RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 IGHV2-70DA0A0C4DH43 119 aa12.73□□□□□ -0.37
LITAF-201ENST00000339430 ARMS2P0C7Q2 107 aa12.73□□□□□ -0.37
LITAF-201ENST00000339430 ABCA2Q9BZC7 2435 aa12.73□□□□□ -0.37
LITAF-201ENST00000339430 APOHP02749 345 aaPredicted RBP12.72□□□□□ -0.37
LITAF-201ENST00000339430 ZNF138P52744 262 aa12.72□□□□□ -0.37
LITAF-201ENST00000339430 DEFB113Q30KQ7 82 aa12.72□□□□□ -0.37
LITAF-201ENST00000339430 LYPD1Q8N2G4 141 aa12.72□□□□□ -0.37
LITAF-201ENST00000339430 ZFP30Q9Y2G7 519 aa12.72□□□□□ -0.37
LITAF-201ENST00000339430 CELSR1Q9NYQ6 3014 aa12.72□□□□□ -0.37
LITAF-201ENST00000339430 IGHV7-81A0A0B4J1V7 117 aa12.72□□□□□ -0.37
LITAF-201ENST00000339430 EGR2P11161 476 aaPredicted RBP12.72□□□□□ -0.37
LITAF-201ENST00000339430 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
LITAF-201ENST00000339430 SIRPDQ9H106 197 aa12.72□□□□□ -0.37
LITAF-201ENST00000339430 AAMDCQ9H7C9 122 aa12.72□□□□□ -0.37
LITAF-201ENST00000339430 BEX4Q9NWD9 120 aaPredicted RBP12.72□□□□□ -0.37
LITAF-201ENST00000339430 LOC102724200A0A096LPH7 203 aaPredicted RBP12.71□□□□□ -0.37
LITAF-201ENST00000339430 TRBV6-1A0A0K0K1D8 114 aa12.71□□□□□ -0.37
LITAF-201ENST00000339430 FAM231BA6NCW3 169 aa12.71□□□□□ -0.37
LITAF-201ENST00000339430 G0S2P27469 103 aa12.71□□□□□ -0.37
LITAF-201ENST00000339430 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.37
LITAF-201ENST00000339430 C16orf54Q6UWD8 224 aa12.71□□□□□ -0.37
LITAF-201ENST00000339430 SPATA12Q7Z6I5 190 aa12.71□□□□□ -0.37
LITAF-201ENST00000339430 THYN1Q9P016 225 aa12.71□□□□□ -0.37
LITAF-201ENST00000339430 TMSB15BA0A087X1C1 80 aa12.71□□□□□ -0.38
LITAF-201ENST00000339430 C2orf70A6NJV1 201 aa12.71□□□□□ -0.38
LITAF-201ENST00000339430 HAX1O00165 279 aa12.71□□□□□ -0.38
LITAF-201ENST00000339430 BTF3P20290 206 aaKnown RBP12.71□□□□□ -0.38
LITAF-201ENST00000339430 MINOS1Q5TGZ0 78 aa12.71□□□□□ -0.38
LITAF-201ENST00000339430 MINOS1-NBL1R4GNA1 71 aa12.71□□□□□ -0.38
LITAF-201ENST00000339430 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
LITAF-201ENST00000339430 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
LITAF-201ENST00000339430 ECSCRQ19T08 205 aa12.7□□□□□ -0.38
LITAF-201ENST00000339430 Q8N9W7 124 aa12.7□□□□□ -0.38
LITAF-201ENST00000339430 TMUB1Q9BVT8 246 aa12.7□□□□□ -0.38
LITAF-201ENST00000339430 C1RLQ9NZP8 487 aa12.7□□□□□ -0.38
LITAF-201ENST00000339430 IGHV1-24A0A0C4DH33 117 aa12.7□□□□□ -0.38
LITAF-201ENST00000339430 A0A1B0GUT8 65 aa12.7□□□□□ -0.38
LITAF-201ENST00000339430 CSN3P07498 182 aa12.7□□□□□ -0.38
LITAF-201ENST00000339430 CTSGP08311 255 aa12.7□□□□□ -0.38
LITAF-201ENST00000339430 EBI3Q14213 229 aa12.7□□□□□ -0.38
LITAF-201ENST00000339430 LINC00173Q6ZV60 143 aa12.7□□□□□ -0.38
LITAF-201ENST00000339430 ZNF48Q96MX3 618 aaPredicted RBP12.7□□□□□ -0.38
LITAF-201ENST00000339430 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.69□□□□□ -0.38
LITAF-201ENST00000339430 OOSP1A8MZH6 123 aa12.69□□□□□ -0.38
LITAF-201ENST00000339430 IGLC3P0DOY3 106 aa12.69□□□□□ -0.38
LITAF-201ENST00000339430 SLC25A16P16260 332 aa12.69□□□□□ -0.38
LITAF-201ENST00000339430 HLA-DMBP28068 263 aa12.69□□□□□ -0.38
LITAF-201ENST00000339430 S100A7AQ86SG5 101 aa12.69□□□□□ -0.38
LITAF-201ENST00000339430 TXN2Q99757 166 aa12.69□□□□□ -0.38
LITAF-201ENST00000339430 TIMM8BQ9Y5J9 83 aaPredicted RBP12.69□□□□□ -0.38
LITAF-201ENST00000339430 UNC79Q9P2D8 2635 aa12.68□□□□□ -0.38
LITAF-201ENST00000339430 HECTD1Q9ULT8 2610 aa12.68□□□□□ -0.38
LITAF-201ENST00000339430 M0QZK8 103 aa12.68□□□□□ -0.38
LITAF-201ENST00000339430 FAM106CPP0CH98 169 aa12.68□□□□□ -0.38
LITAF-201ENST00000339430 CSN1S1P47710 185 aa12.68□□□□□ -0.38
LITAF-201ENST00000339430 PDE6HQ13956 83 aa12.68□□□□□ -0.38
LITAF-201ENST00000339430 NDFIP1Q9BT67 221 aa12.68□□□□□ -0.38
LITAF-201ENST00000339430 RPLP1P05386 114 aaKnown RBP12.67□□□□□ -0.38
LITAF-201ENST00000339430 LINC00614P0C842 121 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 CT45A10P0DMU9 189 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 GPR183P32249 361 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 SAA4P35542 130 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 UNQ5815/PRO19632Q6UWF5 114 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 Q6ZN92 141 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 LRRC75A-AS1Q8N1F1 130 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 UQCR10Q9UDW1 63 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 RABAC1Q9UI14 185 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 Q5PR19 223 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 Q8TAT8 98 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 AJUBAQ96IF1 538 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 SMAD5-AS1Q9Y6J3 95 aa12.67□□□□□ -0.38
LITAF-201ENST00000339430 MUC21A0A0G2JKD1 596 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 MUC21A0A140T8X8 626 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 ATP6V0E1O15342 81 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 RPL7P18124 248 aaKnown RBP12.66□□□□□ -0.38
LITAF-201ENST00000339430 RIGQ13278 110 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 C15orf32Q32M92 178 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 MUC21Q5SSG8 566 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 CHCHD1Q96BP2 118 aaKnown RBP12.66□□□□□ -0.38
LITAF-201ENST00000339430 TMEM70Q9BUB7 260 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 PSG9Q00887 426 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 FAM162BQ5T6X4 162 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 MAPK1IP1LQ8NDC0 245 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 ITPR2Q14571 2701 aa12.66□□□□□ -0.38
LITAF-201ENST00000339430 LINC01548A6NM66 108 aa12.65□□□□□ -0.38
LITAF-201ENST00000339430 SH2D1AO60880 128 aa12.65□□□□□ -0.38
LITAF-201ENST00000339430 LEPROTL1O95214 131 aa12.65□□□□□ -0.38
LITAF-201ENST00000339430 ZNF25P17030 456 aaPredicted RBP12.65□□□□□ -0.38
LITAF-201ENST00000339430 TFPI2P48307 235 aa12.65□□□□□ -0.38
LITAF-201ENST00000339430 UBE2E1P51965 193 aa12.65□□□□□ -0.38
LITAF-201ENST00000339430 HNRNPA3P51991 378 aaKnown RBP12.65□□□□□ -0.38
LITAF-201ENST00000339430 RELQ04864 619 aaPredicted RBP12.65□□□□□ -0.38
LITAF-201ENST00000339430 A0A096LNT2 108 aa12.65□□□□□ -0.38
LITAF-201ENST00000339430 G3V318 75 aa12.65□□□□□ -0.38
LITAF-201ENST00000339430 MSMBP08118 114 aa12.65□□□□□ -0.38
LITAF-201ENST00000339430 KLHDC1Q8N7A1 406 aa12.65□□□□□ -0.38
LITAF-201ENST00000339430 VGLL1Q99990 258 aa12.65□□□□□ -0.38
LITAF-201ENST00000339430 IGHV3-66A0A0C4DH42 116 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
LITAF-201ENST00000339430 H0Y8G0 127 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms