RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CFHR4Q92496 578 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 NDFIP1Q9BT67 221 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 ST20Q9HBF5 79 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 INSIG2Q9Y5U4 225 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 TOX4O94842 621 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 AVPP01185 164 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 LGALS7P47929 136 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 PLP1P60201 277 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 EXOC3-AS1Q8N2X6 119 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 C22orf15Q8WYQ4 148 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 CUBNO60494 3623 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 SONP18583 2426 aaKnown RBP6.75□□□□□ -1.33
TRIM55-204ENST00000353317 ZNF785A8K8V0 405 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 CHEK1O14757 476 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 PSG1P11464 419 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 HTR1DP28221 377 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 RPL27AP46776 148 aaKnown RBP6.75□□□□□ -1.33
TRIM55-204ENST00000353317 RBX1P62877 108 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 ERASQ7Z444 233 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 Q86TA4 180 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 RPEQ96AT9 228 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 DPM3Q9P2X0 92 aa6.75□□□□□ -1.33
TRIM55-204ENST00000353317 CENPVL3A0A0U1RRI6 287 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 FAM231BA6NCW3 169 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 CRYGBP07316 175 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 PRB4P10163 310 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-204ENST00000353317 LYZP61626 148 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 PAX8Q06710 450 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 GOLT1AQ6ZVE7 132 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 PRNTQ86SH4 94 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 TEX45Q8NA69 505 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 ASCL2Q99929 193 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 HIGD1AQ9Y241 93 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 H0Y8G0 127 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 HAX1O00165 279 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 NDUFS8O00217 210 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 NUDT3O95989 172 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 IGLC1P0CG04 106 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 SLC25A39Q9BZJ4 359 aaPredicted RBP6.74□□□□□ -1.33
TRIM55-204ENST00000353317 OTORQ9NRC9 128 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 SIGLEC9Q9Y336 463 aa6.74□□□□□ -1.33
TRIM55-204ENST00000353317 F11RQ9Y624 299 aaKnown RBP6.74□□□□□ -1.33
TRIM55-204ENST00000353317 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.73□□□□□ -1.33
TRIM55-204ENST00000353317 TEX22C9J3V5 150 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 K7EP13 123 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 CSN3P07498 182 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 BVES-AS1Q5T3Y7 98 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 SLC25A34Q6PIV7 304 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 C16orf54Q6UWD8 224 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 PMCHL2Q9BQD1 86 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 TMUB1Q9BVT8 246 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 MAP1LC3CQ9BXW4 147 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 TMEM191AQ9H0A3 160 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 SCRT2Q9NQ03 307 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 NOTCH2Q04721 2471 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 TAX1BP3O14907 124 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 ARMS2P0C7Q2 107 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 IGHV4-38-2P0DP08 117 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 SAA4P35542 130 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 BRD3OSQ6XYD6 125 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 PPP1R27Q86WC6 154 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 ZC2HC1AQ96GY0 325 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 C17orf77Q96MU5 243 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 FBXL15Q9H469 300 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 TIMM8BQ9Y5J9 83 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-204ENST00000353317 MYO9AB2RTY4 2548 aa6.73□□□□□ -1.33
TRIM55-204ENST00000353317 OR5AL1P0C617 328 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 VAMP3Q15836 100 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 DEFB113Q30KQ7 82 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 PET117Q6UWS5 81 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 OR4C5Q8NGB2 326 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 TMEM14CQ9P0S9 112 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 MUC21A0A0G2JKD1 596 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 MUC21A0A140T8X8 626 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 HSBP1L1C9JCN9 74 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 RNF223E7ERA6 249 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 I3L2K1 104 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 UBE2E1P51965 193 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 MUC21Q5SSG8 566 aa6.72□□□□□ -1.33
TRIM55-204ENST00000353317 SRSF12Q8WXF0 261 aaKnown RBP6.72□□□□□ -1.33
TRIM55-204ENST00000353317 IGKV1-17P01599 117 aa6.71□□□□□ -1.33
TRIM55-204ENST00000353317 MSMBP08118 114 aa6.71□□□□□ -1.33
TRIM55-204ENST00000353317 FOXE3Q13461 319 aa6.71□□□□□ -1.33
TRIM55-204ENST00000353317 KLF17Q5JT82 389 aaPredicted RBP6.71□□□□□ -1.33
TRIM55-204ENST00000353317 DEFB125Q8N687 156 aa6.71□□□□□ -1.33
TRIM55-204ENST00000353317 RASL11BQ9BPW5 248 aa6.71□□□□□ -1.33
TRIM55-204ENST00000353317 HSPB8Q9UJY1 196 aa6.71□□□□□ -1.33
TRIM55-204ENST00000353317 TRAV30A0A087WSZ9 112 aa6.71□□□□□ -1.34
TRIM55-204ENST00000353317 A0A087X0K7 114 aa6.71□□□□□ -1.34
TRIM55-204ENST00000353317 OR2T8A6NH00 312 aa6.71□□□□□ -1.34
TRIM55-204ENST00000353317 CRIP1P50238 77 aa6.71□□□□□ -1.34
TRIM55-204ENST00000353317 RHOGP84095 191 aa6.71□□□□□ -1.34
TRIM55-204ENST00000353317 LINC01545Q5VT33 79 aa6.71□□□□□ -1.34
TRIM55-204ENST00000353317 AP5S1Q9NUS5 200 aa6.71□□□□□ -1.34
TRIM55-204ENST00000353317 HIF1ANQ9NWT6 349 aa6.71□□□□□ -1.34
TRIM55-204ENST00000353317 TRBV19A0A075B6N1 114 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 TRAV40A0A0B4J280 105 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 HLA-DRB1P01911 266 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms