RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 COX8AP10176 69 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 BRWD1-AS2P59051 145 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 TRAV21A0A0B4J279 112 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 MSMBP08118 114 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 COX6CP09669 75 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 MORN5Q5VZ52 161 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 ZC2HC1AQ96GY0 325 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 SELENOKQ9Y6D0 94 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 LRP4O75096 1905 aa11.75□□□□□ -0.53
NUP50-201ENST00000347635 H3BRN7 92 aa11.75□□□□□ -0.53
NUP50-201ENST00000347635 J3QLI3 93 aa11.75□□□□□ -0.53
NUP50-201ENST00000347635 UBE2E1P51965 193 aa11.75□□□□□ -0.53
NUP50-201ENST00000347635 KAAG1Q9UBP8 84 aa11.75□□□□□ -0.53
NUP50-201ENST00000347635 BVES-AS1Q5T3Y7 98 aa11.75□□□□□ -0.53
NUP50-201ENST00000347635 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
NUP50-201ENST00000347635 TMEM158Q8WZ71 300 aa11.75□□□□□ -0.53
NUP50-201ENST00000347635 TRAV41A0A0B4J266 112 aa11.75□□□□□ -0.53
NUP50-201ENST00000347635 FRMD6-AS1P0C7T7 363 aa11.75□□□□□ -0.53
NUP50-201ENST00000347635 HEATR1Q9H583 2144 aaKnown RBP11.75□□□□□ -0.53
NUP50-201ENST00000347635 HOXA3O43365 443 aaPredicted RBP11.74□□□□□ -0.53
NUP50-201ENST00000347635 APOMO95445 188 aa11.74□□□□□ -0.53
NUP50-201ENST00000347635 ICE1Q9Y2F5 2266 aa11.74□□□□□ -0.53
NUP50-201ENST00000347635 NPIPB6E9PJ23 425 aa11.74□□□□□ -0.53
NUP50-201ENST00000347635 IGLC1P0CG04 106 aa11.74□□□□□ -0.53
NUP50-201ENST00000347635 C8orf31Q8N9H6 132 aa11.74□□□□□ -0.53
NUP50-201ENST00000347635 BEX4Q9NWD9 120 aaPredicted RBP11.74□□□□□ -0.53
NUP50-201ENST00000347635 INTS1Q8N201 2190 aaKnown RBP11.74□□□□□ -0.53
NUP50-201ENST00000347635 H3BRM9 83 aa11.73□□□□□ -0.53
NUP50-201ENST00000347635 EIF4EBP1Q13541 118 aaPredicted RBP11.73□□□□□ -0.53
NUP50-201ENST00000347635 PAPPA-AS1Q5QFB9 102 aa11.73□□□□□ -0.53
NUP50-201ENST00000347635 PLNP26678 52 aa11.73□□□□□ -0.53
NUP50-201ENST00000347635 FAM167A-AS1Q96KT0 104 aa11.73□□□□□ -0.53
NUP50-201ENST00000347635 CHAC1Q9BUX1 264 aa11.73□□□□□ -0.53
NUP50-201ENST00000347635 TNFRSF6BO95407 300 aa11.73□□□□□ -0.53
NUP50-201ENST00000347635 PRSS2P07478 247 aa11.73□□□□□ -0.53
NUP50-201ENST00000347635 MTURNQ8N3F0 131 aa11.73□□□□□ -0.53
NUP50-201ENST00000347635 Q6ZVH6 145 aa11.73□□□□□ -0.53
NUP50-201ENST00000347635 SIGMAR1Q99720 223 aa11.73□□□□□ -0.53
NUP50-201ENST00000347635 ZNF815PA8K554 130 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 IGKV3-20P01619 116 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 LGALS9BQ3B8N2 356 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 MRPL51Q4U2R6 128 aaKnown RBP11.72□□□□□ -0.53
NUP50-201ENST00000347635 LGALS9CQ6DKI2 356 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 PATE2Q6UY27 113 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 IGKV1OR2-108A0A075B7D4 117 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 SHISA9B4DS77 424 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 PAX8Q06710 450 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 Q5PR19 223 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 ZC2HC1BQ5TFG8 222 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 DOCK7Q96N67 2140 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 SIGLEC8Q9NYZ4 499 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 ERCC8Q13216 396 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 GLMPQ8WWB7 406 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 CYSLTR1Q9Y271 337 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 YLPM1P49750 1951 aaKnown RBP11.72□□□□□ -0.53
NUP50-201ENST00000347635 IGHV2-70DA0A0C4DH43 119 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 C9orf118A6NHY6 69 aa11.72□□□□□ -0.53
NUP50-201ENST00000347635 GAGE13Q4V321 117 aa11.71□□□□□ -0.53
NUP50-201ENST00000347635 OVOL1O14753 267 aa11.71□□□□□ -0.53
NUP50-201ENST00000347635 CCL25O15444 150 aa11.71□□□□□ -0.53
NUP50-201ENST00000347635 IGHV3-11P01762 117 aa11.71□□□□□ -0.54
NUP50-201ENST00000347635 CR1LQ2VPA4 569 aa11.71□□□□□ -0.54
NUP50-201ENST00000347635 H3BUX3 64 aa11.7□□□□□ -0.54
NUP50-201ENST00000347635 PRORYQ9H606 182 aa11.7□□□□□ -0.54
NUP50-201ENST00000347635 GP9P14770 177 aa11.7□□□□□ -0.54
NUP50-201ENST00000347635 DAZAP2Q15038 168 aaPredicted RBP11.7□□□□□ -0.54
NUP50-201ENST00000347635 USMG5Q96IX5 58 aa11.7□□□□□ -0.54
NUP50-201ENST00000347635 CMC4P56277 68 aaPredicted RBP11.7□□□□□ -0.54
NUP50-201ENST00000347635 ZNF562Q6V9R5 426 aa11.7□□□□□ -0.54
NUP50-201ENST00000347635 C1orf122Q6ZSJ8 110 aa11.7□□□□□ -0.54
NUP50-201ENST00000347635 LY6HO94772 140 aa11.7□□□□□ -0.54
NUP50-201ENST00000347635 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
NUP50-201ENST00000347635 H7C1H1 209 aa11.69□□□□□ -0.54
NUP50-201ENST00000347635 PSMB11A5LHX3 300 aa11.69□□□□□ -0.54
NUP50-201ENST00000347635 SFTA2Q6UW10 78 aa11.69□□□□□ -0.54
NUP50-201ENST00000347635 PRR25Q96S07 402 aa11.69□□□□□ -0.54
NUP50-201ENST00000347635 SAA4P35542 130 aa11.69□□□□□ -0.54
NUP50-201ENST00000347635 ZNF747Q9BV97 191 aa11.69□□□□□ -0.54
NUP50-201ENST00000347635 ZNF256Q9Y2P7 627 aaPredicted RBP11.69□□□□□ -0.54
NUP50-201ENST00000347635 SPOCK3Q9BQ16 436 aa11.69□□□□□ -0.54
NUP50-201ENST00000347635 TRBV7-1A0A0A6YYK4 115 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 PROP1O75360 226 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 VCX2Q9H322 139 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 IGHV1-69P01742 117 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 CD7P09564 240 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 PAX2Q02962 417 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 ZNF503Q96F45 646 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 SNCGO76070 127 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 C17orf77Q96MU5 243 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 CPAMD8Q8IZJ3 1885 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 NDUFB8O95169 186 aa11.68□□□□□ -0.54
NUP50-201ENST00000347635 FAM223BA6NKX1 122 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 C9orf139Q6ZV77 190 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 FAM223AQ8IWN6 122 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 CTSZQ9UBR2 303 aa11.67□□□□□ -0.54
NUP50-201ENST00000347635 CD300EQ496F6 205 aaPredicted RBP11.67□□□□□ -0.54
NUP50-201ENST00000347635 LINC00173Q6ZV60 143 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms