RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 G3V318 75 aa15.9■□□□□ 0.14
LINC01006-201ENST00000333319 TCAPO15273 167 aa15.9■□□□□ 0.14
LINC01006-201ENST00000333319 HLA-DMBP28068 263 aa15.9■□□□□ 0.14
LINC01006-201ENST00000333319 RELQ04864 619 aaPredicted RBP15.9■□□□□ 0.14
LINC01006-201ENST00000333319 Q6AWC8 147 aa15.9■□□□□ 0.14
LINC01006-201ENST00000333319 UQCR10Q9UDW1 63 aa15.9■□□□□ 0.14
LINC01006-201ENST00000333319 CENPVL3A0A0U1RRI6 287 aa15.89■□□□□ 0.13
LINC01006-201ENST00000333319 TMEM189A5PLL7 270 aa15.89■□□□□ 0.13
LINC01006-201ENST00000333319 SH2D1AO60880 128 aa15.89■□□□□ 0.13
LINC01006-201ENST00000333319 SPATA12Q7Z6I5 190 aa15.89■□□□□ 0.13
LINC01006-201ENST00000333319 TMEM70Q9BUB7 260 aa15.89■□□□□ 0.13
LINC01006-201ENST00000333319 PRR25Q96S07 402 aa15.89■□□□□ 0.13
LINC01006-201ENST00000333319 SPTAN1Q13813 2472 aaKnown RBP15.88■□□□□ 0.13
LINC01006-201ENST00000333319 A0A1B0GW15 77 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 IGHG4P01861 327 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 CSN3P07498 182 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 SAPCD1Q5SSQ6 148 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 LINC00173Q6ZV60 143 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 ARL6IP6Q8N6S5 226 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 Q8TAT8 98 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 VGLL1Q99990 258 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 ZFHX3Q15911 3703 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 LEPROTL1O95214 131 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 S100A7P31151 101 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 BATFQ16520 125 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 KLHDC1Q8N7A1 406 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 GATD1Q8NB37 220 aa15.88■□□□□ 0.13
LINC01006-201ENST00000333319 IGHV4-39P01824 125 aa15.87■□□□□ 0.13
LINC01006-201ENST00000333319 LYZL1Q6UWQ5 148 aa15.87■□□□□ 0.13
LINC01006-201ENST00000333319 ZFAND3Q9H8U3 227 aa15.87■□□□□ 0.13
LINC01006-201ENST00000333319 VPS13CQ709C8 3753 aa15.87■□□□□ 0.13
LINC01006-201ENST00000333319 KLK9Q2XQG4 91 aa15.87■□□□□ 0.13
LINC01006-201ENST00000333319 CLEC19AQ6UXS0 136 aa15.87■□□□□ 0.13
LINC01006-201ENST00000333319 KLK9Q9UKQ9 250 aa15.87■□□□□ 0.13
LINC01006-201ENST00000333319 TRAV9-2A0A087WT02 112 aa15.86■□□□□ 0.13
LINC01006-201ENST00000333319 Q6ZN92 141 aa15.86■□□□□ 0.13
LINC01006-201ENST00000333319 COX8CQ7Z4L0 72 aa15.86■□□□□ 0.13
LINC01006-201ENST00000333319 CCDC140Q96MF4 163 aa15.86■□□□□ 0.13
LINC01006-201ENST00000333319 IGHV3OR16-10A0A075B7F0 116 aa15.85■□□□□ 0.13
LINC01006-201ENST00000333319 GOSR1O95249 250 aa15.85■□□□□ 0.13
LINC01006-201ENST00000333319 BUB3O43684 328 aa15.85■□□□□ 0.13
LINC01006-201ENST00000333319 RPLP1P05386 114 aaKnown RBP15.85■□□□□ 0.13
LINC01006-201ENST00000333319 TMEM219Q86XT9 240 aa15.85■□□□□ 0.13
LINC01006-201ENST00000333319 IGHV3-66A0A0C4DH42 116 aa15.84■□□□□ 0.13
LINC01006-201ENST00000333319 TMEM213A2RRL7 107 aa15.84■□□□□ 0.13
LINC01006-201ENST00000333319 FBLL1A6NHQ2 334 aaKnown RBP15.84■□□□□ 0.13
LINC01006-201ENST00000333319 CRXO43186 299 aaPredicted RBP15.84■□□□□ 0.13
LINC01006-201ENST00000333319 ZNF80P51504 273 aaPredicted RBP15.84■□□□□ 0.13
LINC01006-201ENST00000333319 C5orf56Q8N8D9 126 aa15.84■□□□□ 0.13
LINC01006-201ENST00000333319 SYS1-DBNDD2H3BUS1 97 aa15.84■□□□□ 0.13
LINC01006-201ENST00000333319 ZNF493Q6ZR52 646 aa15.84■□□□□ 0.13
LINC01006-201ENST00000333319 MUC21A0A0G2JKD1 596 aa15.83■□□□□ 0.13
LINC01006-201ENST00000333319 MUC21A0A140T8X8 626 aa15.83■□□□□ 0.13
LINC01006-201ENST00000333319 IGLL1P15814 213 aa15.83■□□□□ 0.13
LINC01006-201ENST00000333319 HNRNPA3P51991 378 aaKnown RBP15.83■□□□□ 0.13
LINC01006-201ENST00000333319 MUC21Q5SSG8 566 aa15.83■□□□□ 0.13
LINC01006-201ENST00000333319 ABCA2Q9BZC7 2435 aa15.83■□□□□ 0.12
LINC01006-201ENST00000333319 IGHV3OR16-13A0A075B7E8 117 aa15.83■□□□□ 0.12
LINC01006-201ENST00000333319 IGHV3-74A0A0B4J1X5 117 aa15.83■□□□□ 0.12
LINC01006-201ENST00000333319 OR5AL1P0C617 328 aa15.83■□□□□ 0.12
LINC01006-201ENST00000333319 RAB9AP51151 201 aa15.83■□□□□ 0.12
LINC01006-201ENST00000333319 EEF1AKMT3Q96AZ1 226 aa15.83■□□□□ 0.12
LINC01006-201ENST00000333319 CLPSL1A2RUU4 121 aa15.82■□□□□ 0.12
LINC01006-201ENST00000333319 OR4C46A6NHA9 309 aa15.82■□□□□ 0.12
LINC01006-201ENST00000333319 BMI1P35226 326 aa15.82■□□□□ 0.12
LINC01006-201ENST00000333319 PAX8Q06710 450 aa15.82■□□□□ 0.12
LINC01006-201ENST00000333319 ERCC8Q13216 396 aa15.82■□□□□ 0.12
LINC01006-201ENST00000333319 DMRTA1Q5VZB9 504 aa15.82■□□□□ 0.12
LINC01006-201ENST00000333319 RNF182Q8N6D2 247 aa15.82■□□□□ 0.12
LINC01006-201ENST00000333319 TIMM8BQ9Y5J9 83 aaPredicted RBP15.82■□□□□ 0.12
LINC01006-201ENST00000333319 PKD1L2Q7Z442 2459 aa15.81■□□□□ 0.12
LINC01006-201ENST00000333319 CELSR1Q9NYQ6 3014 aa15.81■□□□□ 0.12
LINC01006-201ENST00000333319 C20orf202A1L168 122 aa15.81■□□□□ 0.12
LINC01006-201ENST00000333319 PRAC2D3DTV9 90 aa15.81■□□□□ 0.12
LINC01006-201ENST00000333319 G0S2P27469 103 aa15.81■□□□□ 0.12
LINC01006-201ENST00000333319 AP5S1Q9NUS5 200 aa15.81■□□□□ 0.12
LINC01006-201ENST00000333319 A0A087X0K7 114 aa15.8■□□□□ 0.12
LINC01006-201ENST00000333319 TRBV7-1A0A0A6YYK4 115 aa15.8■□□□□ 0.12
LINC01006-201ENST00000333319 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.8■□□□□ 0.12
LINC01006-201ENST00000333319 BRD3OSQ6XYD6 125 aa15.8■□□□□ 0.12
LINC01006-201ENST00000333319 AMN1Q8IY45 258 aa15.8■□□□□ 0.12
LINC01006-201ENST00000333319 PRSS3P2Q8NHM4 247 aa15.8■□□□□ 0.12
LINC01006-201ENST00000333319 IGHV3-49A0A0A0MS15 119 aa15.8■□□□□ 0.12
LINC01006-201ENST00000333319 D6R8Y8 96 aa15.8■□□□□ 0.12
LINC01006-201ENST00000333319 MAP1LC3CQ9BXW4 147 aa15.8■□□□□ 0.12
LINC01006-201ENST00000333319 LINC00527Q9UJ94 153 aa15.8■□□□□ 0.12
LINC01006-201ENST00000333319 ZNF207O43670 478 aaKnown RBP15.79■□□□□ 0.12
LINC01006-201ENST00000333319 FAM104BQ5XKR9 115 aa15.79■□□□□ 0.12
LINC01006-201ENST00000333319 CYB5R2Q6BCY4 276 aa15.79■□□□□ 0.12
LINC01006-201ENST00000333319 MOB4Q9Y3A3 225 aa15.79■□□□□ 0.12
LINC01006-201ENST00000333319 COL12A1Q99715 3063 aa15.79■□□□□ 0.12
LINC01006-201ENST00000333319 ZNF25P17030 456 aaPredicted RBP15.79■□□□□ 0.12
LINC01006-201ENST00000333319 TSPOP30536 169 aa15.79■□□□□ 0.12
LINC01006-201ENST00000333319 RPS20P60866 119 aaKnown RBP15.79■□□□□ 0.12
LINC01006-201ENST00000333319 FA2HQ7L5A8 372 aa15.79■□□□□ 0.12
LINC01006-201ENST00000333319 FER1L6-AS1Q8NA97 138 aa15.79■□□□□ 0.12
LINC01006-201ENST00000333319 HSPB8Q9UJY1 196 aa15.79■□□□□ 0.12
LINC01006-201ENST00000333319 IGHV1-69DA0A0B4J2H0 117 aa15.78■□□□□ 0.12
LINC01006-201ENST00000333319 IGHV4-61A0A0C4DH41 118 aa15.78■□□□□ 0.12
LINC01006-201ENST00000333319 IGHV1-69P01742 117 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 768.1 ms