RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 CGB7P0DN87 165 aa9.08□□□□□ -0.96
FN1-204ENST00000356005 SH2D6Q7Z4S9 175 aa9.08□□□□□ -0.96
FN1-204ENST00000356005 PRB1P04280 392 aa9.08□□□□□ -0.96
FN1-204ENST00000356005 IGKV1-16P04430 117 aa9.08□□□□□ -0.96
FN1-204ENST00000356005 EDA2RQ9HAV5 297 aa9.08□□□□□ -0.96
FN1-204ENST00000356005 RNASE2P10153 161 aaKnown RBP9.08□□□□□ -0.96
FN1-204ENST00000356005 RPL23P62829 140 aaKnown RBP9.08□□□□□ -0.96
FN1-204ENST00000356005 FOXE3Q13461 319 aa9.08□□□□□ -0.96
FN1-204ENST00000356005 TMEM75Q8N9X5 138 aa9.08□□□□□ -0.96
FN1-204ENST00000356005 RNF126Q9BV68 326 aa9.08□□□□□ -0.96
FN1-204ENST00000356005 MBD3L1Q8WWY6 194 aa9.08□□□□□ -0.96
FN1-204ENST00000356005 XCL2Q9UBD3 114 aa9.08□□□□□ -0.96
FN1-204ENST00000356005 PAX4O43316 350 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 C8orf31Q8N9H6 132 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 SHANK2-AS3Q9BTD1 123 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 LINC00473A8K010 186 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 SHISA9B4DS77 424 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 TNFRSF6BO95407 300 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 HOXB4P17483 251 aaPredicted RBP9.07□□□□□ -0.96
FN1-204ENST00000356005 DMRTA1Q5VZB9 504 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 PUSL1Q8N0Z8 303 aaKnown RBP9.07□□□□□ -0.96
FN1-204ENST00000356005 PROK2Q9HC23 129 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 KLK5Q9Y337 293 aaPredicted RBP9.07□□□□□ -0.96
FN1-204ENST00000356005 CLDN16Q9Y5I7 305 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 IGKCP01834 107 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 RIPPLY3P57055 190 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 F8VVB4 439 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 F8VWA3 439 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 LDLRAD4O15165 306 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 LEPROTO15243 131 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 PAX2Q02962 417 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 TMEM14EPQ6UXP3 125 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 SHISA3A0PJX4 238 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 HOXD3P31249 432 aaPredicted RBP9.07□□□□□ -0.96
FN1-204ENST00000356005 IFITM3Q01628 133 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 VWC2Q2TAL6 325 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 MRAPQ8TCY5 172 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 LIME1Q9H400 295 aa9.07□□□□□ -0.96
FN1-204ENST00000356005 LAIR2Q6ISS4 152 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 LHFPL4Q7Z7J7 247 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 FAM120AOSQ5T036 256 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 PARD6GQ9BYG4 376 aaPredicted RBP9.06□□□□□ -0.96
FN1-204ENST00000356005 SH2D1AO60880 128 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 RNF152Q8N8N0 203 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 PRORYQ9H606 182 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 TRAV1-1A0A0B4J248 108 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 TCRAP04437 139 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 CD300CQ08708 224 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 C1orf159Q96HA4 380 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 MS4A6AQ9H2W1 248 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 NDUFA4L2Q9NRX3 87 aa9.06□□□□□ -0.96
FN1-204ENST00000356005 M0R2P5 195 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 THAP8Q8NA92 274 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 LRRK2Q5S007 2527 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 ADAMTS20P59510 1910 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 SPXQ9BT56 116 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 SPINK13Q1W4C9 94 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 NKAPP1Q8N9T2 125 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 IFI27L1Q96BM0 104 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 CSTL1Q9H114 145 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 TRAV3A0A0B4J244 114 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 AGMATQ9BSE5 352 aa9.05□□□□□ -0.96
FN1-204ENST00000356005 LOC102724200A0A096LPH7 203 aaPredicted RBP9.04□□□□□ -0.96
FN1-204ENST00000356005 IGHV2-70P01814 119 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 LOXP28300 417 aaPredicted RBP9.04□□□□□ -0.96
FN1-204ENST00000356005 DEFB112Q30KQ8 113 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 LY96Q9Y6Y9 160 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
FN1-204ENST00000356005 ATOH7Q8N100 152 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 OCC1Q8TAD7 63 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 MYMXA0A1B0GTQ4 84 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 IGKV1D-8A0A087WSZ0 117 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 TRAV5A0A0B4J249 113 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 MTURNQ8N3F0 131 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 TMEM243Q9BU79 118 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 DSCAML1Q8TD84 2053 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 PFN1P07737 140 aaKnown RBP9.04□□□□□ -0.96
FN1-204ENST00000356005 C10orf126Q8N4M7 172 aa9.04□□□□□ -0.96
FN1-204ENST00000356005 CARHSP1Q9Y2V2 147 aaKnown RBP9.04□□□□□ -0.96
FN1-204ENST00000356005 TRAV2A0A0B4J234 112 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 LSM4Q9Y4Z0 139 aaKnown RBP9.03□□□□□ -0.96
FN1-204ENST00000356005 IGHV7-4-1A0A0J9YVY3 117 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 IGKV1-5P01602 117 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 C17orf58Q2M2W7 97 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 PGPEP1LA6NFU8 196 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 KLF12Q9Y4X4 402 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 C15orf62A8K5M9 175 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 C8orf86Q6ZUL3 223 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 IGHV1OR15-1A0A075B7D0 117 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 FOXI2Q6ZQN5 318 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 GFRA4Q9GZZ7 299 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 CCL18P55774 89 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 OR11H6Q8NGC7 330 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 TMEM242Q9NWH2 141 aa9.03□□□□□ -0.96
FN1-204ENST00000356005 NIT1Q86X76 327 aa9.02□□□□□ -0.96
FN1-204ENST00000356005 C22orf46C9J442 243 aa9.02□□□□□ -0.97
FN1-204ENST00000356005 INS-IGF2F8WCM5 200 aa9.02□□□□□ -0.97
FN1-204ENST00000356005 QRFPP83859 136 aa9.02□□□□□ -0.97
FN1-204ENST00000356005 G3V318 75 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms