RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 OVOL3O00110 214 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 PEX7O00628 323 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 IFI27P40305 119 aaPredicted RBP9.42□□□□□ -0.9
RTN3-203ENST00000341307 ZGRF1Q86YA3 2104 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 ZBTB34Q8NCN2 500 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 PRSS3P2Q8NHM4 247 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 Q9UFV3 132 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 HELZ2Q9BYK8 2649 aaKnown RBP9.42□□□□□ -0.9
RTN3-203ENST00000341307 ZNF688P0C7X2 276 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 FXYD7P58549 80 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 SRSF1Q07955 248 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■□□□ 13.4
RTN3-203ENST00000341307 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
RTN3-203ENST00000341307 ZNF329Q86UD4 541 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 RPEQ96AT9 228 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 MAP1LC3AQ9H492 121 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
RTN3-203ENST00000341307 TRAV4A0A0B4J268 109 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 SRRM4A7MD48 611 aaKnown RBP9.41□□□□□ -0.9
RTN3-203ENST00000341307 FCN3O75636 299 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 IFITM1P13164 125 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 MEIG1Q5JSS6 88 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 MORN5Q5VZ52 161 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 MORN3Q6PF18 240 aaPredicted RBP9.41□□□□□ -0.9
RTN3-203ENST00000341307 GFRALQ6UXV0 394 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 SGK494Q96LW2 274 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 RAB9BQ9NP90 201 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 SPRY3O43610 288 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 CT83Q5H943 113 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 TEN1Q86WV5 123 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 OR9G1Q8NH87 305 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 RITA1Q96K30 269 aa9.41□□□□□ -0.9
RTN3-203ENST00000341307 HAX1O00165 279 aa9.4□□□□□ -0.9
RTN3-203ENST00000341307 WIPF1O43516 503 aa9.4□□□□□ -0.9
RTN3-203ENST00000341307 CRLF1O75462 422 aa9.4□□□□□ -0.9
RTN3-203ENST00000341307 KLRB1Q12918 225 aa9.4□□□□□ -0.9
RTN3-203ENST00000341307 FAM167A-AS1Q96KT0 104 aa9.4□□□□□ -0.9
RTN3-203ENST00000341307 VCX2Q9H322 139 aa9.4□□□□□ -0.9
RTN3-203ENST00000341307 HHLA3Q9XRX5 114 aa9.4□□□□□ -0.9
RTN3-203ENST00000341307 ICE1Q9Y2F5 2266 aa9.4□□□□□ -0.9
RTN3-203ENST00000341307 IGHV3OR15-7A0A075B7D8 119 aa9.4□□□□□ -0.91
RTN3-203ENST00000341307 WI2-2373I1.2A0A1W2PRP0 233 aa9.4□□□□□ -0.91
RTN3-203ENST00000341307 C19orf71A6NCJ1 209 aa9.4□□□□□ -0.91
RTN3-203ENST00000341307 MYOD1P15172 320 aa9.4□□□□□ -0.91
RTN3-203ENST00000341307 DUTP33316 252 aaKnown RBP9.4□□□□□ -0.91
RTN3-203ENST00000341307 GNG5P63218 68 aa9.4□□□□□ -0.91
RTN3-203ENST00000341307 SLC25A33Q9BSK2 321 aa9.4□□□□□ -0.91
RTN3-203ENST00000341307 DCTN5Q9BTE1 182 aa9.4□□□□□ -0.91
RTN3-203ENST00000341307 SLC25A2Q9BXI2 301 aa9.4□□□□□ -0.91
RTN3-203ENST00000341307 IGKV1OR2-108A0A075B7D4 117 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 C8orf88P0DMB2 117 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 UBE2L3P68036 154 aaKnown RBP9.39□□□□□ -0.91
RTN3-203ENST00000341307 TTC32Q5I0X7 151 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 FAM201AQ5SY85 155 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 CD177Q8N6Q3 437 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 ITLN1Q8WWA0 313 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 RASL10AQ92737 203 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 IFI27L1Q96BM0 104 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 COQ2Q96H96 371 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 MLST8Q9BVC4 326 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 GFRA4Q9GZZ7 299 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 TRAV3A0A0B4J244 114 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 PAX8Q06710 450 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 RND1Q92730 232 aa9.39□□□□□ -0.91
RTN3-203ENST00000341307 DLX4Q92988 240 aaPredicted RBP9.39□□□□□ -0.91
RTN3-203ENST00000341307 PCNX1Q96RV3 2341 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 C12orf77C9JDV5 145 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 NDUFS7O75251 213 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 P01737 135 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 EDDM3AQ14507 147 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 MOB3BQ86TA1 216 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 C3orf56Q8N813 242 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 RFESDQ8TAC1 157 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 FBXL15Q9H469 300 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 IGHV3-43A0A0B4J1X8 118 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 LOC389332A0A1B0GUA5 103 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 SMIM9A6NGZ8 99 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 IGHV3-13P01766 116 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 IGHV3-43DP0DP04 118 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 PYYP10082 97 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 GLRXP35754 106 aa9.38□□□□□ -0.91
RTN3-203ENST00000341307 TMEM30CPA0ZSE6 113 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 TMEM262E9PQX1 116 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 EVI2AP22794 236 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 CD40P25942 277 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 TMEM78Q5T7P6 136 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 VKORC1L1Q8N0U8 176 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 OR13A1Q8NGR1 328 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 TMEM158Q8WZ71 300 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 FAM234AQ9H0X4 552 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 ZMAT4Q9H898 229 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 IGKV1D-17A0A075B6S4 117 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 MOSP00540 346 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 HBDP02042 147 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 TAL2Q16559 108 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 WFDC3Q8IUB2 231 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 ZCCHC24Q8N2G6 241 aaKnown RBP9.37□□□□□ -0.91
RTN3-203ENST00000341307 MAPKAPK5-AS1Q8N8E1 139 aa9.37□□□□□ -0.91
RTN3-203ENST00000341307 TMEM126AQ9H061 195 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms