RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 C20orf173Q96LM9 149 aa9.08□□□□□ -0.96
TRIM49B-201ENST00000332682 CARHSP1Q9Y2V2 147 aaKnown RBP9.08□□□□□ -0.96
TRIM49B-201ENST00000332682 TRBV20OR9-2A0A075B6H5 130 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 ZNF705FA8MVS1 300 aaPredicted RBP9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 DIRC3C9JPN6 131 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 K7EQG2 157 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 TSPAN4O14817 238 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 SAP30O75446 220 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 PRB4P10163 310 aaPredicted RBP9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 S100A1P23297 94 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 AKR1C3P42330 323 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 RPL35P42766 123 aaKnown RBP9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 SHISA2Q6UWI4 295 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 ARL6IP6Q8N6S5 226 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 SPATA3Q8NHX4 192 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 LINC00479Q96M42 142 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 SMIM7Q9BQ49 75 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 CLEC5AQ9NY25 188 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 PRELID1Q9Y255 219 aa9.07□□□□□ -0.96
TRIM49B-201ENST00000332682 ZNF727A8MUV8 499 aa9.06□□□□□ -0.96
TRIM49B-201ENST00000332682 CSN1S1P47710 185 aa9.06□□□□□ -0.96
TRIM49B-201ENST00000332682 TFPI2P48307 235 aa9.06□□□□□ -0.96
TRIM49B-201ENST00000332682 PSG3Q16557 428 aa9.06□□□□□ -0.96
TRIM49B-201ENST00000332682 LCN12Q6JVE5 192 aa9.06□□□□□ -0.96
TRIM49B-201ENST00000332682 RBPMS2Q6ZRY4 209 aaKnown RBP9.06□□□□□ -0.96
TRIM49B-201ENST00000332682 GOLT1AQ6ZVE7 132 aa9.06□□□□□ -0.96
TRIM49B-201ENST00000332682 WFDC3Q8IUB2 231 aa9.06□□□□□ -0.96
TRIM49B-201ENST00000332682 LURAP1LQ8IV03 231 aa9.06□□□□□ -0.96
TRIM49B-201ENST00000332682 FAM24BQ8N5W8 94 aa9.06□□□□□ -0.96
TRIM49B-201ENST00000332682 TRAV2A0A0B4J234 112 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 TRAV25A0A0B4J276 109 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 PRAC2D3DTV9 90 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 DNASE2O00115 360 aaPredicted RBP9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 IGLV1-51P01701 117 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 CNN1P51911 297 aaKnown RBP9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 PAFAH1B2P68402 229 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 GUCA2BQ16661 112 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 FAM74A3Q4VXF1 159 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 NIPSNAP3BQ9BS92 247 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 KLF12Q9Y4X4 402 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 IGKV2-40A0A087WW87 121 aaPredicted RBP9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 TRAV8-1A0A0A6YYK1 113 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 TRAV34A0A0B4J273 112 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 SERTM2A0A1B0GWG4 89 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 IZUMO1RA6ND01 250 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 IGKV2D-40P01614 121 aaPredicted RBP9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 APOC3P02656 99 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 ZNF688P0C7X2 276 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 ID1P41134 155 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 TMEM183BQ1AE95 376 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 ZNF738Q8NE65 137 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 SGK494Q96LW2 274 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 IGF2BP2-AS1Q96M15 143 aa9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 SPAG8Q99932 426 aaPredicted RBP9.05□□□□□ -0.96
TRIM49B-201ENST00000332682 C9JCJ5 164 aa9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 K7EQM0 130 aa9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 TAS2R60P59551 318 aa9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 UBE2G1P62253 170 aa9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 CENPWQ5EE01 88 aa9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 Q86TA4 180 aa9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 TMEM75Q8N9X5 138 aa9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 FMC1Q96HJ9 113 aa9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 NAT8Q9UHE5 227 aa9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 SORL1Q92673 2214 aa9.04□□□□□ -0.96
TRIM49B-201ENST00000332682 NOTCH3Q9UM47 2321 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 RBAKDNA6NC62 111 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 PGPEP1LA6NFU8 196 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 DEFB1P60022 68 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 TMEM241Q24JQ0 296 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 PSMG4Q5JS54 123 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 WFDC9Q8NEX5 89 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 OR2K2Q8NGT1 345 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 VGLL1Q99990 258 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 KRTAP3-3Q9BYR6 98 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 SDF2L1Q9HCN8 221 aa9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 ZNF256Q9Y2P7 627 aaPredicted RBP9.03□□□□□ -0.96
TRIM49B-201ENST00000332682 TRBV6-1A0A0K0K1D8 114 aa9.02□□□□□ -0.97
TRIM49B-201ENST00000332682 OR4C46A6NHA9 309 aa9.02□□□□□ -0.97
TRIM49B-201ENST00000332682 LTAP01374 205 aa9.02□□□□□ -0.97
TRIM49B-201ENST00000332682 S100A9P06702 114 aaKnown RBP9.02□□□□□ -0.97
TRIM49B-201ENST00000332682 CD33P20138 364 aa9.02□□□□□ -0.97
TRIM49B-201ENST00000332682 GNG4P50150 75 aa9.02□□□□□ -0.97
TRIM49B-201ENST00000332682 FLI1Q01543 452 aaPredicted RBP9.02□□□□□ -0.97
TRIM49B-201ENST00000332682 LINC01551Q86U37 167 aa9.02□□□□□ -0.97
TRIM49B-201ENST00000332682 SVBPQ8N300 66 aa9.02□□□□□ -0.97
TRIM49B-201ENST00000332682 F6UB75 175 aa9.01□□□□□ -0.97
TRIM49B-201ENST00000332682 IGLV2-8P01709 118 aa9.01□□□□□ -0.97
TRIM49B-201ENST00000332682 INSL3P51460 131 aa9.01□□□□□ -0.97
TRIM49B-201ENST00000332682 RPL23P62829 140 aaKnown RBP9.01□□□□□ -0.97
TRIM49B-201ENST00000332682 PNRC1Q12796 327 aaPredicted RBP9.01□□□□□ -0.97
TRIM49B-201ENST00000332682 BAGE2Q86Y30 109 aa9.01□□□□□ -0.97
TRIM49B-201ENST00000332682 Q8TAT8 98 aa9.01□□□□□ -0.97
TRIM49B-201ENST00000332682 TVP23CQ96ET8 276 aa9.01□□□□□ -0.97
TRIM49B-201ENST00000332682 MDFIQ99750 246 aa9.01□□□□□ -0.97
TRIM49B-201ENST00000332682 AURKAIP1Q9NWT8 199 aaPredicted RBP9.01□□□□□ -0.97
TRIM49B-201ENST00000332682 PSG8Q9UQ74 426 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms