RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TGFAP01135 160 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 Q9UFV3 132 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 NDUFA3O95167 84 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 PRR30Q53SZ7 412 aaPredicted RBP11.23□□□□□ -0.61
PCDH8-201ENST00000338862 WIPF2Q8TF74 440 aaPredicted RBP11.23□□□□□ -0.61
PCDH8-201ENST00000338862 NEU4Q8WWR8 484 aaPredicted RBP11.23□□□□□ -0.61
PCDH8-201ENST00000338862 ABHD17AQ96GS6 310 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 IGHV3OR16-10A0A075B7F0 116 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 SH2D1AO60880 128 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 LTAP01374 205 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 CD3EP07766 207 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 GP9P14770 177 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 S100A4P26447 101 aaKnown RBP11.23□□□□□ -0.61
PCDH8-201ENST00000338862 DEFB125Q8N687 156 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 FER1L6-AS1Q8NA97 138 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 ZNF747Q9BV97 191 aa11.23□□□□□ -0.61
PCDH8-201ENST00000338862 CD5LO43866 347 aa11.22□□□□□ -0.61
PCDH8-201ENST00000338862 SPTBN4Q9H254 2564 aa11.22□□□□□ -0.61
PCDH8-201ENST00000338862 ITGB1BP1O14713 200 aa11.22□□□□□ -0.61
PCDH8-201ENST00000338862 IGLC1P0CG04 106 aa11.22□□□□□ -0.61
PCDH8-201ENST00000338862 SPANXN1Q5VSR9 72 aa11.22□□□□□ -0.61
PCDH8-201ENST00000338862 RNF182Q8N6D2 247 aa11.22□□□□□ -0.61
PCDH8-201ENST00000338862 PTPRBP23467 1997 aa11.22□□□□□ -0.61
PCDH8-201ENST00000338862 SETD2Q9BYW2 2564 aaPredicted RBP11.21□□□□□ -0.61
PCDH8-201ENST00000338862 NPYP01303 97 aa11.21□□□□□ -0.61
PCDH8-201ENST00000338862 HBDP02042 147 aa11.21□□□□□ -0.61
PCDH8-201ENST00000338862 SMAGPQ0VAQ4 97 aa11.21□□□□□ -0.61
PCDH8-201ENST00000338862 GTSF1LQ9H1H1 148 aa11.21□□□□□ -0.61
PCDH8-201ENST00000338862 A0A1B0GXF2 115 aa11.21□□□□□ -0.61
PCDH8-201ENST00000338862 CDKN1BP46527 198 aa11.21□□□□□ -0.61
PCDH8-201ENST00000338862 MAP1LC3AQ9H492 121 aa11.21□□□□□ -0.61
PCDH8-201ENST00000338862 SOX21Q9Y651 276 aaPredicted RBP11.21□□□□□ -0.61
PCDH8-201ENST00000338862 LRBAP50851 2863 aa11.21□□□□□ -0.62
PCDH8-201ENST00000338862 PSMB11A5LHX3 300 aa11.21□□□□□ -0.62
PCDH8-201ENST00000338862 GATA4P43694 442 aa11.21□□□□□ -0.62
PCDH8-201ENST00000338862 PSG3Q16557 428 aa11.21□□□□□ -0.62
PCDH8-201ENST00000338862 SCRT2Q9NQ03 307 aa11.21□□□□□ -0.62
PCDH8-201ENST00000338862 TMEM265A0A087WTH1 108 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 TRAV26-2A0A0B4J265 109 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 IGLV2-23P01705 113 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 CR1LQ2VPA4 569 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 OR1N2Q8NGR9 330 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 PTPN13Q12923 2485 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 TRBV19A0A075B6N1 114 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 MGPP08493 103 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 COX8AP10176 69 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 MFAP4P55083 255 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.2□□□□□ -0.62
PCDH8-201ENST00000338862 IGKV1-17P01599 117 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 ASCL5Q7RTU5 278 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 HIST1H4GQ99525 98 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 VGLL1Q99990 258 aa11.2□□□□□ -0.62
PCDH8-201ENST00000338862 M0R381 172 aa11.19□□□□□ -0.62
PCDH8-201ENST00000338862 MRPL51Q4U2R6 128 aaKnown RBP11.19□□□□□ -0.62
PCDH8-201ENST00000338862 FAM169BQ8N8A8 192 aa11.19□□□□□ -0.62
PCDH8-201ENST00000338862 BUB1B-PAK6H3BSN5 160 aa11.19□□□□□ -0.62
PCDH8-201ENST00000338862 SMIM13P0DJ93 91 aa11.19□□□□□ -0.62
PCDH8-201ENST00000338862 THAP8Q8NA92 274 aa11.19□□□□□ -0.62
PCDH8-201ENST00000338862 MS4A6AQ9H2W1 248 aa11.19□□□□□ -0.62
PCDH8-201ENST00000338862 C21orf62Q9NYP8 219 aa11.19□□□□□ -0.62
PCDH8-201ENST00000338862 JKAMPQ9P055 326 aa11.19□□□□□ -0.62
PCDH8-201ENST00000338862 ZNF502Q8TBZ5 544 aa11.19□□□□□ -0.62
PCDH8-201ENST00000338862 NACAE9PAV3 2078 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 CACNA1AO00555 2505 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 E7EQL1 145 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 ZC2HC1BQ5TFG8 222 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 AMTNQ6UX39 209 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 LOC107984156A0A0G2JMH3 177 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 SCGB1D4Q6XE38 83 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 ARL17AQ8IVW1 177 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 FAM57AQ8TBR7 257 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 CSMD1Q96PZ7 3565 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 NDPQ00604 133 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 TMEM155Q4W5P6 130 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 SAMD5Q5TGI4 173 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 TIMD4Q96H15 378 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 MLST8Q9BVC4 326 aa11.18□□□□□ -0.62
PCDH8-201ENST00000338862 COL25A1Q9BXS0 654 aaPredicted RBP11.18□□□□□ -0.62
PCDH8-201ENST00000338862 C19orf71A6NCJ1 209 aa11.17□□□□□ -0.62
PCDH8-201ENST00000338862 HAX1O00165 279 aa11.17□□□□□ -0.62
PCDH8-201ENST00000338862 SCGB2A1O75556 95 aa11.17□□□□□ -0.62
PCDH8-201ENST00000338862 FOXC1Q12948 553 aa11.17□□□□□ -0.62
PCDH8-201ENST00000338862 EMP1P54849 157 aa11.17□□□□□ -0.62
PCDH8-201ENST00000338862 FAM208BQ5VWN6 2430 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 SMAD7O15105 426 aaKnown RBP11.16□□□□□ -0.62
PCDH8-201ENST00000338862 NBR2O15453 112 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 ZZEF1O43149 2961 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 EGR2P11161 476 aaPredicted RBP11.16□□□□□ -0.62
PCDH8-201ENST00000338862 TEX36Q5VZQ5 186 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 ZNF492Q9P255 531 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 GAS8-AS1O95177 125 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 RPL7P18124 248 aaKnown RBP11.16□□□□□ -0.62
PCDH8-201ENST00000338862 FAM104BQ5XKR9 115 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 CLEC2AQ6UVW9 174 aa11.16□□□□□ -0.62
PCDH8-201ENST00000338862 CLEC19AQ6UXS0 136 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms