNX3-203ENST00000368979 Q86TA4 180 aa18.02■□□□□ 0.47
SNX3-203ENST00000368979 IGKV3-7A0A075B6H7 116 aa18.01■□□□□ 0.47
SNX3-203ENST00000368979 LTAP01374 205 aa18.01■□□□□ 0.47
SNX3-203ENST00000368979 PRB4P10163 310 aaPredicted RBP18.01■□□□□ 0.47
SNX3-203ENST00000368979 PSG3Q16557 428 aa18.01■□□□□ 0.47
SNX3-203ENST00000368979 BAGE2Q86Y30 109 aa18.01■□□□□ 0.47
SNX3-203ENST00000368979 DCANP1Q8TF63 244 aa18.01■□□□□ 0.47
SNX3-203ENST00000368979 OVOL1O14753 267 aa18■□□□□ 0.47
SNX3-203ENST00000368979 TSPAN4O14817 238 aa18■□□□□ 0.47
SNX3-203ENST00000368979 SAMD13Q5VXD3 122 aa18■□□□□ 0.47
SNX3-203ENST00000368979 SMIM12Q96EX1 92 aa18■□□□□ 0.47
SNX3-203ENST00000368979 C20orf173Q96LM9 149 aa18■□□□□ 0.47
SNX3-203ENST00000368979 IGKV2-40A0A087WW87 121 aaPredicted RBP17.99■□□□□ 0.47
SNX3-203ENST00000368979 DNASE2O00115 360 aaPredicted RBP17.99■□□□□ 0.47
SNX3-203ENST00000368979 IGKV2D-40P01614 121 aaPredicted RBP17.99■□□□□ 0.47
SNX3-203ENST00000368979 FLI1Q01543 452 aaPredicted RBP17.99■□□□□ 0.47
SNX3-203ENST00000368979 BTN1A1Q13410 526 aa17.99■□□□□ 0.47
SNX3-203ENST00000368979 RNF212Q495C1 297 aa17.99■□□□□ 0.47
SNX3-203ENST00000368979 MS4A6AQ9H2W1 248 aa17.99■□□□□ 0.47
SNX3-203ENST00000368979 PRAC2D3DTV9 90 aa17.98■□□□□ 0.47
SNX3-203ENST00000368979 CBLN2Q8IUK8 224 aa17.98■□□□□ 0.47
SNX3-203ENST00000368979 MLST8Q9BVC4 326 aa17.98■□□□□ 0.47
SNX3-203ENST00000368979 PSG8Q9UQ74 426 aa17.98■□□□□ 0.47
SNX3-203ENST00000368979 RBAKDNA6NC62 111 aa17.98■□□□□ 0.47
SNX3-203ENST00000368979 GCGP01275 180 aa17.98■□□□□ 0.47
SNX3-203ENST00000368979 TMEM88Q6PEY1 159 aa17.98■□□□□ 0.47
SNX3-203ENST00000368979 GBGT1Q8N5D6 347 aa17.98■□□□□ 0.47
SNX3-203ENST00000368979 NHLRC2Q8NBF2 726 aa17.98■□□□□ 0.47
SNX3-203ENST00000368979 FBLL1A6NHQ2 334 aaKnown RBP17.97■□□□□ 0.47
SNX3-203ENST00000368979 PRNTQ86SH4 94 aa17.97■□□□□ 0.47
SNX3-203ENST00000368979 CITED1Q99966 193 aa17.97■□□□□ 0.47
SNX3-203ENST00000368979 SIGLEC8Q9NYZ4 499 aa17.97■□□□□ 0.47
SNX3-203ENST00000368979 K7EQG2 157 aa17.96■□□□□ 0.47
SNX3-203ENST00000368979 MT-ND4LP03901 98 aa17.96■□□□□ 0.47
SNX3-203ENST00000368979 OR5I1Q13606 314 aa17.96■□□□□ 0.47
SNX3-203ENST00000368979 KRTAP24-1Q3LI83 254 aa17.96■□□□□ 0.47
SNX3-203ENST00000368979 SFRP2Q96HF1 295 aa17.96■□□□□ 0.47
SNX3-203ENST00000368979 CTDSP1Q9GZU7 261 aa17.96■□□□□ 0.47
SNX3-203ENST00000368979 TMEM242Q9NWH2 141 aa17.96■□□□□ 0.47
SNX3-203ENST00000368979 MGST1P10620 155 aaKnown RBP17.95■□□□□ 0.46
SNX3-203ENST00000368979 ID1P41134 155 aa17.95■□□□□ 0.46
SNX3-203ENST00000368979 KRTAP21-3Q3LHN1 58 aa17.95■□□□□ 0.46
SNX3-203ENST00000368979 TMEM183AQ8IXX5 376 aa17.95■□□□□ 0.46
SNX3-203ENST00000368979 DYNLRB2Q8TF09 96 aa17.95■□□□□ 0.46
SNX3-203ENST00000368979 ANAPC16Q96DE5 110 aa17.95■□□□□ 0.46
SNX3-203ENST00000368979 VGLL1Q99990 258 aa17.95■□□□□ 0.46
SNX3-203ENST00000368979 SMCO4Q9NRQ5 59 aa17.95■□□□□ 0.46
SNX3-203ENST00000368979 ZFP30Q9Y2G7 519 aa17.95■□□□□ 0.46
SNX3-203ENST00000368979 DEFB114Q30KQ6 69 aa17.94■□□□□ 0.46
SNX3-203ENST00000368979 WFDC3Q8IUB2 231 aa17.94■□□□□ 0.46
SNX3-203ENST00000368979 ZNF738Q8NE65 137 aa17.94■□□□□ 0.46
SNX3-203ENST00000368979 TUBA4BQ9H853 241 aa17.93■□□□□ 0.46
SNX3-203ENST00000368979 TFPI2P48307 235 aa17.93■□□□□ 0.46
SNX3-203ENST00000368979 PRIMA1Q86XR5 153 aa17.93■□□□□ 0.46
SNX3-203ENST00000368979 TMEM61Q8N0U2 210 aa17.93■□□□□ 0.46
SNX3-203ENST00000368979 FAM24BQ8N5W8 94 aa17.93■□□□□ 0.46
SNX3-203ENST00000368979 TRAV2A0A0B4J234 112 aa17.92■□□□□ 0.46
SNX3-203ENST00000368979 PAFAH1B2P68402 229 aa17.92■□□□□ 0.46
SNX3-203ENST00000368979 ERCC8Q13216 396 aa17.92■□□□□ 0.46
SNX3-203ENST00000368979 H7BYZ3 331 aa17.91■□□□□ 0.46
SNX3-203ENST00000368979 PPP1R2P9O14990 202 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms