RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 TMEM167AQ8TBQ9 72 aa12.53□□□□□ -0.4
SRPK1-201ENST00000346162 MUC6Q6W4X9 2439 aa12.53□□□□□ -0.4
SRPK1-201ENST00000346162 ATXN8Q156A1 80 aa12.52□□□□□ -0.4
SRPK1-201ENST00000346162 THBDP07204 575 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 Q6ZR03 302 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 PCP2Q8IVA1 136 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 C11orf52Q96A22 123 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 DKK1O94907 266 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 LAGE3Q14657 143 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 PLA2G2CQ5R387 149 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 CLEC19AQ6UXS0 136 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 CEND1Q8N111 149 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 YLPM1P49750 1951 aaKnown RBP12.52□□□□□ -0.41
SRPK1-201ENST00000346162 KIAA1671Q9BY89 1806 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 IGKV1-39P01597 117 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 IGKV1D-39P04432 117 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 CT83Q5H943 113 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 LINC00173Q6ZV60 143 aa12.52□□□□□ -0.41
SRPK1-201ENST00000346162 FAM74A4Q5TZK3 123 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 FAM231DQ6ZW35 169 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 EXOC3-AS1Q8N2X6 119 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 SVIPQ8NHG7 77 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 C8orf46Q8TAG6 207 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 FAM168AQ92567 244 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 SCRT2Q9NQ03 307 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 GGTLC3B5MD39 225 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 C12orf74Q32Q52 190 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 TNRC6AQ8NDV7 1962 aaKnown RBP12.51□□□□□ -0.41
SRPK1-201ENST00000346162 KIF26AQ9ULI4 1882 aaPredicted RBP12.51□□□□□ -0.41
SRPK1-201ENST00000346162 NPIPB5A8MRT5 1133 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 DTX1Q86Y01 620 aa12.51□□□□□ -0.41
SRPK1-201ENST00000346162 CFHR2P36980 270 aa12.5□□□□□ -0.41
SRPK1-201ENST00000346162 COL4A3Q01955 1670 aa12.5□□□□□ -0.41
SRPK1-201ENST00000346162 IGKV1-16P04430 117 aa12.5□□□□□ -0.41
SRPK1-201ENST00000346162 ASIPP42127 132 aa12.5□□□□□ -0.41
SRPK1-201ENST00000346162 ZNF747Q9BV97 191 aa12.5□□□□□ -0.41
SRPK1-201ENST00000346162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.5□□□□□ -0.41
SRPK1-201ENST00000346162 SPG11Q96JI7 2443 aa12.5□□□□□ -0.41
SRPK1-201ENST00000346162 H7C1H1 209 aa12.5□□□□□ -0.41
SRPK1-201ENST00000346162 FOXI2Q6ZQN5 318 aa12.5□□□□□ -0.41
SRPK1-201ENST00000346162 C19orf54Q5BKX5 351 aa12.49□□□□□ -0.41
SRPK1-201ENST00000346162 RNF183Q96D59 192 aa12.49□□□□□ -0.41
SRPK1-201ENST00000346162 C7orf69Q9H7B7 122 aa12.49□□□□□ -0.41
SRPK1-201ENST00000346162 KLF5Q13887 457 aaPredicted RBP12.49□□□□□ -0.41
SRPK1-201ENST00000346162 GAGE2AQ6NT46 116 aa12.49□□□□□ -0.41
SRPK1-201ENST00000346162 IGHV1-3A0A0C4DH29 117 aa12.49□□□□□ -0.41
SRPK1-201ENST00000346162 WNT2P09544 360 aa12.49□□□□□ -0.41
SRPK1-201ENST00000346162 ZNF329Q86UD4 541 aa12.49□□□□□ -0.41
SRPK1-201ENST00000346162 SLC25A39Q9BZJ4 359 aaPredicted RBP12.49□□□□□ -0.41
SRPK1-201ENST00000346162 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
SRPK1-201ENST00000346162 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.49□□□□□ -0.41
SRPK1-201ENST00000346162 FRMD6-AS1P0C7T7 363 aa12.48□□□□□ -0.41
SRPK1-201ENST00000346162 ZNF492Q9P255 531 aa12.48□□□□□ -0.41
SRPK1-201ENST00000346162 LY6DQ14210 128 aa12.48□□□□□ -0.41
SRPK1-201ENST00000346162 LYPD6Q86Y78 171 aa12.48□□□□□ -0.41
SRPK1-201ENST00000346162 LYPD2Q6UXB3 125 aa12.48□□□□□ -0.41
SRPK1-201ENST00000346162 NCOA6Q14686 2063 aaPredicted RBP12.48□□□□□ -0.41
SRPK1-201ENST00000346162 MLANAQ16655 118 aa12.48□□□□□ -0.41
SRPK1-201ENST00000346162 CENPVQ7Z7K6 275 aaPredicted RBP12.48□□□□□ -0.41
SRPK1-201ENST00000346162 C15orf53Q8NAA6 179 aa12.48□□□□□ -0.41
SRPK1-201ENST00000346162 TCTEX1D4Q5JR98 221 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 SSC4DQ8WTU2 575 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 C2orf16Q68DN1 1984 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 IGLL5B9A064 214 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 PMVKQ15126 192 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 RRN3P1Q2M238 152 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 H3BMM0 161 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 M0R2P5 195 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 FAM159AQ6UWV7 190 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 UBE2WQ96B02 151 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 FAM208BQ5VWN6 2430 aa12.47□□□□□ -0.41
SRPK1-201ENST00000346162 IGKV3-20P01619 116 aa12.46□□□□□ -0.41
SRPK1-201ENST00000346162 IGHV3-11P01762 117 aa12.46□□□□□ -0.41
SRPK1-201ENST00000346162 RNASE2P10153 161 aaKnown RBP12.46□□□□□ -0.41
SRPK1-201ENST00000346162 ZNRD1Q9P1U0 126 aa12.46□□□□□ -0.41
SRPK1-201ENST00000346162 ACACBO00763 2458 aa12.46□□□□□ -0.42
SRPK1-201ENST00000346162 SNRPD3P62318 126 aaKnown RBP12.46□□□□□ -0.42
SRPK1-201ENST00000346162 DKK2Q9UBU2 259 aa12.46□□□□□ -0.42
SRPK1-201ENST00000346162 IGHV3-64A0A075B6Q5 118 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 SLC25A20O43772 301 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 KLRD1Q13241 179 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 SPATA12Q7Z6I5 190 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 DDB2Q92466 427 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 OR11H6Q8NGC7 330 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 SIGLEC8Q9NYZ4 499 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 TECTAO75443 2155 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 PMS2P5A8MQ11 134 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 TAL2Q16559 108 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 WIPF2Q8TF74 440 aaPredicted RBP12.45□□□□□ -0.42
SRPK1-201ENST00000346162 TRGV9Q99603 122 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 SIGLEC9Q9Y336 463 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 MED13Q9UHV7 2174 aa12.45□□□□□ -0.42
SRPK1-201ENST00000346162 COL4A4P53420 1690 aaPredicted RBP12.44□□□□□ -0.42
SRPK1-201ENST00000346162 TRAV8-3A0A0A6YYJ7 113 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 IGFL3Q6UXB1 125 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 RNF5Q99942 180 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 ARFGEF3Q5TH69 2177 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 TMEM213A2RRL7 107 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 CTRLP40313 264 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms