RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 RAB5CP51148 216 aa-2.29□□□□□ -2.78
RNU6-238P-201ENST00000363313 H3F3AP84243 136 aa-2.29□□□□□ -2.78
RNU6-238P-201ENST00000363313 SREK1IP1Q8N9Q2 155 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-238P-201ENST00000363313 TMEM161BQ8NDZ6 487 aa-2.29□□□□□ -2.78
RNU6-238P-201ENST00000363313 DIRAS2Q96HU8 199 aa-2.29□□□□□ -2.78
RNU6-238P-201ENST00000363313 HYLS1Q96M11 299 aa-2.29□□□□□ -2.78
RNU6-238P-201ENST00000363313 TMEM126AQ9H061 195 aa-2.29□□□□□ -2.78
RNU6-238P-201ENST00000363313 SPANXB1Q9NS25 103 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-238P-201ENST00000363313 CYSLTR1Q9Y271 337 aa-2.29□□□□□ -2.78
RNU6-238P-201ENST00000363313 NUP98P52948 1817 aa-2.29□□□□□ -2.78
RNU6-238P-201ENST00000363313 EYSQ5T1H1 3165 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 LRRK2Q5S007 2527 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 KIAA1549LQ6ZVL6 1849 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 TRAV17A0A0B4J275 112 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 EXOC1LA0A1B0GW35 172 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 MKRN2OSH3BPM6 223 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 ATP6V1G2O95670 118 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 IGF2P01344 180 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 UGT2B7P16662 529 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 SULT1A1P50225 295 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 RHOBP62745 196 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 FAM74A4Q5TZK3 123 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 C19orf60Q96EN9 201 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 NINQ8N4C6 2090 aa-2.3□□□□□ -2.78
RNU6-238P-201ENST00000363313 PLXNB2O15031 1838 aa-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 ZZEF1O43149 2961 aa-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 KALRNO60229 2985 aa-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 NEO1Q92859 1461 aa-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 ORM1P02763 201 aa-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 MARCKSL1P49006 195 aa-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 ZNHIT3Q15649 155 aaPredicted RBP-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 Q6ZRX8 168 aa-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 SYCE1Q8N0S2 351 aa-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 ZHX1-C8orf76Q96EF9 292 aa-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 RELNP78509 3460 aa-2.31□□□□□ -2.78
RNU6-238P-201ENST00000363313 TRGV10A0A0A0MS01 117 aa-2.32□□□□□ -2.78
RNU6-238P-201ENST00000363313 OR4C46A6NHA9 309 aa-2.32□□□□□ -2.78
RNU6-238P-201ENST00000363313 C1orf196B1AJZ1 125 aa-2.32□□□□□ -2.78
RNU6-238P-201ENST00000363313 NDUFB3O43676 98 aa-2.32□□□□□ -2.78
RNU6-238P-201ENST00000363313 TCRBP04435 133 aa-2.32□□□□□ -2.78
RNU6-238P-201ENST00000363313 NEDD8Q15843 81 aa-2.32□□□□□ -2.78
RNU6-238P-201ENST00000363313 LRRC18Q8N456 261 aa-2.32□□□□□ -2.78
RNU6-238P-201ENST00000363313 OR5D16Q8NGK9 328 aa-2.32□□□□□ -2.78
RNU6-238P-201ENST00000363313 TMEM133Q9H2Q1 129 aa-2.32□□□□□ -2.78
RNU6-238P-201ENST00000363313 MRPL36Q9P0J6 103 aaKnown RBP-2.32□□□□□ -2.78
RNU6-238P-201ENST00000363313 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 NBASA2RRP1 2371 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 DUXBA0A1W2PPF3 345 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 hDV103S1A0JD37 113 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 CSTAP01040 98 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 SERPINE1P05121 402 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 SPRR1BP22528 89 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 PHBP35232 272 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 RPL5P46777 297 aaKnown RBP-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 DEFB135Q30KP9 77 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 DEFB112Q30KQ8 113 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 HACD4Q5VWC8 232 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 C20orf27Q9GZN8 174 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 CST11Q9H112 138 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 TMEM242Q9NWH2 141 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 DMXL1Q9Y485 3027 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 CHD7Q9P2D1 2997 aa-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 CDK12Q9NYV4 1490 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 SMG1Q96Q15 3661 aaKnown RBP-2.33□□□□□ -2.78
RNU6-238P-201ENST00000363313 TINCRA0A1B0GVN0 87 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 H0Y980 276 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 PYYP10082 97 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 UCHL3P15374 230 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 GCHFRP30047 84 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 KDELR2P33947 212 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 GLRXP35754 106 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 CLDN12P56749 244 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 RSU1Q15404 277 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 C22orf39Q6P5X5 142 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 CD302Q8IX05 232 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 OR4K15Q8NH41 348 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 ARL5BQ96KC2 179 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 CMTM6Q9NX76 183 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 COA4Q9NYJ1 87 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 FBXO5Q9UKT4 447 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 TMEM56-RWDD3S4R434 201 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 NCOA1Q15788 1441 aa-2.34□□□□□ -2.78
RNU6-238P-201ENST00000363313 CASZ1Q86V15 1759 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 M0R036 132 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 SPINK4O60575 86 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 HLA-DRB1P01911 266 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 SMIM10L2AP0DMW4 78 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 SMIM10L2BP0DMW5 78 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 ELOF1P60002 83 aaKnown RBP-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 RAB5BP61020 215 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 HAMPP81172 84 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 KRR1Q13601 381 aaKnown RBP-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 DIAPH2-AS1Q14236 149 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 SPOPLQ6IQ16 392 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 LINC00269Q8N2A0 174 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 CHCHD1Q96BP2 118 aaKnown RBP-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 AP1S3Q96PC3 154 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 PRTFDC1Q9NRG1 225 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 SPCS1Q9Y6A9 102 aa-2.35□□□□□ -2.79
RNU6-238P-201ENST00000363313 ZCCHC6Q5VYS8 1495 aaKnown RBP-2.35□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms