RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 RNF5Q99942 180 aa9.68□□□□□ -0.86
PTPN7-202ENST00000367279 ASH1LQ9NR48 2969 aaKnown RBP9.68□□□□□ -0.86
PTPN7-202ENST00000367279 PET117Q6UWS5 81 aa9.67□□□□□ -0.86
PTPN7-202ENST00000367279 IGHV3-49A0A0A0MS15 119 aa9.67□□□□□ -0.86
PTPN7-202ENST00000367279 S100A7AQ86SG5 101 aa9.67□□□□□ -0.86
PTPN7-202ENST00000367279 FANCD2OSQ96PS1 177 aa9.67□□□□□ -0.86
PTPN7-202ENST00000367279 C1RLQ9NZP8 487 aa9.67□□□□□ -0.86
PTPN7-202ENST00000367279 TMEM11P17152 192 aa9.67□□□□□ -0.86
PTPN7-202ENST00000367279 PPIFP30405 207 aaKnown RBP9.67□□□□□ -0.86
PTPN7-202ENST00000367279 DYNAPQ8N1N2 210 aa9.67□□□□□ -0.86
PTPN7-202ENST00000367279 CFHR4Q92496 578 aa9.67□□□□□ -0.86
PTPN7-202ENST00000367279 TRAV30A0A087WSZ9 112 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 UQCRFS1P47985 274 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 RNF151Q2KHN1 245 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 VMO1Q7Z5L0 202 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 THYN1Q9P016 225 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 SELENOKQ9Y6D0 94 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 GPR183P32249 361 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 CKS2P33552 79 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 UBE2V1Q13404 147 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 VGLL1Q99990 258 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 SVEP1Q4LDE5 3571 aa9.66□□□□□ -0.86
PTPN7-202ENST00000367279 WI2-2373I1.2A0A1W2PRP0 233 aa9.65□□□□□ -0.86
PTPN7-202ENST00000367279 PAX2Q02962 417 aa9.65□□□□□ -0.86
PTPN7-202ENST00000367279 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
PTPN7-202ENST00000367279 CBY1Q9Y3M2 126 aa9.65□□□□□ -0.86
PTPN7-202ENST00000367279 K7ENP7 123 aa9.65□□□□□ -0.86
PTPN7-202ENST00000367279 CRXO43186 299 aaPredicted RBP9.65□□□□□ -0.86
PTPN7-202ENST00000367279 RPL7P18124 248 aaKnown RBP9.65□□□□□ -0.86
PTPN7-202ENST00000367279 ZNF747Q9BV97 191 aa9.65□□□□□ -0.86
PTPN7-202ENST00000367279 SIGLEC8Q9NYZ4 499 aa9.65□□□□□ -0.86
PTPN7-202ENST00000367279 RABAC1Q9UI14 185 aa9.65□□□□□ -0.86
PTPN7-202ENST00000367279 IGLV11-55A0A075B6I3 123 aa9.65□□□□□ -0.87
PTPN7-202ENST00000367279 ZNF207O43670 478 aaKnown RBP9.65□□□□□ -0.87
PTPN7-202ENST00000367279 NDUFS7O75251 213 aa9.65□□□□□ -0.87
PTPN7-202ENST00000367279 HOXB4P17483 251 aaPredicted RBP9.65□□□□□ -0.87
PTPN7-202ENST00000367279 ERCC8Q13216 396 aa9.65□□□□□ -0.87
PTPN7-202ENST00000367279 C18orf15Q96N68 181 aa9.65□□□□□ -0.87
PTPN7-202ENST00000367279 SRSF8Q9BRL6 282 aaKnown RBP9.65□□□□□ -0.87
PTPN7-202ENST00000367279 CACNG7P62955 275 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 PSG9Q00887 426 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 ZNF562Q6V9R5 426 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 ORMDL3Q8N138 153 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 OR11H6Q8NGC7 330 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 MRPS12O15235 138 aaKnown RBP9.64□□□□□ -0.87
PTPN7-202ENST00000367279 EGR2P11161 476 aaPredicted RBP9.64□□□□□ -0.87
PTPN7-202ENST00000367279 BVES-AS1Q5T3Y7 98 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 SCRT2Q9NQ03 307 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 PRTN3P24158 256 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 MRPL51Q4U2R6 128 aaKnown RBP9.64□□□□□ -0.87
PTPN7-202ENST00000367279 Q6AWC8 147 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 RNF182Q8N6D2 247 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 FER1L6-AS1Q8NA97 138 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 LY6G5BQ8NDX9 201 aa9.64□□□□□ -0.87
PTPN7-202ENST00000367279 RNASE8Q8TDE3 154 aaKnown RBP9.64□□□□□ -0.87
PTPN7-202ENST00000367279 ZNF80P51504 273 aaPredicted RBP9.63□□□□□ -0.87
PTPN7-202ENST00000367279 C12orf54Q6X4T0 127 aa9.63□□□□□ -0.87
PTPN7-202ENST00000367279 NPBQ8NG41 125 aa9.63□□□□□ -0.87
PTPN7-202ENST00000367279 PRR25Q96S07 402 aa9.63□□□□□ -0.87
PTPN7-202ENST00000367279 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
PTPN7-202ENST00000367279 SCGB2A1O75556 95 aa9.63□□□□□ -0.87
PTPN7-202ENST00000367279 NDUFA3O95167 84 aa9.63□□□□□ -0.87
PTPN7-202ENST00000367279 FOXE3Q13461 319 aa9.63□□□□□ -0.87
PTPN7-202ENST00000367279 FAM104BQ5XKR9 115 aa9.63□□□□□ -0.87
PTPN7-202ENST00000367279 CCDC144NLQ6NUI1 221 aa9.63□□□□□ -0.87
PTPN7-202ENST00000367279 C16orf54Q6UWD8 224 aa9.63□□□□□ -0.87
PTPN7-202ENST00000367279 A0A1B0GW15 77 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 SAPCD1Q5SSQ6 148 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 LINC01545Q5VT33 79 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 NPYP01303 97 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 EVI2AP22794 236 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 PDE6HQ13956 83 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 AMMECR1LQ6DCA0 310 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 TRBV6-1A0A0K0K1D8 114 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 F8W735 103 aaPredicted RBP9.62□□□□□ -0.87
PTPN7-202ENST00000367279 CTSGP08311 255 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 NMUP48645 174 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 C15orf32Q32M92 178 aa9.62□□□□□ -0.87
PTPN7-202ENST00000367279 J3KRW8 73 aa9.61□□□□□ -0.87
PTPN7-202ENST00000367279 OVOL3O00110 214 aa9.61□□□□□ -0.87
PTPN7-202ENST00000367279 CLEC3BP05452 202 aa9.61□□□□□ -0.87
PTPN7-202ENST00000367279 RHOGP84095 191 aa9.61□□□□□ -0.87
PTPN7-202ENST00000367279 ANKRD39Q53RE8 183 aa9.61□□□□□ -0.87
PTPN7-202ENST00000367279 M0R1W7 72 aa9.61□□□□□ -0.87
PTPN7-202ENST00000367279 TAX1BP3O14907 124 aa9.61□□□□□ -0.87
PTPN7-202ENST00000367279 ZFP36P26651 326 aaKnown RBP9.61□□□□□ -0.87
PTPN7-202ENST00000367279 PCP4P48539 62 aa9.61□□□□□ -0.87
PTPN7-202ENST00000367279 CLEC19AQ6UXS0 136 aa9.61□□□□□ -0.87
PTPN7-202ENST00000367279 NAA38Q9BRA0 125 aaKnown RBP9.61□□□□□ -0.87
PTPN7-202ENST00000367279 MS4A6AQ9H2W1 248 aa9.61□□□□□ -0.87
PTPN7-202ENST00000367279 HRNRQ86YZ3 2850 aaPredicted RBP9.6□□□□□ -0.87
PTPN7-202ENST00000367279 PRAC2D3DTV9 90 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 BMI1P35226 326 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 HIST1H1AQ02539 215 aaPredicted RBP9.6□□□□□ -0.87
PTPN7-202ENST00000367279 TTC9CQ8N5M4 171 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 IGHV3OR16-10A0A075B7F0 116 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 UBTD1Q9HAC8 227 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 RAXQ9Y2V3 346 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 SMAD5-AS1Q9Y6J3 95 aa9.6□□□□□ -0.87
PTPN7-202ENST00000367279 IGHV7-81A0A0B4J1V7 117 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms