RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ZFP30Q9Y2G7 519 aa19.69■□□□□ 0.74
CLK2-201ENST00000355560 IGKV2-40A0A087WW87 121 aaPredicted RBP19.68■□□□□ 0.74
CLK2-201ENST00000355560 CHEK1O14757 476 aa19.68■□□□□ 0.74
CLK2-201ENST00000355560 IGKV2D-40P01614 121 aaPredicted RBP19.68■□□□□ 0.74
CLK2-201ENST00000355560 SLC35B1P78383 322 aa19.68■□□□□ 0.74
CLK2-201ENST00000355560 ARL6IP6Q8N6S5 226 aa19.68■□□□□ 0.74
CLK2-201ENST00000355560 TRAPPC1Q9Y5R8 145 aa19.68■□□□□ 0.74
CLK2-201ENST00000355560 C19orf71A6NCJ1 209 aa19.67■□□□□ 0.74
CLK2-201ENST00000355560 KRTAP1-1Q07627 177 aa19.67■□□□□ 0.74
CLK2-201ENST00000355560 SLC50A1Q9BRV3 221 aa19.67■□□□□ 0.74
CLK2-201ENST00000355560 SPINK4O60575 86 aa19.67■□□□□ 0.74
CLK2-201ENST00000355560 C16orf54Q6UWD8 224 aa19.67■□□□□ 0.74
CLK2-201ENST00000355560 P01737 135 aa19.66■□□□□ 0.74
CLK2-201ENST00000355560 RPLP1P05386 114 aaKnown RBP19.66■□□□□ 0.74
CLK2-201ENST00000355560 GBGT1Q8N5D6 347 aa19.66■□□□□ 0.74
CLK2-201ENST00000355560 GLMPQ8WWB7 406 aa19.66■□□□□ 0.74
CLK2-201ENST00000355560 DAZAP1Q96EP5 407 aaKnown RBP19.66■□□□□ 0.74
CLK2-201ENST00000355560 RPP21Q9H633 154 aaKnown RBP19.66■□□□□ 0.74
CLK2-201ENST00000355560 ZNF705FA8MVS1 300 aaPredicted RBP19.66■□□□□ 0.74
CLK2-201ENST00000355560 ZC2HC1AQ96GY0 325 aa19.66■□□□□ 0.74
CLK2-201ENST00000355560 CBLN1P23435 193 aa19.65■□□□□ 0.74
CLK2-201ENST00000355560 SMUG1Q53HV7 270 aa19.65■□□□□ 0.74
CLK2-201ENST00000355560 RNF182Q8N6D2 247 aa19.65■□□□□ 0.74
CLK2-201ENST00000355560 TSKUQ8WUA8 353 aa19.65■□□□□ 0.74
CLK2-201ENST00000355560 CD5LO43866 347 aa19.64■□□□□ 0.74
CLK2-201ENST00000355560 FRMD6-AS1P0C7T7 363 aa19.64■□□□□ 0.74
CLK2-201ENST00000355560 MEOX2P50222 304 aa19.64■□□□□ 0.74
CLK2-201ENST00000355560 RPL19P84098 196 aaKnown RBP19.64■□□□□ 0.74
CLK2-201ENST00000355560 LCN12Q6JVE5 192 aa19.64■□□□□ 0.74
CLK2-201ENST00000355560 C8orf86Q6ZUL3 223 aa19.64■□□□□ 0.74
CLK2-201ENST00000355560 FASNP49327 2511 aaKnown RBP19.64■□□□□ 0.73
CLK2-201ENST00000355560 FOXE3Q13461 319 aa19.64■□□□□ 0.73
CLK2-201ENST00000355560 HECTD1Q9ULT8 2610 aa19.64■□□□□ 0.73
CLK2-201ENST00000355560 ELANEP08246 267 aa19.63■□□□□ 0.73
CLK2-201ENST00000355560 NEU1Q99519 415 aa19.63■□□□□ 0.73
CLK2-201ENST00000355560 IZUMO1RA6ND01 250 aa19.63■□□□□ 0.73
CLK2-201ENST00000355560 Q8N2B8 174 aa19.63■□□□□ 0.73
CLK2-201ENST00000355560 TMEM86BQ8N661 226 aa19.63■□□□□ 0.73
CLK2-201ENST00000355560 NAT8BQ9UHF3 227 aa19.63■□□□□ 0.73
CLK2-201ENST00000355560 ACANP16112 2415 aa19.63■□□□□ 0.73
CLK2-201ENST00000355560 HOXA5P20719 270 aa19.62■□□□□ 0.73
CLK2-201ENST00000355560 MRPL54Q6P161 138 aaKnown RBP19.62■□□□□ 0.73
CLK2-201ENST00000355560 C8orf49Q96NF6 230 aa19.62■□□□□ 0.73
CLK2-201ENST00000355560 DAZ1Q9NQZ3 744 aaKnown RBP19.62■□□□□ 0.73
CLK2-201ENST00000355560 YAE1D1Q9NRH1 226 aa19.62■□□□□ 0.73
CLK2-201ENST00000355560 CT83Q5H943 113 aa19.61■□□□□ 0.73
CLK2-201ENST00000355560 VGLL1Q99990 258 aa19.61■□□□□ 0.73
CLK2-201ENST00000355560 TRAV8-2A0A0B4J237 113 aa19.61■□□□□ 0.73
CLK2-201ENST00000355560 A0A1W2PS18 150 aa19.61■□□□□ 0.73
CLK2-201ENST00000355560 HIGD1CA8MV81 97 aa19.61■□□□□ 0.73
CLK2-201ENST00000355560 SNURFLB1AK76 121 aa19.61■□□□□ 0.73
CLK2-201ENST00000355560 NPIPB6E9PJ23 425 aa19.61■□□□□ 0.73
CLK2-201ENST00000355560 TM4SF20Q53R12 229 aa19.61■□□□□ 0.73
CLK2-201ENST00000355560 NUP35Q8NFH5 326 aa19.61■□□□□ 0.73
CLK2-201ENST00000355560 AKAP9Q99996 3911 aa19.61■□□□□ 0.73
CLK2-201ENST00000355560 FBLL1A6NHQ2 334 aaKnown RBP19.6■□□□□ 0.73
CLK2-201ENST00000355560 Q8TAT8 98 aa19.6■□□□□ 0.73
CLK2-201ENST00000355560 MYOZ3Q8TDC0 251 aa19.6■□□□□ 0.73
CLK2-201ENST00000355560 A8MWL6 223 aa19.6■□□□□ 0.73
CLK2-201ENST00000355560 FAM106AQ4KMX7 169 aa19.6■□□□□ 0.73
CLK2-201ENST00000355560 PRAC2D3DTV9 90 aa19.59■□□□□ 0.73
CLK2-201ENST00000355560 CT45A10P0DMU9 189 aa19.59■□□□□ 0.73
CLK2-201ENST00000355560 MYO9AB2RTY4 2548 aa19.59■□□□□ 0.73
CLK2-201ENST00000355560 IGHV7-4-1A0A0J9YVY3 117 aa19.58■□□□□ 0.73
CLK2-201ENST00000355560 DNAJC9-AS1A6NH13 148 aa19.58■□□□□ 0.73
CLK2-201ENST00000355560 GFI1BQ5VTD9 330 aa19.58■□□□□ 0.73
CLK2-201ENST00000355560 GPHB5Q86YW7 130 aa19.58■□□□□ 0.73
CLK2-201ENST00000355560 GNB1LQ9BYB4 327 aa19.58■□□□□ 0.73
CLK2-201ENST00000355560 MRPL18Q9H0U6 180 aaKnown RBP19.58■□□□□ 0.73
CLK2-201ENST00000355560 CDX1P47902 265 aaPredicted RBP19.58■□□□□ 0.72
CLK2-201ENST00000355560 TCF24Q7RTU0 167 aa19.58■□□□□ 0.72
CLK2-201ENST00000355560 OR4B1Q8NGF8 309 aa19.58■□□□□ 0.72
CLK2-201ENST00000355560 C16orf92Q96LL3 132 aa19.58■□□□□ 0.72
CLK2-201ENST00000355560 PRR25Q96S07 402 aa19.58■□□□□ 0.72
CLK2-201ENST00000355560 RHPN1-AS1Q9BWJ2 59 aa19.58■□□□□ 0.72
CLK2-201ENST00000355560 CRIP1P50238 77 aa19.57■□□□□ 0.72
CLK2-201ENST00000355560 SAPCD1Q5SSQ6 148 aa19.57■□□□□ 0.72
CLK2-201ENST00000355560 WDR73Q6P4I2 378 aa19.57■□□□□ 0.72
CLK2-201ENST00000355560 OR2D3Q8NGH3 330 aa19.57■□□□□ 0.72
CLK2-201ENST00000355560 XKRY2A2RUG3 117 aa19.57■□□□□ 0.72
CLK2-201ENST00000355560 LGALS1P09382 135 aaKnown RBP19.57■□□□□ 0.72
CLK2-201ENST00000355560 RNF152Q8N8N0 203 aa19.57■□□□□ 0.72
CLK2-201ENST00000355560 GTSF1Q8WW33 167 aa19.57■□□□□ 0.72
CLK2-201ENST00000355560 UBE2E2Q96LR5 201 aa19.57■□□□□ 0.72
CLK2-201ENST00000355560 COX19Q49B96 90 aa19.56■□□□□ 0.72
CLK2-201ENST00000355560 MRPL53Q96EL3 112 aaKnown RBP19.56■□□□□ 0.72
CLK2-201ENST00000355560 FAM181BA6NEQ2 426 aa19.55■□□□□ 0.72
CLK2-201ENST00000355560 K7EMT4 169 aa19.55■□□□□ 0.72
CLK2-201ENST00000355560 MT-ND6P03923 174 aa19.55■□□□□ 0.72
CLK2-201ENST00000355560 RAB4BP61018 213 aa19.55■□□□□ 0.72
CLK2-201ENST00000355560 PDZD11Q5EBL8 140 aa19.55■□□□□ 0.72
CLK2-201ENST00000355560 TMEM136Q6ZRR5 245 aa19.55■□□□□ 0.72
CLK2-201ENST00000355560 RBAKDNA6NC62 111 aa19.55■□□□□ 0.72
CLK2-201ENST00000355560 ERCC8Q13216 396 aa19.55■□□□□ 0.72
CLK2-201ENST00000355560 GFRA4Q9GZZ7 299 aa19.55■□□□□ 0.72
CLK2-201ENST00000355560 EDN2P20800 178 aa19.54■□□□□ 0.72
CLK2-201ENST00000355560 RPL11P62913 178 aaKnown RBP19.54■□□□□ 0.72
CLK2-201ENST00000355560 KLHDC1Q8N7A1 406 aa19.54■□□□□ 0.72
CLK2-201ENST00000355560 GPR61Q9BZJ8 451 aa19.54■□□□□ 0.72
CLK2-201ENST00000355560 SMPXQ9UHP9 88 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms