RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 IGKV1D-39P04432 117 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 POU2AF1Q16633 256 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 SFTA2Q6UW10 78 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 ZNF114Q8NC26 417 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 MMP23AO75900 390 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 PRTN3P24158 256 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 MSRB2Q9Y3D2 182 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 WIPF3A6NGB9 483 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 ERCC8Q13216 396 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 ZNF726P1Q15940 193 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 ZNF124Q15973 351 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 ZNF664Q8N3J9 261 aa7.29□□□□□ -1.24
SYNE1-205ENST00000367251 NPIPB5A8MRT5 1133 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 C15orf65H3BRN8 121 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 HIST1H4AP62805 103 aaKnown RBP7.28□□□□□ -1.24
SYNE1-205ENST00000367251 IGKV2-40A0A087WW87 121 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-205ENST00000367251 TRAV13-1A0A0B4J241 112 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 IGKV2D-40P01614 121 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-205ENST00000367251 RBMY1FQ15415 496 aaKnown RBP7.28□□□□□ -1.24
SYNE1-205ENST00000367251 PLXNB3Q9ULL4 1909 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 PLCE1Q9P212 2302 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 NHP2Q9NX24 153 aaKnown RBP7.28□□□□□ -1.24
SYNE1-205ENST00000367251 A8MWP6 167 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 H3BMM0 161 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 FCN3O75636 299 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 NPC2P61916 151 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 VWC2Q2TAL6 325 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 UBE2WQ96B02 151 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 SYNJ2BPP57105 145 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 CFHR3Q02985 330 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 KLF5Q13887 457 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-205ENST00000367251 C17orf58Q2M2W7 97 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 WDR86Q86TI4 376 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 THAP8Q8NA92 274 aa7.28□□□□□ -1.24
SYNE1-205ENST00000367251 SMIM27A0A1W2PRY6 76 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 SRRM4A7MD48 611 aaKnown RBP7.27□□□□□ -1.25
SYNE1-205ENST00000367251 PLEKHB2Q96CS7 222 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 ZNF625Q96I27 306 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-205ENST00000367251 BPESC1Q9GZL8 116 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-205ENST00000367251 A0A1W2PPI3 338 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 KLRD1Q13241 179 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 SAMD5Q5TGI4 173 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 ZNF562Q6V9R5 426 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 IGLV3-9A0A075B6K5 115 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 WISP1O95388 367 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 KLF17Q5JT82 389 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-205ENST00000367251 PRSS46E5RG02 174 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 IGKV1-16P04430 117 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 Q6ZR03 302 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 RASL10AQ92737 203 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 ZNF479Q96JC4 524 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 XCL2Q9UBD3 114 aa7.27□□□□□ -1.25
SYNE1-205ENST00000367251 TRAV8-2A0A0B4J237 113 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 VCYO14598 125 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 CD5LO43866 347 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 LYPD6Q86Y78 171 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 CACNA1HO95180 2353 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 TMEM238C9JI98 176 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 DEFB104AQ8WTQ1 72 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 DKK1O94907 266 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 EVI2AP22794 236 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 DEFB131AP59861 70 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 FNDC4Q9H6D8 234 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-205ENST00000367251 NDUFS8O00217 210 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 MSMBP08118 114 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 LYPD2Q6UXB3 125 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 SMIM2Q9BVW6 85 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 ESDP10768 282 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 SSBP2P81877 361 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-205ENST00000367251 TAL2Q16559 108 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 PLA2G2CQ5R387 149 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 V9GYV3 84 aa7.26□□□□□ -1.25
SYNE1-205ENST00000367251 M0R2P5 195 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 RPL15P61313 204 aaKnown RBP7.25□□□□□ -1.25
SYNE1-205ENST00000367251 CD300EQ496F6 205 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-205ENST00000367251 E7EQL1 145 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 GUSBP1Q15486 140 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 C18orf32Q8TCD1 76 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 Q9HAA7 133 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 UBE2V1Q13404 147 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 POLR3KQ9Y2Y1 108 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-205ENST00000367251 FANCMQ8IYD8 2048 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 IGKV2D-24A0A075B6R9 120 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 ZNF106Q9H2Y7 1883 aaKnown RBP7.25□□□□□ -1.25
SYNE1-205ENST00000367251 KIAA1671Q9BY89 1806 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 TRBV19A0A075B6N1 114 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 IGKV1OR2-108A0A075B7D4 117 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 CLPSL1A2RUU4 121 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 IGHV2-70P01814 119 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 UBE2E1P51965 193 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 NDPQ00604 133 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 TEX43Q6ZNM6 134 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 KAAG1Q9UBP8 84 aa7.25□□□□□ -1.25
SYNE1-205ENST00000367251 PTPRQQ9UMZ3 2332 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 GATA3P23771 443 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 ATXN8Q156A1 80 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 IL17RELQ6ZVW7 336 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 TRAV25A0A0B4J276 109 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms