RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 SPINK8P0C7L1 97 aa11.2□□□□□ -0.62
RLIM-202ENST00000349225 RRN3P1Q2M238 152 aa11.2□□□□□ -0.62
RLIM-202ENST00000349225 MORN3Q6PF18 240 aaPredicted RBP11.2□□□□□ -0.62
RLIM-202ENST00000349225 APOMO95445 188 aa11.2□□□□□ -0.62
RLIM-202ENST00000349225 PSMG3-AS1Q96PY0 264 aa11.2□□□□□ -0.62
RLIM-202ENST00000349225 TMEM14CQ9P0S9 112 aa11.2□□□□□ -0.62
RLIM-202ENST00000349225 PLCE1Q9P212 2302 aa11.2□□□□□ -0.62
RLIM-202ENST00000349225 C5orf64Q2M2E5 130 aa11.19□□□□□ -0.62
RLIM-202ENST00000349225 FAM169BQ8N8A8 192 aa11.19□□□□□ -0.62
RLIM-202ENST00000349225 SS18L2Q9UHA2 77 aa11.19□□□□□ -0.62
RLIM-202ENST00000349225 TRAV40A0A0B4J280 105 aa11.19□□□□□ -0.62
RLIM-202ENST00000349225 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
RLIM-202ENST00000349225 Q6AWC8 147 aa11.19□□□□□ -0.62
RLIM-202ENST00000349225 OR4C13Q8NGP0 309 aa11.19□□□□□ -0.62
RLIM-202ENST00000349225 FOXC2Q99958 501 aa11.19□□□□□ -0.62
RLIM-202ENST00000349225 TACC2O95359 2948 aa11.19□□□□□ -0.62
RLIM-202ENST00000349225 LINC01546A6NGU7 62 aa11.19□□□□□ -0.62
RLIM-202ENST00000349225 SRSF1Q07955 248 aaKnown RBP eCLIP11.19□□□□□ -0.62
RLIM-202ENST00000349225 OR10X1Q8NGY0 326 aa11.19□□□□□ -0.62
RLIM-202ENST00000349225 SH2D1AO60880 128 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 CFIP05156 583 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 KLF17Q5JT82 389 aaPredicted RBP11.18□□□□□ -0.62
RLIM-202ENST00000349225 Q6ZUT4 128 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 MRPS17Q9Y2R5 130 aaKnown RBP11.18□□□□□ -0.62
RLIM-202ENST00000349225 TRBV7-3A0A075B6L6 115 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 SHISA9B4DS77 424 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 PRSS1P07477 247 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 CNTFRP26992 372 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 CFAP126Q5VTH2 177 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 TNFRSF13BO14836 293 aaPredicted RBP11.18□□□□□ -0.62
RLIM-202ENST00000349225 PTH2Q96A98 100 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 SPRY4Q9C004 299 aa11.18□□□□□ -0.62
RLIM-202ENST00000349225 TMEM160Q9NX00 188 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 MRPL35Q9NZE8 188 aaKnown RBP11.17□□□□□ -0.62
RLIM-202ENST00000349225 DKK4Q9UBT3 224 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 CACNA1GO43497 2377 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 IGHV3-72A0A0B4J1Y9 119 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 EGR2P11161 476 aaPredicted RBP11.17□□□□□ -0.62
RLIM-202ENST00000349225 FCER1GP30273 86 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 CXCL12P48061 93 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 RAB9BQ9NP90 201 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 CTSZQ9UBR2 303 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 A0A1W2PNU3 283 aaPredicted RBP11.17□□□□□ -0.62
RLIM-202ENST00000349225 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
RLIM-202ENST00000349225 ZNF80P51504 273 aaPredicted RBP11.17□□□□□ -0.62
RLIM-202ENST00000349225 KLRD1Q13241 179 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 TWIST1Q15672 202 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 CARD19Q96LW7 228 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 ZNF576Q9H609 170 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 NGBQ9NPG2 151 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 PGPEP1Q9NXJ5 209 aa11.17□□□□□ -0.62
RLIM-202ENST00000349225 RBP4P02753 201 aa11.16□□□□□ -0.62
RLIM-202ENST00000349225 C9orf106Q8NAJ2 232 aa11.16□□□□□ -0.62
RLIM-202ENST00000349225 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
RLIM-202ENST00000349225 MZT1Q08AG7 82 aa11.16□□□□□ -0.62
RLIM-202ENST00000349225 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
RLIM-202ENST00000349225 KLRC4-KLRK1H3BQV0 150 aa11.15□□□□□ -0.62
RLIM-202ENST00000349225 IGKV1-17P01599 117 aa11.15□□□□□ -0.62
RLIM-202ENST00000349225 DPM2O94777 84 aa11.15□□□□□ -0.62
RLIM-202ENST00000349225 THBDP07204 575 aa11.15□□□□□ -0.62
RLIM-202ENST00000349225 IGFBP4P22692 258 aa11.15□□□□□ -0.62
RLIM-202ENST00000349225 LAMA5O15230 3695 aa11.15□□□□□ -0.62
RLIM-202ENST00000349225 HIST1H4GQ99525 98 aa11.15□□□□□ -0.63
RLIM-202ENST00000349225 CYSLTR1Q9Y271 337 aa11.15□□□□□ -0.63
RLIM-202ENST00000349225 TM4SF5O14894 197 aa11.14□□□□□ -0.63
RLIM-202ENST00000349225 SFTA2Q6UW10 78 aa11.14□□□□□ -0.63
RLIM-202ENST00000349225 HLA-DRB4P13762 266 aa11.14□□□□□ -0.63
RLIM-202ENST00000349225 CCL11P51671 97 aa11.14□□□□□ -0.63
RLIM-202ENST00000349225 ATP1A1-AS1Q5TC04 95 aa11.14□□□□□ -0.63
RLIM-202ENST00000349225 RNF7Q9UBF6 113 aa11.14□□□□□ -0.63
RLIM-202ENST00000349225 HLA-DRB4X5D2U9 266 aa11.14□□□□□ -0.63
RLIM-202ENST00000349225 IGLV2-18A0A075B6J9 118 aa11.14□□□□□ -0.63
RLIM-202ENST00000349225 OR11H12B2RN74 326 aa11.13□□□□□ -0.63
RLIM-202ENST00000349225 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
RLIM-202ENST00000349225 IGLC6P0CF74 106 aa11.13□□□□□ -0.63
RLIM-202ENST00000349225 WT1P19544 449 aaPredicted RBP11.13□□□□□ -0.63
RLIM-202ENST00000349225 PMS2CLQ68D20 193 aa11.13□□□□□ -0.63
RLIM-202ENST00000349225 ZFP2Q6ZN57 461 aa11.13□□□□□ -0.63
RLIM-202ENST00000349225 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
RLIM-202ENST00000349225 OR11H2Q8NH07 326 aa11.13□□□□□ -0.63
RLIM-202ENST00000349225 SHANK2-AS3Q9BTD1 123 aa11.13□□□□□ -0.63
RLIM-202ENST00000349225 IGKV2-40A0A087WW87 121 aaPredicted RBP11.13□□□□□ -0.63
RLIM-202ENST00000349225 IGKV2D-40P01614 121 aaPredicted RBP11.13□□□□□ -0.63
RLIM-202ENST00000349225 TAL2Q16559 108 aa11.13□□□□□ -0.63
RLIM-202ENST00000349225 MAP1LC3AQ9H492 121 aa11.13□□□□□ -0.63
RLIM-202ENST00000349225 H3BRN7 92 aa11.12□□□□□ -0.63
RLIM-202ENST00000349225 TMEM200BQ69YZ2 307 aa11.12□□□□□ -0.63
RLIM-202ENST00000349225 MALRD1Q5VYJ5 2156 aa11.12□□□□□ -0.63
RLIM-202ENST00000349225 TEX22C9J3V5 150 aa11.12□□□□□ -0.63
RLIM-202ENST00000349225 GATA4P43694 442 aa11.12□□□□□ -0.63
RLIM-202ENST00000349225 DLX1P56177 255 aa11.12□□□□□ -0.63
RLIM-202ENST00000349225 SRSF6Q13247 344 aaKnown RBP11.12□□□□□ -0.63
RLIM-202ENST00000349225 C1orf162Q8NEQ5 155 aaPredicted RBP11.12□□□□□ -0.63
RLIM-202ENST00000349225 Q8TAT8 98 aa11.12□□□□□ -0.63
RLIM-202ENST00000349225 SLC25A15Q9Y619 301 aa11.12□□□□□ -0.63
RLIM-202ENST00000349225 I3L2K1 104 aa11.12□□□□□ -0.63
RLIM-202ENST00000349225 PRSS29PA6NIE9 313 aa11.11□□□□□ -0.63
RLIM-202ENST00000349225 K7EM74 188 aa11.11□□□□□ -0.63
RLIM-202ENST00000349225 NHLRC4P0CG21 123 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms