RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 RPP21Q9H633 154 aaKnown RBP17.63■□□□□ 0.41
POLR2J2-202ENST00000358438 ZNF492Q9P255 531 aa17.63■□□□□ 0.41
POLR2J2-202ENST00000358438 RPL27AP46776 148 aaKnown RBP17.63■□□□□ 0.41
POLR2J2-202ENST00000358438 PAX8Q06710 450 aa17.63■□□□□ 0.41
POLR2J2-202ENST00000358438 PLGLAQ15195 96 aa17.63■□□□□ 0.41
POLR2J2-202ENST00000358438 CACNG8Q8WXS5 425 aa17.63■□□□□ 0.41
POLR2J2-202ENST00000358438 CSMD2Q7Z408 3487 aa17.63■□□□□ 0.41
POLR2J2-202ENST00000358438 MAP1AP78559 2803 aaPredicted RBP17.63■□□□□ 0.41
POLR2J2-202ENST00000358438 ANKRD17O75179 2603 aaKnown RBP17.62■□□□□ 0.41
POLR2J2-202ENST00000358438 NBR2O15453 112 aa17.62■□□□□ 0.41
POLR2J2-202ENST00000358438 HES1Q14469 280 aa17.62■□□□□ 0.41
POLR2J2-202ENST00000358438 OR1L4Q8NGR5 311 aa17.62■□□□□ 0.41
POLR2J2-202ENST00000358438 PRSS22Q9GZN4 317 aa17.62■□□□□ 0.41
POLR2J2-202ENST00000358438 NPBQ8NG41 125 aa17.62■□□□□ 0.41
POLR2J2-202ENST00000358438 LINC00479Q96M42 142 aa17.62■□□□□ 0.41
POLR2J2-202ENST00000358438 KLF12Q9Y4X4 402 aa17.62■□□□□ 0.41
POLR2J2-202ENST00000358438 SVEP1Q4LDE5 3571 aa17.61■□□□□ 0.41
POLR2J2-202ENST00000358438 NBPF19A0A087WUL8 3843 aa17.61■□□□□ 0.41
POLR2J2-202ENST00000358438 SAA4P35542 130 aa17.61■□□□□ 0.41
POLR2J2-202ENST00000358438 SUB1P53999 127 aaKnown RBP eCLIP17.61■□□□□ 0.41
POLR2J2-202ENST00000358438 PAXXQ9BUH6 204 aa17.61■□□□□ 0.41
POLR2J2-202ENST00000358438 LOC102724200A0A096LPH7 203 aaPredicted RBP17.6■□□□□ 0.41
POLR2J2-202ENST00000358438 NDUFA3O95167 84 aa17.6■□□□□ 0.41
POLR2J2-202ENST00000358438 SSBP2P81877 361 aaPredicted RBP17.6■□□□□ 0.41
POLR2J2-202ENST00000358438 OR1N2Q8NGR9 330 aa17.6■□□□□ 0.41
POLR2J2-202ENST00000358438 AJUBAQ96IF1 538 aa17.6■□□□□ 0.41
POLR2J2-202ENST00000358438 MYCNOSP40205 109 aa17.6■□□□□ 0.41
POLR2J2-202ENST00000358438 CD69Q07108 199 aa17.6■□□□□ 0.41
POLR2J2-202ENST00000358438 C5orf17Q8NAS9 161 aa17.6■□□□□ 0.41
POLR2J2-202ENST00000358438 RBPMS2Q6ZRY4 209 aaKnown RBP17.59■□□□□ 0.41
POLR2J2-202ENST00000358438 GPR82Q96P67 336 aa17.59■□□□□ 0.41
POLR2J2-202ENST00000358438 CENPVL3A0A0U1RRI6 287 aa17.59■□□□□ 0.41
POLR2J2-202ENST00000358438 SIVA1O15304 175 aa17.59■□□□□ 0.41
POLR2J2-202ENST00000358438 KRTAP10-9P60411 292 aa17.59■□□□□ 0.41
POLR2J2-202ENST00000358438 EBI3Q14213 229 aa17.59■□□□□ 0.41
POLR2J2-202ENST00000358438 SRSF12Q8WXF0 261 aaKnown RBP17.59■□□□□ 0.41
POLR2J2-202ENST00000358438 PTPN13Q12923 2485 aa17.58■□□□□ 0.4
POLR2J2-202ENST00000358438 NPFFO15130 113 aa17.58■□□□□ 0.4
POLR2J2-202ENST00000358438 FOXA3P55318 350 aaPredicted RBP17.58■□□□□ 0.4
POLR2J2-202ENST00000358438 PIP4P2Q8N4L2 257 aa17.58■□□□□ 0.4
POLR2J2-202ENST00000358438 MLST8Q9BVC4 326 aa17.58■□□□□ 0.4
POLR2J2-202ENST00000358438 POLQO75417 2590 aa17.58■□□□□ 0.4
POLR2J2-202ENST00000358438 TEX22C9J3V5 150 aa17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 SLC25A16P16260 332 aa17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 MLANAQ16655 118 aa17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 Q8N6K4 173 aa17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 OR2K2Q8NGT1 345 aa17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 MSMBP08118 114 aa17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 APELAP0DMC3 54 aa17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 HSD52Q0P140 79 aa17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 STXBP6Q8NFX7 210 aa17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 FNDC4Q9H6D8 234 aaPredicted RBP17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 EPDR1Q9UM22 224 aa17.57■□□□□ 0.4
POLR2J2-202ENST00000358438 C19orf71A6NCJ1 209 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 COX7A2P2O60397 106 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 PSG3Q16557 428 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 C5orf64Q2M2E5 130 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 OR9G4Q8NGQ1 327 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 TRAV5A0A0B4J249 113 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 CHEK1O14757 476 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 CNIH1O95406 144 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 FGF6P10767 208 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 C10orf113Q5VZT2 155 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 OR10AG1Q8NH19 301 aa17.56■□□□□ 0.4
POLR2J2-202ENST00000358438 HAX1O00165 279 aa17.55■□□□□ 0.4
POLR2J2-202ENST00000358438 P01737 135 aa17.55■□□□□ 0.4
POLR2J2-202ENST00000358438 FXYD5Q96DB9 178 aa17.55■□□□□ 0.4
POLR2J2-202ENST00000358438 FAM106CPP0CH98 169 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 SAMD13Q5VXD3 122 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 MORN5Q5VZ52 161 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 PVRIGQ6DKI7 326 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 FMC1Q96HJ9 113 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 ZNF747Q9BV97 191 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 NCBP2LA6PVI3 153 aaKnown RBP17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 B4DSR2 109 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 CSN1S1P47710 185 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 GATD1Q8NB37 220 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 OR4X2Q8NGF9 303 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 GTSF1Q8WW33 167 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 JMJD8Q96S16 334 aa17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 SRSF8Q9BRL6 282 aaKnown RBP17.54■□□□□ 0.4
POLR2J2-202ENST00000358438 ABCA12Q86UK0 2595 aa17.53■□□□□ 0.4
POLR2J2-202ENST00000358438 A0A0G2JLM5 398 aa17.53■□□□□ 0.4
POLR2J2-202ENST00000358438 IGHV1-69DA0A0B4J2H0 117 aa17.52■□□□□ 0.4
POLR2J2-202ENST00000358438 IGHV1-69P01742 117 aa17.52■□□□□ 0.4
POLR2J2-202ENST00000358438 PYYP10082 97 aa17.52■□□□□ 0.4
POLR2J2-202ENST00000358438 BMI1P35226 326 aa17.52■□□□□ 0.4
POLR2J2-202ENST00000358438 BOD1L2Q8IYS8 172 aa17.52■□□□□ 0.4
POLR2J2-202ENST00000358438 TMUB1Q9BVT8 246 aa17.52■□□□□ 0.4
POLR2J2-202ENST00000358438 NPFFR1Q9GZQ6 430 aa17.52■□□□□ 0.4
POLR2J2-202ENST00000358438 TRAV40A0A0B4J280 105 aa17.52■□□□□ 0.39
POLR2J2-202ENST00000358438 NPIPB6E9PJ23 425 aa17.52■□□□□ 0.39
POLR2J2-202ENST00000358438 H3BUT2 72 aa17.52■□□□□ 0.39
POLR2J2-202ENST00000358438 RUSC1-AS1Q66K80 236 aa17.52■□□□□ 0.39
POLR2J2-202ENST00000358438 PGLYRP4Q96LB8 373 aa17.52■□□□□ 0.39
POLR2J2-202ENST00000358438 F11RQ9Y624 299 aaKnown RBP17.52■□□□□ 0.39
POLR2J2-202ENST00000358438 IGHV3OR16-10A0A075B7F0 116 aa17.51■□□□□ 0.39
POLR2J2-202ENST00000358438 LTAP01374 205 aa17.51■□□□□ 0.39
POLR2J2-202ENST00000358438 ASPHD1Q5U4P2 390 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms