RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 GAGE4Q13068 117 aa11.7□□□□□ -0.54
NUP98-203ENST00000359171 MDC1Q14676 2089 aaKnown RBP11.7□□□□□ -0.54
NUP98-203ENST00000359171 C8orf49Q96NF6 230 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 BRD3OSQ6XYD6 125 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 SMIM2Q9BVW6 85 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 SIGLEC8Q9NYZ4 499 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 PIKFYVEQ9Y2I7 2098 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 SPACA3Q8IXA5 215 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 CARD19Q96LW7 228 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 DOCK5Q9H7D0 1870 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 RPL35AP18077 110 aaKnown RBP11.69□□□□□ -0.54
NUP98-203ENST00000359171 MSRB2Q9Y3D2 182 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 DKK1O94907 266 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 IGHG3P01860 377 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 DOPEY2Q9Y3R5 2298 aa11.69□□□□□ -0.54
NUP98-203ENST00000359171 C1orf147Q96MC9 270 aaPredicted RBP11.68□□□□□ -0.54
NUP98-203ENST00000359171 TUBGCP6Q96RT7 1819 aa11.68□□□□□ -0.54
NUP98-203ENST00000359171 TRBV25-1A0A075B6N4 114 aa11.68□□□□□ -0.54
NUP98-203ENST00000359171 DEFB131AP59861 70 aa11.68□□□□□ -0.54
NUP98-203ENST00000359171 PYGO2Q9BRQ0 406 aa11.68□□□□□ -0.54
NUP98-203ENST00000359171 Q0VFX4 171 aa11.68□□□□□ -0.54
NUP98-203ENST00000359171 TRIP12Q14669 1992 aaPredicted RBP11.67□□□□□ -0.54
NUP98-203ENST00000359171 LYPD2Q6UXB3 125 aa11.67□□□□□ -0.54
NUP98-203ENST00000359171 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.67□□□□□ -0.54
NUP98-203ENST00000359171 IGHV1OR15-1A0A075B7D0 117 aa11.67□□□□□ -0.54
NUP98-203ENST00000359171 CRIPAKQ8N1N5 446 aa11.67□□□□□ -0.54
NUP98-203ENST00000359171 TMEM126AQ9H061 195 aa11.67□□□□□ -0.54
NUP98-203ENST00000359171 NPYP01303 97 aa11.67□□□□□ -0.54
NUP98-203ENST00000359171 TRAV13-2A0A0B4J235 113 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 H3BMG7 143 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 AZU1P20160 251 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 C20orf78Q9BR46 151 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 KNCNA6PVL3 124 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 J3QQQ9 107 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 GAGE5Q13069 117 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 CD59P13987 128 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 CRLF1O75462 422 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 PFN2P35080 140 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 ANKRD29Q8N6D5 301 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 TMEM105Q8N8V8 129 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 KLHL30-AS1Q8NEE0 82 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 H3BRN7 92 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 IGKV1-39P01597 117 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 IGHG4P01861 327 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 IGKV1D-39P04432 117 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 SAA4P35542 130 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 SYNJ2BPP57105 145 aa11.66□□□□□ -0.54
NUP98-203ENST00000359171 OTOFQ9HC10 1997 aa11.65□□□□□ -0.54
NUP98-203ENST00000359171 ZNF561-AS1K7EIQ3 104 aa11.65□□□□□ -0.54
NUP98-203ENST00000359171 PSCAO43653 123 aa11.65□□□□□ -0.54
NUP98-203ENST00000359171 ETV2O00321 342 aaPredicted RBP11.65□□□□□ -0.54
NUP98-203ENST00000359171 SRSF2Q01130 221 aaKnown RBP11.65□□□□□ -0.54
NUP98-203ENST00000359171 SUMO4Q6EEV6 95 aa11.65□□□□□ -0.54
NUP98-203ENST00000359171 ZNF833PQ6ZTB9 187 aa11.65□□□□□ -0.54
NUP98-203ENST00000359171 DOCK4Q8N1I0 1966 aa11.65□□□□□ -0.54
NUP98-203ENST00000359171 ABCA1O95477 2261 aa11.65□□□□□ -0.54
NUP98-203ENST00000359171 Q8TCH9 128 aa11.65□□□□□ -0.55
NUP98-203ENST00000359171 VWC2Q2TAL6 325 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 TCTEX1D4Q5JR98 221 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 RGPD3A6NKT7 1758 aaPredicted RBP11.64□□□□□ -0.55
NUP98-203ENST00000359171 GATA4P43694 442 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 C12orf74Q32Q52 190 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 TMEM258P61165 79 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 NTN5Q8WTR8 489 aaPredicted RBP11.64□□□□□ -0.55
NUP98-203ENST00000359171 INTS1Q8N201 2190 aaKnown RBP11.64□□□□□ -0.55
NUP98-203ENST00000359171 K7EM74 188 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 COL8A2P25067 703 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 C15orf53Q8NAA6 179 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 IGLC7A0M8Q6 106 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 UBE2E1P51965 193 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 TMEM243Q9BU79 118 aa11.64□□□□□ -0.55
NUP98-203ENST00000359171 A0A0G2JNJ9 132 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 Q9UFV3 132 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 CACNA1EQ15878 2313 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 C8orf86Q6ZUL3 223 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 CDKN1BP46527 198 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 ANXA2RQ3ZCQ2 193 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 WIPF2Q8TF74 440 aaPredicted RBP11.63□□□□□ -0.55
NUP98-203ENST00000359171 ZDBF2Q9HCK1 2354 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 HOXD3P31249 432 aaPredicted RBP11.63□□□□□ -0.55
NUP98-203ENST00000359171 LINC00311Q8N616 119 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 NDUFS7O75251 213 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 HERVK_113P63121 156 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 SPINK13Q1W4C9 94 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 SCN10AQ9Y5Y9 1956 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 RALGAPA1Q6GYQ0 2036 aa11.63□□□□□ -0.55
NUP98-203ENST00000359171 NKAPP1Q8N9T2 125 aa11.62□□□□□ -0.55
NUP98-203ENST00000359171 SDK2Q58EX2 2172 aa11.62□□□□□ -0.55
NUP98-203ENST00000359171 COL11A1P12107 1806 aaPredicted RBP11.62□□□□□ -0.55
NUP98-203ENST00000359171 AMTNQ6UX39 209 aa11.62□□□□□ -0.55
NUP98-203ENST00000359171 DSCR8Q96T75 97 aa11.62□□□□□ -0.55
NUP98-203ENST00000359171 KIF26BQ2KJY2 2108 aa11.62□□□□□ -0.55
NUP98-203ENST00000359171 KIR2DL5BA0A0G2JN68 375 aa11.62□□□□□ -0.55
NUP98-203ENST00000359171 KIR2DL5BA0A0G2JPC4 375 aa11.62□□□□□ -0.55
NUP98-203ENST00000359171 KIR2DL5AQ8N109 375 aa11.62□□□□□ -0.55
NUP98-203ENST00000359171 SPTBN1Q01082 2364 aaKnown RBP11.62□□□□□ -0.55
NUP98-203ENST00000359171 COA6Q5JTJ3 125 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms