RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 C3orf79P0CE67 100 aa10.3□□□□□ -0.76
DNMT1-201ENST00000340748 LOXP28300 417 aaPredicted RBP10.3□□□□□ -0.76
DNMT1-201ENST00000340748 Q0VG73 95 aa10.3□□□□□ -0.76
DNMT1-201ENST00000340748 TRAV12-3A0A0B4J271 114 aa10.3□□□□□ -0.76
DNMT1-201ENST00000340748 FCN3O75636 299 aa10.3□□□□□ -0.76
DNMT1-201ENST00000340748 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
DNMT1-201ENST00000340748 FNDC4Q9H6D8 234 aaPredicted RBP10.3□□□□□ -0.76
DNMT1-201ENST00000340748 C19orf84I3L1E1 186 aa10.29□□□□□ -0.76
DNMT1-201ENST00000340748 CD300EQ496F6 205 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-201ENST00000340748 MORN3Q6PF18 240 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-201ENST00000340748 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
DNMT1-201ENST00000340748 LINC00469Q8N7U9 141 aa10.29□□□□□ -0.76
DNMT1-201ENST00000340748 ZNRD1Q9P1U0 126 aa10.29□□□□□ -0.76
DNMT1-201ENST00000340748 IGKV3D-20A0A0C4DH25 116 aa10.29□□□□□ -0.76
DNMT1-201ENST00000340748 SYS1-DBNDD2H3BUS1 97 aa10.29□□□□□ -0.76
DNMT1-201ENST00000340748 PRB4P10163 310 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-201ENST00000340748 TP53BP1Q12888 1972 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-201ENST00000340748 A0A1B0GUS0 222 aa10.29□□□□□ -0.76
DNMT1-201ENST00000340748 TMEM238C9JI98 176 aa10.29□□□□□ -0.76
DNMT1-201ENST00000340748 C9JQL5 133 aa10.29□□□□□ -0.76
DNMT1-201ENST00000340748 C10orf105Q8TEF2 133 aa10.29□□□□□ -0.76
DNMT1-201ENST00000340748 INSP01308 110 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 DEFB112Q30KQ8 113 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 ZNF876PQ49A33 203 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 RNF138Q8WVD3 245 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 CHCHD5Q9BSY4 110 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 PCP4P48539 62 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 RPL36AP83881 106 aaKnown RBP10.28□□□□□ -0.76
DNMT1-201ENST00000340748 Q8NFD4 153 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 RPL36ALQ969Q0 106 aaKnown RBP10.28□□□□□ -0.76
DNMT1-201ENST00000340748 ATP6V0E1O15342 81 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 PAX2Q02962 417 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 C10orf91Q5T1B1 145 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 IGHV2-5P01817 119 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 PYY3Q5JQD4 70 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 IGFL4Q6B9Z1 124 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 ZNF479Q96JC4 524 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 TMEM14CQ9P0S9 112 aa10.28□□□□□ -0.76
DNMT1-201ENST00000340748 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.27□□□□□ -0.76
DNMT1-201ENST00000340748 PFN1P07737 140 aaKnown RBP10.27□□□□□ -0.76
DNMT1-201ENST00000340748 C1QTNF4Q9BXJ3 329 aa10.27□□□□□ -0.76
DNMT1-201ENST00000340748 ZNF726P1Q15940 193 aa10.27□□□□□ -0.77
DNMT1-201ENST00000340748 CSTL1Q9H114 145 aa10.27□□□□□ -0.77
DNMT1-201ENST00000340748 TRBV19A0A075B6N1 114 aa10.27□□□□□ -0.77
DNMT1-201ENST00000340748 INAFM1C9JVW0 142 aa10.27□□□□□ -0.77
DNMT1-201ENST00000340748 SAMD5Q5TGI4 173 aa10.27□□□□□ -0.77
DNMT1-201ENST00000340748 TEX43Q6ZNM6 134 aa10.27□□□□□ -0.77
DNMT1-201ENST00000340748 CRPP02741 224 aa10.27□□□□□ -0.77
DNMT1-201ENST00000340748 GUSBP1Q15486 140 aa10.27□□□□□ -0.77
DNMT1-201ENST00000340748 OR2K2Q8NGT1 345 aa10.27□□□□□ -0.77
DNMT1-201ENST00000340748 LINC00479Q96M42 142 aa10.27□□□□□ -0.77
DNMT1-201ENST00000340748 DOCK9Q9BZ29 2069 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 MED12Q93074 2177 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 NDUFS6O75380 124 aaKnown RBP10.26□□□□□ -0.77
DNMT1-201ENST00000340748 ERCC8Q13216 396 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 LRRC75A-AS1Q8N1F1 130 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 C14orf178Q8N769 122 aaPredicted RBP10.26□□□□□ -0.77
DNMT1-201ENST00000340748 A0A1B0GV72 72 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 LINC01619G3V211 115 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 SLC25A20O43772 301 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 AMN1Q8IY45 258 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 C8orf31Q8N9H6 132 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 KAAG1Q9UBP8 84 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 HELZP42694 1942 aaKnown RBP10.26□□□□□ -0.77
DNMT1-201ENST00000340748 PRSS46E5RG02 174 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 OVOL3O00110 214 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 DUX4L9Q6RFH8 374 aaPredicted RBP10.26□□□□□ -0.77
DNMT1-201ENST00000340748 FAM231DQ6ZW35 169 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 WFDC11Q8NEX6 87 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 NCOR2Q9Y618 2525 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 WIPF3A6NGB9 483 aa10.26□□□□□ -0.77
DNMT1-201ENST00000340748 POU2AF1Q16633 256 aa10.25□□□□□ -0.77
DNMT1-201ENST00000340748 TMEM86BQ8N661 226 aa10.25□□□□□ -0.77
DNMT1-201ENST00000340748 TRGV1A0A0A0MS02 117 aa10.25□□□□□ -0.77
DNMT1-201ENST00000340748 ERG28Q9UKR5 140 aa10.25□□□□□ -0.77
DNMT1-201ENST00000340748 LSM4Q9Y4Z0 139 aaKnown RBP10.25□□□□□ -0.77
DNMT1-201ENST00000340748 THAP8Q8NA92 274 aa10.25□□□□□ -0.77
DNMT1-201ENST00000340748 H3BRN7 92 aa10.25□□□□□ -0.77
DNMT1-201ENST00000340748 RASL10AQ92737 203 aa10.25□□□□□ -0.77
DNMT1-201ENST00000340748 MPDZO75970 2070 aa10.25□□□□□ -0.77
DNMT1-201ENST00000340748 hDV102S1A0JD36 115 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 DKK1O94907 266 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 ARMS2P0C7Q2 107 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 KRTAP27-1Q3LI81 207 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 VPREB3Q9UKI3 123 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 TRAV8-2A0A0B4J237 113 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 M0R2P5 195 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 ZNF134P52741 427 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 PRR31Q5SQ13 230 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 BCL6BQ8N143 479 aaPredicted RBP10.24□□□□□ -0.77
DNMT1-201ENST00000340748 ROS1P08922 2347 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 IGHV4-59P01825 116 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 SYNJ2BPP57105 145 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 IL15RAQ13261 267 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 CACNA1DQ01668 2161 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 IGHV3-73A0A0B4J1V6 119 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 A8MWV9 139 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 TNFRSF6BO95407 300 aa10.24□□□□□ -0.77
DNMT1-201ENST00000340748 Q6ZSR3 168 aa10.23□□□□□ -0.77
DNMT1-201ENST00000340748 IGHV3-64A0A075B6Q5 118 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms