RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 BOD1L2Q8IYS8 172 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 ZNF503Q96F45 646 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 RITA1Q96K30 269 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 NABP2Q9BQ15 211 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 RAB9BQ9NP90 201 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 ITPR3Q14573 2671 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 AREGP15514 252 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 COX19Q49B96 90 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 LY6G5BQ8NDX9 201 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 DDB2Q92466 427 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 OSTCQ9NRP0 149 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 MRPL16Q9NX20 251 aaKnown RBP11.97□□□□□ -0.49
BRAT1-201ENST00000340611 CREBBPQ92793 2442 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 TRBV7-9A0A0J9YWB2 115 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 BRI3O95415 125 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 TSPAN13O95857 204 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 IGLV2-8P01709 118 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 ZNF137PP52743 207 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 C20orf78Q9BR46 151 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 HIF1ANQ9NWT6 349 aa11.97□□□□□ -0.49
BRAT1-201ENST00000340611 NAV3Q8IVL0 2385 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 IGHV3OR16-10A0A075B7F0 116 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 SRRM4A7MD48 611 aaKnown RBP11.96□□□□□ -0.49
BRAT1-201ENST00000340611 FSTL3O95633 263 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 SPINK8P0C7L1 97 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 PRR20EP86478 221 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 PRR20CP86479 221 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 PRR20DP86480 221 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 PRR20BP86481 221 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 PRR20AP86496 221 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 MLANAQ16655 118 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 OR9G1Q8NH87 305 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 C10orf105Q8TEF2 133 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 SPATA25Q9BR10 227 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 HSPB8Q9UJY1 196 aa11.96□□□□□ -0.49
BRAT1-201ENST00000340611 PDZD2O15018 2839 aa11.96□□□□□ -0.5
BRAT1-201ENST00000340611 SIVA1O15304 175 aa11.96□□□□□ -0.5
BRAT1-201ENST00000340611 PPIFP30405 207 aaKnown RBP11.96□□□□□ -0.5
BRAT1-201ENST00000340611 SPANXB1Q9NS25 103 aaPredicted RBP11.96□□□□□ -0.5
BRAT1-201ENST00000340611 ACANP16112 2415 aa11.95□□□□□ -0.5
BRAT1-201ENST00000340611 SMIM27A0A1W2PRY6 76 aa11.95□□□□□ -0.5
BRAT1-201ENST00000340611 ODF1Q14990 250 aa11.95□□□□□ -0.5
BRAT1-201ENST00000340611 NUP35Q8NFH5 326 aa11.95□□□□□ -0.5
BRAT1-201ENST00000340611 C18orf15Q96N68 181 aa11.95□□□□□ -0.5
BRAT1-201ENST00000340611 ENY2Q9NPA8 101 aa11.95□□□□□ -0.5
BRAT1-201ENST00000340611 CRXO43186 299 aaPredicted RBP11.95□□□□□ -0.5
BRAT1-201ENST00000340611 NCR2O95944 276 aa11.95□□□□□ -0.5
BRAT1-201ENST00000340611 RTL8BQ17RB0 113 aa11.95□□□□□ -0.5
BRAT1-201ENST00000340611 VMO1Q7Z5L0 202 aa11.95□□□□□ -0.5
BRAT1-201ENST00000340611 C8orf46Q8TAG6 207 aa11.95□□□□□ -0.5
BRAT1-201ENST00000340611 IGKV1OR2-108A0A075B7D4 117 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 ENSAO43768 121 aaKnown RBP11.94□□□□□ -0.5
BRAT1-201ENST00000340611 AMTNQ6UX39 209 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 ZNF833PQ6ZTB9 187 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 PIMREGQ9BSJ6 248 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 MS4A6AQ9H2W1 248 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 TMEM167BQ9NRX6 74 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 FLNAP21333 2647 aaKnown RBP11.94□□□□□ -0.5
BRAT1-201ENST00000340611 C15orf61A6NNL5 157 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 IGLV1-47P01700 117 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 GCSHP23434 173 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 HCP5Q6MZN7 132 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 SONP18583 2426 aaKnown RBP11.94□□□□□ -0.5
BRAT1-201ENST00000340611 MXRA5Q9NR99 2828 aa11.94□□□□□ -0.5
BRAT1-201ENST00000340611 TRAV5A0A0B4J249 113 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 MT-ATP8P03928 68 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 PSMG3-AS1Q96PY0 264 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 TMEM189A5PLL7 270 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 VWC2LB2RUY7 222 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 H3BMG7 143 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 CNTFRP26992 372 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 KLF5Q13887 457 aaPredicted RBP11.93□□□□□ -0.5
BRAT1-201ENST00000340611 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 UFC1Q9Y3C8 167 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 FAM90A9PA6NNJ1 464 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 SGK494Q96LW2 274 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 VGLL1Q99990 258 aa11.93□□□□□ -0.5
BRAT1-201ENST00000340611 BUB1B-PAK6H3BSN5 160 aa11.92□□□□□ -0.5
BRAT1-201ENST00000340611 NMUP48645 174 aa11.92□□□□□ -0.5
BRAT1-201ENST00000340611 HSPE1P61604 102 aaKnown RBP11.92□□□□□ -0.5
BRAT1-201ENST00000340611 IGF2BP2-AS1Q96M15 143 aa11.92□□□□□ -0.5
BRAT1-201ENST00000340611 HIGD1CA8MV81 97 aa11.92□□□□□ -0.5
BRAT1-201ENST00000340611 DYNAPQ8N1N2 210 aa11.92□□□□□ -0.5
BRAT1-201ENST00000340611 C1RLQ9NZP8 487 aa11.92□□□□□ -0.5
BRAT1-201ENST00000340611 ANAPC13Q9BS18 74 aa11.91□□□□□ -0.5
BRAT1-201ENST00000340611 TPSG1Q9NRR2 321 aa11.91□□□□□ -0.5
BRAT1-201ENST00000340611 SOX21Q9Y651 276 aaPredicted RBP11.91□□□□□ -0.5
BRAT1-201ENST00000340611 SMIM13P0DJ93 91 aa11.91□□□□□ -0.5
BRAT1-201ENST00000340611 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.91□□□□□ -0.5
BRAT1-201ENST00000340611 OR8A1Q8NGG7 326 aa11.91□□□□□ -0.5
BRAT1-201ENST00000340611 C8orf86Q6ZUL3 223 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 PCP2Q8IVA1 136 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 ZNF418Q8TF45 676 aaPredicted RBP11.9□□□□□ -0.5
BRAT1-201ENST00000340611 HARBI1Q96MB7 349 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 OR11H12B2RN74 326 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 FGF6P10767 208 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 HOXB4P17483 251 aaPredicted RBP11.9□□□□□ -0.5
BRAT1-201ENST00000340611 ID1P41134 155 aa11.9□□□□□ -0.5
BRAT1-201ENST00000340611 UBE2L3P68036 154 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms