RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 DOCK9Q9BZ29 2069 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 LOC105371267A0A1B0GV96 52 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 GAGE12BA1L429 117 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 GAGE7O76087 117 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 Q8TCH9 128 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 LINC00587B1AMM8 73 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 TCTEX1D4Q5JR98 221 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 TEX36Q5VZQ5 186 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 REG4Q9BYZ8 158 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 MS4A6AQ9H2W1 248 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 TRAV26-2A0A0B4J265 109 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 MEGF9Q9H1U4 602 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 NLRC5Q86WI3 1866 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 C5orf30Q96GV9 206 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 SLC25A2Q9BXI2 301 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 VCYO14598 125 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 AMBPP02760 352 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 LIME1Q9H400 295 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 NDUFA4L2Q9NRX3 87 aa10.33□□□□□ -0.76
PTPRK-207ENST00000368226 GATA3P23771 443 aa10.32□□□□□ -0.76
PTPRK-207ENST00000368226 DAD1P61803 113 aa10.32□□□□□ -0.76
PTPRK-207ENST00000368226 TMEM14BQ9NUH8 114 aa10.32□□□□□ -0.76
PTPRK-207ENST00000368226 DEFB136Q30KP8 78 aa10.32□□□□□ -0.76
PTPRK-207ENST00000368226 MORN3Q6PF18 240 aaPredicted RBP10.32□□□□□ -0.76
PTPRK-207ENST00000368226 GUSBP1Q15486 140 aa10.32□□□□□ -0.76
PTPRK-207ENST00000368226 Q6ZS49 121 aa10.32□□□□□ -0.76
PTPRK-207ENST00000368226 CYYR1Q96J86 154 aa10.32□□□□□ -0.76
PTPRK-207ENST00000368226 COLCA2A8K830 154 aa10.32□□□□□ -0.76
PTPRK-207ENST00000368226 NEGR1Q7Z3B1 354 aa10.31□□□□□ -0.76
PTPRK-207ENST00000368226 HIST3H2BBQ8N257 126 aa10.31□□□□□ -0.76
PTPRK-207ENST00000368226 ORAOV1Q8WV07 137 aa10.31□□□□□ -0.76
PTPRK-207ENST00000368226 TRAV1-1A0A0B4J248 108 aa10.31□□□□□ -0.76
PTPRK-207ENST00000368226 SPOCK3Q9BQ16 436 aa10.31□□□□□ -0.76
PTPRK-207ENST00000368226 NBASA2RRP1 2371 aa10.31□□□□□ -0.76
PTPRK-207ENST00000368226 INS-IGF2F8WCM5 200 aa10.31□□□□□ -0.76
PTPRK-207ENST00000368226 C8orf86Q6ZUL3 223 aa10.31□□□□□ -0.76
PTPRK-207ENST00000368226 TANC1Q9C0D5 1861 aa10.31□□□□□ -0.76
PTPRK-207ENST00000368226 IGHV4-59P01825 116 aa10.31□□□□□ -0.76
PTPRK-207ENST00000368226 RSPO1Q2MKA7 263 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-207ENST00000368226 GGTLC3B5MD39 225 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 PLXND1Q9Y4D7 1925 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 A0A087X0K7 114 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 AZU1P20160 251 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 LMO1P25800 156 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 OR2K2Q8NGT1 345 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 DEFB112Q30KQ8 113 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 SHISA9B4DS77 424 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 IGKV1-39P01597 117 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 IGKV1D-39P04432 117 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 A0A1B0GUS0 222 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 IGLV1-44P01699 117 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 ERG28Q9UKR5 140 aa10.3□□□□□ -0.76
PTPRK-207ENST00000368226 WT1-ASQ06250 92 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 MST1LQ2TV78 715 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 C22orf46C9J442 243 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 ZNF479Q96JC4 524 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 NOTCH4Q99466 2003 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 HOXB4P17483 251 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-207ENST00000368226 CLPSL2Q6UWE3 100 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 HAPLN4Q86UW8 402 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 LYPD1Q8N2G4 141 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 RASL10AQ92737 203 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 ABCA4P78363 2273 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 TRBV24-1A0A075B6N3 115 aa10.29□□□□□ -0.76
PTPRK-207ENST00000368226 ETV2O00321 342 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-207ENST00000368226 C15orf65H3BRN8 121 aa10.28□□□□□ -0.76
PTPRK-207ENST00000368226 TNFRSF6BO95407 300 aa10.28□□□□□ -0.76
PTPRK-207ENST00000368226 SS18Q15532 418 aa10.28□□□□□ -0.76
PTPRK-207ENST00000368226 LAMTOR3Q9UHA4 124 aa10.28□□□□□ -0.76
PTPRK-207ENST00000368226 TMEM238C9JI98 176 aa10.28□□□□□ -0.76
PTPRK-207ENST00000368226 BCL6BQ8N143 479 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-207ENST00000368226 C1orf147Q96MC9 270 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-207ENST00000368226 TMEM242Q9NWH2 141 aa10.28□□□□□ -0.76
PTPRK-207ENST00000368226 CTSZQ9UBR2 303 aa10.28□□□□□ -0.76
PTPRK-207ENST00000368226 UBE2CO00762 179 aa10.28□□□□□ -0.76
PTPRK-207ENST00000368226 ANXA2RQ3ZCQ2 193 aa10.28□□□□□ -0.76
PTPRK-207ENST00000368226 PRIMA1Q86XR5 153 aa10.28□□□□□ -0.76
PTPRK-207ENST00000368226 GAGE6Q13070 117 aa10.27□□□□□ -0.76
PTPRK-207ENST00000368226 SAMD5Q5TGI4 173 aa10.27□□□□□ -0.76
PTPRK-207ENST00000368226 C3orf79P0CE67 100 aa10.27□□□□□ -0.77
PTPRK-207ENST00000368226 TP53TG1Q9Y2A0 90 aa10.27□□□□□ -0.77
PTPRK-207ENST00000368226 VWC2LB2RUY7 222 aa10.27□□□□□ -0.77
PTPRK-207ENST00000368226 F6UB75 175 aa10.27□□□□□ -0.77
PTPRK-207ENST00000368226 TIMM21Q9BVV7 248 aa10.27□□□□□ -0.77
PTPRK-207ENST00000368226 HLA-DMBP28068 263 aa10.27□□□□□ -0.77
PTPRK-207ENST00000368226 FAM90A2PQ658T7 463 aa10.27□□□□□ -0.77
PTPRK-207ENST00000368226 SRSF8Q9BRL6 282 aaKnown RBP10.27□□□□□ -0.77
PTPRK-207ENST00000368226 ARFGEF3Q5TH69 2177 aa10.27□□□□□ -0.77
PTPRK-207ENST00000368226 TRAV8-4A0A0B4J246 113 aa10.27□□□□□ -0.77
PTPRK-207ENST00000368226 ADCYAP1P18509 176 aa10.27□□□□□ -0.77
PTPRK-207ENST00000368226 TRBV19A0A075B6N1 114 aa10.26□□□□□ -0.77
PTPRK-207ENST00000368226 PFN1P07737 140 aaKnown RBP10.26□□□□□ -0.77
PTPRK-207ENST00000368226 STPG4Q8N801 248 aa10.26□□□□□ -0.77
PTPRK-207ENST00000368226 DOCK10Q96BY6 2186 aa10.26□□□□□ -0.77
PTPRK-207ENST00000368226 PLXNA2O75051 1894 aa10.26□□□□□ -0.77
PTPRK-207ENST00000368226 SPRY2O43597 315 aa10.26□□□□□ -0.77
PTPRK-207ENST00000368226 TMEM75Q8N9X5 138 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms