RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 FOXF2Q12947 444 aa8.65□□□□□ -1.02
SND1-201ENST00000354725 LINC01545Q5VT33 79 aa8.65□□□□□ -1.02
SND1-201ENST00000354725 TREML4Q6UXN2 200 aa8.65□□□□□ -1.02
SND1-201ENST00000354725 SEM1Q6ZVN7 128 aa8.65□□□□□ -1.02
SND1-201ENST00000354725 NFE4Q86UQ8 179 aa8.65□□□□□ -1.02
SND1-201ENST00000354725 CACNA1BQ00975 2339 aa8.65□□□□□ -1.02
SND1-201ENST00000354725 ZNF462Q96JM2 2506 aa8.65□□□□□ -1.02
SND1-201ENST00000354725 IGHV1-24A0A0C4DH33 117 aa8.65□□□□□ -1.03
SND1-201ENST00000354725 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.03
SND1-201ENST00000354725 CCL24O00175 119 aa8.65□□□□□ -1.03
SND1-201ENST00000354725 MALP21145 153 aa8.65□□□□□ -1.03
SND1-201ENST00000354725 MPV17P39210 176 aa8.65□□□□□ -1.03
SND1-201ENST00000354725 LINC01620Q4KN68 170 aa8.65□□□□□ -1.03
SND1-201ENST00000354725 Q71RC1 249 aaPredicted RBP8.65□□□□□ -1.03
SND1-201ENST00000354725 UBALD1Q8TB05 177 aa8.65□□□□□ -1.03
SND1-201ENST00000354725 MGST2Q99735 147 aa8.65□□□□□ -1.03
SND1-201ENST00000354725 F11RQ9Y624 299 aaKnown RBP8.65□□□□□ -1.03
SND1-201ENST00000354725 CNTRLQ7Z7A1 2325 aa8.65□□□□□ -1.03
SND1-201ENST00000354725 CSN3P07498 182 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 DEFA4P12838 97 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 ZNF816Q0VGE8 651 aaPredicted RBP8.64□□□□□ -1.03
SND1-201ENST00000354725 IBA57Q5T440 356 aaKnown RBP8.64□□□□□ -1.03
SND1-201ENST00000354725 AMTNQ6UX39 209 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 DNAJC13O75165 2243 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 DCHS2Q6V1P9 2916 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 FAM208BQ5VWN6 2430 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 RRHO14718 337 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 LOXL3P58215 753 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 KLF14Q8TD94 323 aaPredicted RBP8.64□□□□□ -1.03
SND1-201ENST00000354725 DOCK7Q96N67 2140 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 K7ERJ3 54 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 IGLV1-44P01699 117 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 RBP4P02753 201 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 CGB3P0DN86 165 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 CGB7P0DN87 165 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 AJUBAQ96IF1 538 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 FAM215AQ9Y5M1 114 aa8.64□□□□□ -1.03
SND1-201ENST00000354725 HRNRQ86YZ3 2850 aaPredicted RBP8.63□□□□□ -1.03
SND1-201ENST00000354725 FAM236AA0A1B0GUQ0 79 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 FAM236BA0A1B0GV22 79 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 C9JCJ5 164 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 WNT9BO14905 357 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 IGLL5B9A064 214 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 IGLC6P0CF74 106 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 FXYD2P54710 66 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 FAM57AQ8TBR7 257 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 DEFB127Q9H1M4 99 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 RAI1Q7Z5J4 1906 aaPredicted RBP8.63□□□□□ -1.03
SND1-201ENST00000354725 TEX22C9J3V5 150 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 LINC00205P59089 165 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 CD177Q8N6Q3 437 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 RASL10AQ92737 203 aa8.63□□□□□ -1.03
SND1-201ENST00000354725 HOXA4Q00056 320 aaPredicted RBP8.62□□□□□ -1.03
SND1-201ENST00000354725 HES1Q14469 280 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 C1orf229Q6ZS94 237 aaPredicted RBP8.62□□□□□ -1.03
SND1-201ENST00000354725 Q6ZT83 130 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 PRADC1Q9BSG0 188 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 CXXC4Q9H2H0 198 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 TRGV5A0A0B4J1U4 118 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 SPINT2O43291 252 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 SPRY3O43610 288 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 OR5AL1P0C617 328 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 MYOD1P15172 320 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 GCSHP23434 173 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 LINC01587Q99440 93 aa8.62□□□□□ -1.03
SND1-201ENST00000354725 NPFFO15130 113 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 FAM106CPP0CH98 169 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 PRR20EP86478 221 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 PRR20CP86479 221 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 PRR20DP86480 221 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 PRR20BP86481 221 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 PRR20AP86496 221 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 SRSF9Q13242 221 aaKnown RBP eCLIP8.61□□□□□ -1.03
SND1-201ENST00000354725 FAM106AQ4KMX7 169 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 CHCHD1Q96BP2 118 aaKnown RBP8.61□□□□□ -1.03
SND1-201ENST00000354725 IFI27L2Q9H2X8 130 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 YTHDF2Q9Y5A9 579 aaKnown RBP8.61□□□□□ -1.03
SND1-201ENST00000354725 IZUMO1RA6ND01 250 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 ARL14EPLP0DKL9 152 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 RTL8BQ17RB0 113 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 CSMD2Q7Z408 3487 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 SMIM27A0A1W2PRY6 76 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 FXYD3Q14802 87 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 BCL6BQ8N143 479 aaPredicted RBP8.61□□□□□ -1.03
SND1-201ENST00000354725 TMEM14BQ9NUH8 114 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 FZR1Q9UM11 496 aa8.61□□□□□ -1.03
SND1-201ENST00000354725 CSN1S1P47710 185 aa8.6□□□□□ -1.03
SND1-201ENST00000354725 ZNF134P52741 427 aa8.6□□□□□ -1.03
SND1-201ENST00000354725 RPL31P62899 125 aaKnown RBP8.6□□□□□ -1.03
SND1-201ENST00000354725 ZNF826PQ6ZT77 177 aa8.6□□□□□ -1.03
SND1-201ENST00000354725 RPRMLQ8N4K4 120 aa8.6□□□□□ -1.03
SND1-201ENST00000354725 C11orf45Q8TAV5 145 aa8.6□□□□□ -1.03
SND1-201ENST00000354725 LINC00574Q9H8X3 128 aa8.6□□□□□ -1.03
SND1-201ENST00000354725 OSTCQ9NRP0 149 aa8.6□□□□□ -1.03
SND1-201ENST00000354725 FBN2P35556 2912 aa8.6□□□□□ -1.03
SND1-201ENST00000354725 CHEK1O14757 476 aa8.6□□□□□ -1.03
SND1-201ENST00000354725 PLGLB1Q02325 96 aa8.6□□□□□ -1.03
SND1-201ENST00000354725 GDF5OSQ5U4N7 250 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms